RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeast

Gene ATG16, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG16	YMR159C	YJR112W-A	Q3E743	109 aa		4.23	□□□□□ -1.73
ATG16	YMR159C	PEP5	P12868	1029 aa		4.22	□□□□□ -1.73
ATG16	YMR159C	PMS1	P14242	873 aa		4.22	□□□□□ -1.73
ATG16	YMR159C	ART10	P18634	518 aa	Known RBP	4.22	□□□□□ -1.73
ATG16	YMR159C	RPS2	P25443	254 aa	Known RBP	4.22	□□□□□ -1.73
ATG16	YMR159C	VPS17	P32913	551 aa		4.22	□□□□□ -1.73
ATG16	YMR159C	TIF3	P34167	436 aa	Known RBP	4.22	□□□□□ -1.73
ATG16	YMR159C	MAF1	P41910	395 aa		4.22	□□□□□ -1.73
ATG16	YMR159C	YGR126W	P53274	230 aa		4.22	□□□□□ -1.73
ATG16	YMR159C	TDA7	P53882	636 aa	Predicted RBP	4.22	□□□□□ -1.73
ATG16	YMR159C	DIC1	Q06143	298 aa		4.22	□□□□□ -1.73
ATG16	YMR159C	NCE102	Q12207	173 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
ATG16	YMR159C	SGF29	P25554	259 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	AFG3	P39925	761 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	YJL068C	P40363	299 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	SNG1	P46950	547 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	ALT2	P52892	507 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	YGL260W	P53056	76 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	DSD1	P53095	428 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	LCL3	P53153	274 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	YGR066C	P53242	292 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	DUG3	P53871	357 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	CRZ1	P53968	678 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	YPL014W	Q02606	381 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	RPM2	Q02773	1202 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	SHR3	Q02774	210 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	HCR1	Q05775	265 aa	Known RBP	4.21	□□□□□ -1.74
ATG16	YMR159C	FMP45	Q07651	309 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	CTI6	Q08923	506 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	DAP1	Q12091	152 aa		4.21	□□□□□ -1.74
ATG16	YMR159C	PDH1	Q12428	516 aa	Known RBP	4.21	□□□□□ -1.74
ATG16	YMR159C	SEF1	P34228	1148 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	ECM15	P35195	104 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	YNK1	P36010	153 aa	Known RBP	4.2	□□□□□ -1.74
ATG16	YMR159C	YHR210C	P38893	341 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	ALG5	P40350	334 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	CSM2	P40465	213 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	YJR154W	P47181	346 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	MRX6	P48564	524 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	YOR365C	Q08844	703 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	RRI2	Q12348	645 aa		4.2	□□□□□ -1.74
ATG16	YMR159C	YML002W	P0CF17	737 aa		4.19	□□□□□ -1.74
ATG16	YMR159C	MRP13	P12686	339 aa		4.19	□□□□□ -1.74
ATG16	YMR159C	UBP11	P36026	717 aa		4.19	□□□□□ -1.74
ATG16	YMR159C	FMP46	P36141	133 aa	Known RBP	4.19	□□□□□ -1.74
ATG16	YMR159C	CCT4	P39078	528 aa	Known RBP	4.19	□□□□□ -1.74
ATG16	YMR159C	FIN1	Q03898	291 aa		4.19	□□□□□ -1.74
ATG16	YMR159C	GLO2	Q05584	274 aa		4.19	□□□□□ -1.74
ATG16	YMR159C	GCN4	P03069	281 aa		4.18	□□□□□ -1.74
ATG16	YMR159C	PEP4	P07267	405 aa	Known RBP	4.18	□□□□□ -1.74
ATG16	YMR159C	PHO2	P07269	559 aa		4.18	□□□□□ -1.74
ATG16	YMR159C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
ATG16	YMR159C	CBS1	P14066	229 aa		4.18	□□□□□ -1.74
ATG16	YMR159C	ALK1	P43633	760 aa	Known RBP	4.18	□□□□□ -1.74
ATG16	YMR159C	VPS75	P53853	264 aa		4.18	□□□□□ -1.74
ATG16	YMR159C	RBA50	Q04418	439 aa		4.18	□□□□□ -1.74
ATG16	YMR159C	BUD21	Q08492	214 aa	Predicted RBP	4.18	□□□□□ -1.74
ATG16	YMR159C	AVL9	Q12500	764 aa		4.18	□□□□□ -1.74
ATG16	YMR159C	MRS3	P10566	314 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	EST1	P17214	699 aa	Predicted RBP	4.17	□□□□□ -1.74
ATG16	YMR159C	SEC62	P21825	274 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	SGV1	P23293	657 aa	Known RBP	4.17	□□□□□ -1.74
ATG16	YMR159C	PRD1	P25375	712 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	TCD2	P36101	447 aa	Known RBP	4.17	□□□□□ -1.74
ATG16	YMR159C	BUD32	P53323	261 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	IPI3	P53877	555 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	SUB1	P54000	292 aa	Known RBP	4.17	□□□□□ -1.74
ATG16	YMR159C	TOF2	Q02208	771 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	VPS38	Q05919	439 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	MED1	Q12321	566 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	YMR230W-A	Q3E7B5	62 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	SGS1	P35187	1447 aa		4.17	□□□□□ -1.74
ATG16	YMR159C	HSC82	P15108	705 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	AMD1	P15274	810 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	PDA1	P16387	420 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	SHP1	P34223	423 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	REG2	P38232	338 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	MUM2	P38236	366 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	YBR225W	P38321	900 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	DHH1	P39517	506 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	IKS1	P47042	667 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	IMD4	P50094	524 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	DRN1	P53255	507 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	ARE2	P53629	642 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	YMR087W	Q04299	284 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	ERP1	Q05359	219 aa	Known RBP	4.16	□□□□□ -1.74
ATG16	YMR159C	BNA5	Q05979	453 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	YDL057W	Q07379	328 aa		4.16	□□□□□ -1.74
ATG16	YMR159C	SUC2	P00724	532 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	APE1	P14904	514 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	MET8	P15807	274 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	ELO2	P25358	347 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	PEP3	P27801	918 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	SIP2	P34164	415 aa	Known RBP	4.15	□□□□□ -1.75
ATG16	YMR159C	OSH3	P38713	996 aa	Known RBP	4.15	□□□□□ -1.75
ATG16	YMR159C	MSR1	P38714	643 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	RTT103	Q05543	409 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	YTH1	Q06102	208 aa	Predicted RBP	4.15	□□□□□ -1.75
ATG16	YMR159C	SYO1	Q07395	620 aa		4.15	□□□□□ -1.75
ATG16	YMR159C	RLM1	Q12224	676 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms