RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W STE14P32584 239 aa5.83□□□□□ -1.48
ATG4YNL223W YPT52P36018 234 aaKnown RBP5.83□□□□□ -1.48
ATG4YNL223W FTH1P38310 465 aa5.83□□□□□ -1.48
ATG4YNL223W RPS14BP39516 138 aaKnown RBP5.83□□□□□ -1.48
ATG4YNL223W SER33P40510 469 aa5.83□□□□□ -1.48
ATG4YNL223W NAS6P50086 228 aa5.83□□□□□ -1.48
ATG4YNL223W YPT32P51996 222 aaKnown RBP5.83□□□□□ -1.48
ATG4YNL223W HOT1Q03213 719 aa5.83□□□□□ -1.48
ATG4YNL223W HFD1Q04458 532 aa5.83□□□□□ -1.48
ATG4YNL223W YMR111CQ04461 462 aaPredicted RBP5.83□□□□□ -1.48
ATG4YNL223W ATG26Q06321 1198 aa5.83□□□□□ -1.48
ATG4YNL223W ASA1Q06822 443 aa5.83□□□□□ -1.48
ATG4YNL223W HUA2Q12134 243 aa5.83□□□□□ -1.48
ATG4YNL223W MCD1Q12158 566 aa5.83□□□□□ -1.48
ATG4YNL223W YPR015CQ12531 247 aa5.83□□□□□ -1.48
ATG4YNL223W MPD2Q99316 277 aa5.83□□□□□ -1.48
ATG4YNL223W HIS5P07172 385 aa5.82□□□□□ -1.48
ATG4YNL223W CPA1P07258 411 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W MET8P15807 274 aa5.82□□□□□ -1.48
ATG4YNL223W PHO81P17442 1178 aa5.82□□□□□ -1.48
ATG4YNL223W YCK2P23292 546 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W IMG2P25642 146 aaPredicted RBP5.82□□□□□ -1.48
ATG4YNL223W RFA2P26754 273 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W COX13P32799 129 aa5.82□□□□□ -1.48
ATG4YNL223W YKL100CP34248 587 aa5.82□□□□□ -1.48
ATG4YNL223W CAF4P36130 643 aa5.82□□□□□ -1.48
ATG4YNL223W IML3P38265 245 aa5.82□□□□□ -1.48
ATG4YNL223W GIP4P39732 760 aa5.82□□□□□ -1.48
ATG4YNL223W YER034WP40022 185 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W ARB1P40024 610 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W EMP65P40085 556 aa5.82□□□□□ -1.48
ATG4YNL223W SEC27P41811 889 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W DIM1P41819 318 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W PTR3P43606 678 aa5.82□□□□□ -1.48
ATG4YNL223W NNF1P47149 201 aa5.82□□□□□ -1.48
ATG4YNL223W YJR142WP47173 342 aa5.82□□□□□ -1.48
ATG4YNL223W COS6P53344 381 aa5.82□□□□□ -1.48
ATG4YNL223W PRP38Q00723 242 aaPredicted RBP5.82□□□□□ -1.48
ATG4YNL223W CCE1Q03702 353 aa5.82□□□□□ -1.48
ATG4YNL223W RPC11Q04307 110 aaPredicted RBP5.82□□□□□ -1.48
ATG4YNL223W BCH1Q05029 724 aa5.82□□□□□ -1.48
ATG4YNL223W RAD34Q06665 692 aa5.82□□□□□ -1.48
ATG4YNL223W SGT1Q08446 395 aa5.82□□□□□ -1.48
ATG4YNL223W UAF30Q08747 228 aa5.82□□□□□ -1.48
ATG4YNL223W SLF1Q12034 447 aaKnown RBP5.82□□□□□ -1.48
ATG4YNL223W NSL1Q12143 216 aa5.82□□□□□ -1.48
ATG4YNL223W PST1Q12355 444 aa5.82□□□□□ -1.48
ATG4YNL223W HXK2P04807 486 aaKnown RBP5.81□□□□□ -1.48
ATG4YNL223W SWI5P08153 709 aa5.81□□□□□ -1.48
ATG4YNL223W CCA1P21269 546 aa5.81□□□□□ -1.48
ATG4YNL223W PHO84P25297 587 aaKnown RBP5.81□□□□□ -1.48
ATG4YNL223W RSC6P25632 483 aa5.81□□□□□ -1.48
ATG4YNL223W CSM1P25651 190 aa5.81□□□□□ -1.48
ATG4YNL223W PPZ1P26570 692 aa5.81□□□□□ -1.48
ATG4YNL223W CRM1P30822 1084 aaKnown RBP5.81□□□□□ -1.48
ATG4YNL223W TFC1P32367 649 aa5.81□□□□□ -1.48
ATG4YNL223W SDH3P33421 198 aa5.81□□□□□ -1.48
ATG4YNL223W GMH1P36125 273 aa5.81□□□□□ -1.48
ATG4YNL223W CYC2P38909 366 aa5.81□□□□□ -1.48
ATG4YNL223W UTP18P40362 594 aaPredicted RBP5.81□□□□□ -1.48
ATG4YNL223W MPS3P47069 682 aa5.81□□□□□ -1.48
ATG4YNL223W MTO1P53070 669 aa5.81□□□□□ -1.48
ATG4YNL223W HST3P53687 447 aa5.81□□□□□ -1.48
ATG4YNL223W HMO1Q03973 246 aaKnown RBP5.81□□□□□ -1.48
ATG4YNL223W HSP31Q04432 237 aa5.81□□□□□ -1.48
ATG4YNL223W YDR124WQ04608 324 aa5.81□□□□□ -1.48
ATG4YNL223W GGA1Q06336 557 aa5.81□□□□□ -1.48
ATG4YNL223W PSR1Q07800 427 aa5.81□□□□□ -1.48
ATG4YNL223W SUC2P00724 532 aa5.8□□□□□ -1.48
ATG4YNL223W TPK2P06245 380 aa5.8□□□□□ -1.48
ATG4YNL223W FUM1P08417 488 aaKnown RBP5.8□□□□□ -1.48
ATG4YNL223W RSR1P13856 272 aa5.8□□□□□ -1.48
ATG4YNL223W OCA4P25366 362 aa5.8□□□□□ -1.48
ATG4YNL223W CIN8P27895 1000 aa5.8□□□□□ -1.48
ATG4YNL223W ATP11P32453 318 aa5.8□□□□□ -1.48
ATG4YNL223W DPH5P32469 300 aaPredicted RBP5.8□□□□□ -1.48
ATG4YNL223W CBF5P33322 483 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
ATG4YNL223W RMA1P36001 430 aaKnown RBP5.8□□□□□ -1.48
ATG4YNL223W SOL2P37262 315 aa5.8□□□□□ -1.48
ATG4YNL223W PDX3P38075 228 aaKnown RBP5.8□□□□□ -1.48
ATG4YNL223W IST2P38250 946 aa5.8□□□□□ -1.48
ATG4YNL223W UBA4P38820 440 aa5.8□□□□□ -1.48
ATG4YNL223W IMA5P40884 581 aa5.8□□□□□ -1.48
ATG4YNL223W YGL176CP46945 554 aa5.8□□□□□ -1.48
ATG4YNL223W MTR3P48240 250 aaPredicted RBP5.8□□□□□ -1.48
ATG4YNL223W DIA3P52290 468 aa5.8□□□□□ -1.48
ATG4YNL223W TDA7P53882 636 aaPredicted RBP5.8□□□□□ -1.48
ATG4YNL223W YVH1Q02256 364 aaKnown RBP5.8□□□□□ -1.48
ATG4YNL223W ARX1Q03862 593 aaKnown RBP5.8□□□□□ -1.48
ATG4YNL223W DAP1Q12091 152 aa5.8□□□□□ -1.48
ATG4YNL223W YVC1Q12324 675 aa5.8□□□□□ -1.48
ATG4YNL223W JLP1Q12358 412 aa5.8□□□□□ -1.48
ATG4YNL223W ADF1Q2V2Q1 113 aa5.8□□□□□ -1.48
ATG4YNL223W YKL018C-AQ3E7A7 99 aa5.8□□□□□ -1.48
ATG4YNL223W TY4A-HQ6Q5P6 413 aa5.8□□□□□ -1.48
ATG4YNL223W NHA1Q99271 985 aa5.8□□□□□ -1.48
ATG4YNL223W CCH1P50077 2039 aa5.8□□□□□ -1.48
ATG4YNL223W STE3P06783 470 aa5.79□□□□□ -1.48
ATG4YNL223W YAK1P14680 807 aa5.79□□□□□ -1.48
ATG4YNL223W YSR3P23501 404 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms