RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W SMM1P53720 384 aaKnown RBP2.65□□□□□ -1.99
DDR48YMR173W MSC1Q03104 513 aa2.65□□□□□ -1.99
DDR48YMR173W ADD37Q03233 198 aa2.65□□□□□ -1.99
DDR48YMR173W SNO4Q04902 237 aa2.65□□□□□ -1.99
DDR48YMR173W GLO2Q05584 274 aa2.65□□□□□ -1.99
DDR48YMR173W ECM30Q06673 1274 aa2.65□□□□□ -1.99
DDR48YMR173W SYO1Q07395 620 aa2.65□□□□□ -1.99
DDR48YMR173W HSP33Q08914 237 aaKnown RBP2.65□□□□□ -1.99
DDR48YMR173W HSP32Q08992 237 aa2.65□□□□□ -1.99
DDR48YMR173W YDL009CQ12210 107 aa2.65□□□□□ -1.99
DDR48YMR173W CAR1P00812 333 aaKnown RBP2.64□□□□□ -1.99
DDR48YMR173W APE1P14904 514 aa2.64□□□□□ -1.99
DDR48YMR173W YCR007CP25354 239 aa2.64□□□□□ -1.99
DDR48YMR173W SLC1P33333 303 aa2.64□□□□□ -1.99
DDR48YMR173W YBL055CP34220 418 aaPredicted RBP2.64□□□□□ -1.99
DDR48YMR173W PMU1P36069 295 aa2.64□□□□□ -1.99
DDR48YMR173W YKL023WP36103 277 aaKnown RBP2.64□□□□□ -1.99
DDR48YMR173W MRPL4P36517 319 aa2.64□□□□□ -1.99
DDR48YMR173W OSH3P38713 996 aaKnown RBP2.64□□□□□ -1.99
DDR48YMR173W VPS52P39904 641 aa2.64□□□□□ -1.99
DDR48YMR173W YJR154WP47181 346 aa2.64□□□□□ -1.99
DDR48YMR173W YGR127WP53275 312 aa2.64□□□□□ -1.99
DDR48YMR173W MSO1P53604 210 aaKnown RBP2.64□□□□□ -1.99
DDR48YMR173W YOR365CQ08844 703 aa2.64□□□□□ -1.99
DDR48YMR173W RNA14P25298 677 aaKnown RBP2.63□□□□□ -1.99
DDR48YMR173W BOS1P25385 244 aa2.63□□□□□ -1.99
DDR48YMR173W PUT3P25502 979 aaPredicted RBP2.63□□□□□ -1.99
DDR48YMR173W KTR3P38130 404 aaPredicted RBP2.63□□□□□ -1.99
DDR48YMR173W SHR3Q02774 210 aa2.63□□□□□ -1.99
DDR48YMR173W BSC6Q08280 497 aa2.63□□□□□ -1.99
DDR48YMR173W HNT3Q08702 217 aa2.63□□□□□ -1.99
DDR48YMR173W NCE102Q12207 173 aaRIP-Chip data2.63□□□□□ -1.99not detected
DDR48YMR173W YCL021W-AQ96VH3 125 aa2.63□□□□□ -1.99
DDR48YMR173W SUC2P00724 532 aa2.62□□□□□ -1.99
DDR48YMR173W MRS6P32864 603 aaKnown RBP2.62□□□□□ -1.99
DDR48YMR173W RRN3P36070 627 aa2.62□□□□□ -1.99
DDR48YMR173W TUL1P36096 758 aa2.62□□□□□ -1.99
DDR48YMR173W YHR210CP38893 341 aa2.62□□□□□ -1.99
DDR48YMR173W NPR2P39923 615 aa2.62□□□□□ -1.99
DDR48YMR173W YEL068CP39977 110 aa2.62□□□□□ -1.99
DDR48YMR173W ALG8P40351 577 aa2.62□□□□□ -1.99
DDR48YMR173W TPM2P40414 161 aa2.62□□□□□ -1.99
DDR48YMR173W DPB4Q04603 196 aaKnown RBP2.62□□□□□ -1.99
DDR48YMR173W HEL2Q05580 639 aaKnown RBP2.62□□□□□ -1.99
DDR48YMR173W FUM1P08417 488 aaKnown RBP2.61□□□□□ -1.99
DDR48YMR173W LPD1P09624 499 aaKnown RBP2.61□□□□□ -1.99
DDR48YMR173W SGF29P25554 259 aa2.61□□□□□ -1.99
DDR48YMR173W RER1P25560 188 aa2.61□□□□□ -1.99
DDR48YMR173W YCR022CP25620 114 aa2.61□□□□□ -1.99
DDR48YMR173W SSE2P32590 693 aaKnown RBP2.61□□□□□ -1.99
DDR48YMR173W CIN4P39110 191 aa2.61□□□□□ -1.99
DDR48YMR173W HAT2P39984 401 aa2.61□□□□□ -1.99
DDR48YMR173W SCD6P45978 349 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
DDR48YMR173W SNG1P46950 547 aa2.61□□□□□ -1.99
DDR48YMR173W LYS4P49367 693 aaPredicted RBP2.61□□□□□ -1.99
DDR48YMR173W DRN1P53255 507 aaKnown RBP2.61□□□□□ -1.99
DDR48YMR173W BTN2P53286 410 aa2.61□□□□□ -1.99
DDR48YMR173W RLI1Q03195 608 aaKnown RBP2.61□□□□□ -1.99
DDR48YMR173W SLD5Q03406 294 aa2.61□□□□□ -1.99
DDR48YMR173W MRPL51Q06090 140 aaPredicted RBP2.61□□□□□ -1.99
DDR48YMR173W VPS74Q06385 345 aa2.61□□□□□ -1.99
DDR48YMR173W ENT4Q07872 247 aa2.61□□□□□ -1.99
DDR48YMR173W TCO89Q08921 799 aa2.61□□□□□ -1.99
DDR48YMR173W MF(ALPHA)1P01149 165 aa2.6□□□□□ -1.99
DDR48YMR173W RPL19AP0CX82 189 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W RPL19BP0CX83 189 aaPredicted RBP2.6□□□□□ -1.99
DDR48YMR173W SUI2P20459 304 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W KGD1P20967 1014 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W RPL32P38061 130 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W SHO1P40073 367 aa2.6□□□□□ -1.99
DDR48YMR173W PTR3P43606 678 aa2.6□□□□□ -1.99
DDR48YMR173W YGR126WP53274 230 aa2.6□□□□□ -1.99
DDR48YMR173W RBG2P53295 368 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W BUD32P53323 261 aa2.6□□□□□ -1.99
DDR48YMR173W ATG16Q03818 150 aa2.6□□□□□ -1.99
DDR48YMR173W VMS1Q04311 632 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W LSP1Q12230 341 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W CTF3Q12748 733 aa2.6□□□□□ -1.99
DDR48YMR173W RRP12Q12754 1228 aaKnown RBP2.6□□□□□ -1.99
DDR48YMR173W YER078W-AQ3E7A2 54 aa2.6□□□□□ -1.99
DDR48YMR173W SUP35P05453 685 aaKnown RBP2.59□□□□□ -1.99
DDR48YMR173W ARD1P07347 238 aaPredicted RBP2.59□□□□□ -1.99
DDR48YMR173W CDC24P11433 854 aaPredicted RBP2.59□□□□□ -1.99
DDR48YMR173W SPT15P13393 240 aaKnown RBP2.59□□□□□ -1.99
DDR48YMR173W IMG1P25626 169 aa2.59□□□□□ -1.99
DDR48YMR173W PWP2P25635 923 aaKnown RBP2.59□□□□□ -1.99
DDR48YMR173W UTR4P32626 227 aa2.59□□□□□ -1.99
DDR48YMR173W FRE1P32791 686 aa2.59□□□□□ -1.99
DDR48YMR173W YBR144CP34215 104 aa2.59□□□□□ -1.99
DDR48YMR173W VPS24P36095 224 aaKnown RBP2.59□□□□□ -1.99
DDR48YMR173W ICS2P38284 255 aa2.59□□□□□ -1.99
DDR48YMR173W RRT2P38332 387 aa2.59□□□□□ -1.99
DDR48YMR173W PRE5P40302 234 aaKnown RBP2.59□□□□□ -1.99
DDR48YMR173W DSD1P53095 428 aa2.59□□□□□ -1.99
DDR48YMR173W DUG3P53871 357 aa2.59□□□□□ -1.99
DDR48YMR173W YKU80Q04437 629 aa2.59□□□□□ -1.99
DDR48YMR173W PEP4P07267 405 aaKnown RBP2.58□□□□□ -2
DDR48YMR173W KAR3P17119 729 aa2.58□□□□□ -2
DDR48YMR173W EXO70P19658 623 aa2.58□□□□□ -2
DDR48YMR173W PRE8P23639 250 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms