RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W YGR127WP53275 312 aa3.33□□□□□ -1.88
SRP1YNL189W DUG3P53871 357 aa3.33□□□□□ -1.88
SRP1YNL189W MRPL19P53875 158 aa3.33□□□□□ -1.88
SRP1YNL189W YMR254CQ04838 102 aa3.33□□□□□ -1.88
SRP1YNL189W TSR2Q06672 205 aaKnown RBP3.33□□□□□ -1.88
SRP1YNL189W CDC31P06704 161 aaKnown RBP3.33□□□□□ -1.88
SRP1YNL189W PEP4P07267 405 aaKnown RBP3.33□□□□□ -1.88
SRP1YNL189W HNM1P19807 563 aa3.33□□□□□ -1.88
SRP1YNL189W WBP1P33767 430 aaKnown RBP3.33□□□□□ -1.88
SRP1YNL189W ERG7P38604 731 aa3.33□□□□□ -1.88
SRP1YNL189W AIM22P47051 409 aa3.33□□□□□ -1.88
SRP1YNL189W PET130P47065 347 aa3.33□□□□□ -1.88
SRP1YNL189W YVH1Q02256 364 aaKnown RBP3.33□□□□□ -1.88
SRP1YNL189W SRL1Q08673 210 aa3.33□□□□□ -1.88
SRP1YNL189W RTP1Q12751 981 aa3.33□□□□□ -1.88
SRP1YNL189W FOB1O13329 566 aa3.32□□□□□ -1.88
SRP1YNL189W PHD1P36093 366 aa3.32□□□□□ -1.88
SRP1YNL189W KEL1P38853 1164 aaKnown RBP3.32□□□□□ -1.88
SRP1YNL189W YND1P40009 630 aa3.32□□□□□ -1.88
SRP1YNL189W YIL169CP40442 995 aa3.32□□□□□ -1.88
SRP1YNL189W SNG1P46950 547 aa3.32□□□□□ -1.88
SRP1YNL189W YGR066CP53242 292 aa3.32□□□□□ -1.88
SRP1YNL189W YDR239CQ03780 787 aa3.32□□□□□ -1.88
SRP1YNL189W TAF11Q04226 346 aa3.32□□□□□ -1.88
SRP1YNL189W AVL9Q12500 764 aa3.32□□□□□ -1.88
SRP1YNL189W BAR1P12630 587 aa3.31□□□□□ -1.88
SRP1YNL189W PMS1P14242 873 aa3.31□□□□□ -1.88
SRP1YNL189W CKA1P15790 372 aa3.31□□□□□ -1.88
SRP1YNL189W OCA4P25366 362 aa3.31□□□□□ -1.88
SRP1YNL189W GPI10P30777 616 aa3.31□□□□□ -1.88
SRP1YNL189W LAG1P38703 411 aa3.31□□□□□ -1.88
SRP1YNL189W MSR1P38714 643 aa3.31□□□□□ -1.88
SRP1YNL189W CIN4P39110 191 aa3.31□□□□□ -1.88
SRP1YNL189W MET18P40469 1032 aa3.31□□□□□ -1.88
SRP1YNL189W AZF1P41696 914 aa3.31□□□□□ -1.88
SRP1YNL189W IAH1P41734 238 aa3.31□□□□□ -1.88
SRP1YNL189W YGR126WP53274 230 aa3.31□□□□□ -1.88
SRP1YNL189W SEC5P89102 971 aa3.31□□□□□ -1.88
SRP1YNL189W YMR087WQ04299 284 aa3.31□□□□□ -1.88
SRP1YNL189W FMP45Q07651 309 aa3.31□□□□□ -1.88
SRP1YNL189W PDH1Q12428 516 aaKnown RBP3.31□□□□□ -1.88
SRP1YNL189W HSH49Q99181 213 aaPredicted RBP3.31□□□□□ -1.88
SRP1YNL189W DFR1P07807 211 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SRP1YNL189W ROX1P25042 368 aa3.3□□□□□ -1.88
SRP1YNL189W PRD1P25375 712 aa3.3□□□□□ -1.88
SRP1YNL189W SPC34P36131 295 aa3.3□□□□□ -1.88
SRP1YNL189W CST26P38226 397 aa3.3□□□□□ -1.88
SRP1YNL189W AXL1P40851 1208 aa3.3□□□□□ -1.88
SRP1YNL189W GUF1P46943 645 aa3.3□□□□□ -1.88
SRP1YNL189W SSK1Q07084 712 aa3.3□□□□□ -1.88
SRP1YNL189W ETT1Q08421 412 aaKnown RBP3.3□□□□□ -1.88
SRP1YNL189W CSR2Q12734 1121 aa3.3□□□□□ -1.88
SRP1YNL189W PGA3Q12746 312 aaKnown RBP3.3□□□□□ -1.88
SRP1YNL189W RAD52P06778 471 aaKnown RBP3.3□□□□□ -1.88
SRP1YNL189W GLN3P18494 730 aa3.3□□□□□ -1.88
SRP1YNL189W SNC1P31109 117 aa3.3□□□□□ -1.88
SRP1YNL189W MRE11P32829 692 aa3.3□□□□□ -1.88
SRP1YNL189W PMT1P33775 817 aa3.3□□□□□ -1.88
SRP1YNL189W ARF3P40994 183 aaRIP-Chip data3.3□□□□□ -1.88not detected
SRP1YNL189W SHR3Q02774 210 aa3.3□□□□□ -1.88
SRP1YNL189W YMR160WQ03823 816 aa3.3□□□□□ -1.88
SRP1YNL189W YDR415CQ04033 374 aaPredicted RBP3.3□□□□□ -1.88
SRP1YNL189W RBA50Q04418 439 aa3.3□□□□□ -1.88
SRP1YNL189W FMP42Q04991 504 aa3.3□□□□□ -1.88
SRP1YNL189W RSF1Q05043 376 aa3.3□□□□□ -1.88
SRP1YNL189W MRD1Q06106 887 aaKnown RBP3.3□□□□□ -1.88
SRP1YNL189W YOR365CQ08844 703 aa3.3□□□□□ -1.88
SRP1YNL189W GRX6Q12438 231 aa3.3□□□□□ -1.88
SRP1YNL189W YOL159C-AQ3E769 90 aa3.3□□□□□ -1.88
SRP1YNL189W ACH1P32316 526 aa3.29□□□□□ -1.88
SRP1YNL189W RAD24P32641 659 aa3.29□□□□□ -1.88
SRP1YNL189W YME1P32795 747 aa3.29□□□□□ -1.88
SRP1YNL189W ROK1P45818 564 aaPredicted RBP3.29□□□□□ -1.88
SRP1YNL189W JJJ1P53863 590 aa3.29□□□□□ -1.88
SRP1YNL189W TDA7P53882 636 aaPredicted RBP3.29□□□□□ -1.88
SRP1YNL189W RHO4Q00246 291 aa3.29□□□□□ -1.88
SRP1YNL189W TOF2Q02208 771 aa3.29□□□□□ -1.88
SRP1YNL189W PEP5P12868 1029 aa3.28□□□□□ -1.88
SRP1YNL189W PPZ1P26570 692 aa3.28□□□□□ -1.88
SRP1YNL189W SEC1P30619 724 aaKnown RBP3.28□□□□□ -1.88
SRP1YNL189W ERG1P32476 496 aaKnown RBP3.28□□□□□ -1.88
SRP1YNL189W YHR210CP38893 341 aa3.28□□□□□ -1.88
SRP1YNL189W TIF4631P39935 952 aaKnown RBP3.28□□□□□ -1.88
SRP1YNL189W ATG27P46989 271 aa3.28□□□□□ -1.88
SRP1YNL189W CAF130P53280 1122 aaPredicted RBP3.28□□□□□ -1.88
SRP1YNL189W LSC1P53598 329 aaKnown RBP3.28□□□□□ -1.88
SRP1YNL189W MSS11Q03825 758 aa3.28□□□□□ -1.88
SRP1YNL189W SYF1Q04048 859 aaPredicted RBP3.28□□□□□ -1.88
SRP1YNL189W CDC45Q08032 650 aa3.28□□□□□ -1.88
SRP1YNL189W THP1Q08231 455 aa3.28□□□□□ -1.88
SRP1YNL189W RED1P14291 827 aa3.27□□□□□ -1.89
SRP1YNL189W ERG3P32353 365 aa3.27□□□□□ -1.89
SRP1YNL189W MSN2P33748 704 aa3.27□□□□□ -1.89
SRP1YNL189W YKL023WP36103 277 aaKnown RBP3.27□□□□□ -1.89
SRP1YNL189W TCM62P38228 572 aaKnown RBP3.27□□□□□ -1.89
SRP1YNL189W VID24P38263 362 aa3.27□□□□□ -1.89
SRP1YNL189W YGR250CP53316 781 aaKnown RBP3.27□□□□□ -1.89
SRP1YNL189W KTR5P53966 522 aaPredicted RBP3.27□□□□□ -1.89
SRP1YNL189W SAM50P53969 484 aa3.27□□□□□ -1.89
SRP1YNL189W YLR352WQ06479 807 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms