RNA–Protein interactions for RNA: YMR094W

CTF13, Transcript of Subunit of the CBF3 complex, yeastyeast

Gene CTF13, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF13YMR094W YCR022CP25620 114 aa3.16□□□□□ -1.9
CTF13YMR094W WSC2P53832 503 aa3.16□□□□□ -1.9
CTF13YMR094W DUG3P53871 357 aa3.16□□□□□ -1.9
CTF13YMR094W SYO1Q07395 620 aa3.16□□□□□ -1.9
CTF13YMR094W RTT109Q07794 436 aa3.16□□□□□ -1.9
CTF13YMR094W DNA2P38859 1522 aa3.16□□□□□ -1.9
CTF13YMR094W ATR1P13090 542 aa3.15□□□□□ -1.91
CTF13YMR094W AMD1P15274 810 aaKnown RBP3.15□□□□□ -1.91
CTF13YMR094W TRX2P22803 104 aaKnown RBP3.15□□□□□ -1.91
CTF13YMR094W VMA16P23968 213 aa3.15□□□□□ -1.91
CTF13YMR094W ADH7P25377 361 aa3.15□□□□□ -1.91
CTF13YMR094W PRE5P40302 234 aaKnown RBP3.15□□□□□ -1.91
CTF13YMR094W SHR3Q02774 210 aa3.15□□□□□ -1.91
CTF13YMR094W VID22Q05934 901 aa3.15□□□□□ -1.91
CTF13YMR094W PEP5P12868 1029 aa3.14□□□□□ -1.91
CTF13YMR094W BUD5P25300 642 aaPredicted RBP3.14□□□□□ -1.91
CTF13YMR094W YKL100CP34248 587 aa3.14□□□□□ -1.91
CTF13YMR094W SHO1P40073 367 aa3.14□□□□□ -1.91
CTF13YMR094W ETT1Q08421 412 aaKnown RBP3.14□□□□□ -1.91
CTF13YMR094W HNT3Q08702 217 aa3.14□□□□□ -1.91
CTF13YMR094W YDL009CQ12210 107 aa3.14□□□□□ -1.91
CTF13YMR094W SSM4P40318 1319 aa3.13□□□□□ -1.91
CTF13YMR094W YEL045CP32616 141 aa3.13□□□□□ -1.91
CTF13YMR094W PSY4P38193 441 aa3.13□□□□□ -1.91
CTF13YMR094W FMP10P40098 244 aa3.13□□□□□ -1.91
CTF13YMR094W PTR3P43606 678 aa3.13□□□□□ -1.91
CTF13YMR094W AAD10P47182 288 aa3.13□□□□□ -1.91
CTF13YMR094W ALT2P52892 507 aa3.13□□□□□ -1.91
CTF13YMR094W BUD32P53323 261 aa3.13□□□□□ -1.91
CTF13YMR094W MSO1P53604 210 aaKnown RBP3.13□□□□□ -1.91
CTF13YMR094W DPB4Q04603 196 aaKnown RBP3.13□□□□□ -1.91
CTF13YMR094W ALG8P40351 577 aa3.12□□□□□ -1.91
CTF13YMR094W SNG1P46950 547 aa3.12□□□□□ -1.91
CTF13YMR094W SUB1P54000 292 aaKnown RBP3.12□□□□□ -1.91
CTF13YMR094W HEL2Q05580 639 aaKnown RBP3.12□□□□□ -1.91
CTF13YMR094W BNA5Q05979 453 aa3.12□□□□□ -1.91
CTF13YMR094W NBP2Q12163 236 aa3.12□□□□□ -1.91
CTF13YMR094W FUN19P28003 413 aaPredicted RBP3.11□□□□□ -1.91
CTF13YMR094W KAP123P40069 1113 aaKnown RBP3.11□□□□□ -1.91
CTF13YMR094W SCD6P45978 349 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
CTF13YMR094W SNO4Q04902 237 aa3.11□□□□□ -1.91
CTF13YMR094W PAL1Q05518 499 aaKnown RBP3.11□□□□□ -1.91
CTF13YMR094W MRPL51Q06090 140 aaPredicted RBP3.11□□□□□ -1.91
CTF13YMR094W ENT4Q07872 247 aa3.11□□□□□ -1.91
CTF13YMR094W HSP33Q08914 237 aaKnown RBP3.11□□□□□ -1.91
CTF13YMR094W HSP32Q08992 237 aa3.11□□□□□ -1.91
CTF13YMR094W YER078W-AQ3E7A2 54 aa3.11□□□□□ -1.91
CTF13YMR094W YOL087CQ99247 1116 aa3.11□□□□□ -1.91
CTF13YMR094W SYN8P31377 255 aa3.1□□□□□ -1.91
CTF13YMR094W SSH4P32343 579 aa3.1□□□□□ -1.91
CTF13YMR094W YKL023WP36103 277 aaKnown RBP3.1□□□□□ -1.91
CTF13YMR094W ICS2P38284 255 aa3.1□□□□□ -1.91
CTF13YMR094W YER010CP40011 234 aa3.1□□□□□ -1.91
CTF13YMR094W GTR1Q00582 310 aa3.1□□□□□ -1.91
CTF13YMR094W YML131WQ03102 365 aa3.1□□□□□ -1.91
CTF13YMR094W OPY2Q06810 360 aa3.1□□□□□ -1.91
CTF13YMR094W YOR387CQ08910 206 aa3.1□□□□□ -1.91
CTF13YMR094W BOS1P25385 244 aa3.1□□□□□ -1.91
CTF13YMR094W PUT3P25502 979 aaPredicted RBP3.1□□□□□ -1.91
CTF13YMR094W SGF29P25554 259 aa3.1□□□□□ -1.91
CTF13YMR094W FRE1P32791 686 aa3.1□□□□□ -1.91
CTF13YMR094W SLC1P33333 303 aa3.1□□□□□ -1.91
CTF13YMR094W DSD1P53095 428 aa3.1□□□□□ -1.91
CTF13YMR094W YGR127WP53275 312 aa3.1□□□□□ -1.91
CTF13YMR094W SLD5Q03406 294 aa3.1□□□□□ -1.91
CTF13YMR094W RIX7Q07844 837 aaKnown RBP3.1□□□□□ -1.91
CTF13YMR094W TCO89Q08921 799 aa3.1□□□□□ -1.91
CTF13YMR094W CTF3Q12748 733 aa3.1□□□□□ -1.91
CTF13YMR094W KGD1P20967 1014 aaKnown RBP3.09□□□□□ -1.92
CTF13YMR094W PUP3P25451 205 aaKnown RBP3.09□□□□□ -1.92
CTF13YMR094W YBL055CP34220 418 aaPredicted RBP3.09□□□□□ -1.92
CTF13YMR094W RPL32P38061 130 aaKnown RBP3.09□□□□□ -1.92
CTF13YMR094W MTC6P38849 526 aa3.09□□□□□ -1.92
CTF13YMR094W HAT2P39984 401 aa3.09□□□□□ -1.92
CTF13YMR094W LYS4P49367 693 aaPredicted RBP3.09□□□□□ -1.92
CTF13YMR094W EFM6P53970 246 aa3.09□□□□□ -1.92
CTF13YMR094W SPT15P13393 240 aaKnown RBP3.08□□□□□ -1.92
CTF13YMR094W HXT1P32465 570 aa3.08□□□□□ -1.92
CTF13YMR094W CBF2P32504 956 aa3.08□□□□□ -1.92
CTF13YMR094W RRN3P36070 627 aa3.08□□□□□ -1.92
CTF13YMR094W NUP133P36161 1157 aa3.08□□□□□ -1.92
CTF13YMR094W PTH1P38876 190 aaKnown RBP3.08□□□□□ -1.92
CTF13YMR094W NAB3P38996 802 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
CTF13YMR094W FAR3P46671 204 aa3.08□□□□□ -1.92
CTF13YMR094W YJR154WP47181 346 aa3.08□□□□□ -1.92
CTF13YMR094W YGR126WP53274 230 aa3.08□□□□□ -1.92
CTF13YMR094W BTN2P53286 410 aa3.08□□□□□ -1.92
CTF13YMR094W IRC15Q02733 499 aa3.08□□□□□ -1.92
CTF13YMR094W MSC1Q03104 513 aa3.08□□□□□ -1.92
CTF13YMR094W VPS74Q06385 345 aa3.08□□□□□ -1.92
CTF13YMR094W SSP2Q08646 371 aa3.08□□□□□ -1.92
CTF13YMR094W NCE102Q12207 173 aaRIP-Chip data3.08□□□□□ -1.92not detected
CTF13YMR094W RRP12Q12754 1228 aaKnown RBP3.08□□□□□ -1.92
CTF13YMR094W KOG1P38873 1557 aa3.07□□□□□ -1.92
CTF13YMR094W LPD1P09624 499 aaKnown RBP3.07□□□□□ -1.92
CTF13YMR094W YCR007CP25354 239 aa3.07□□□□□ -1.92
CTF13YMR094W IMG1P25626 169 aa3.07□□□□□ -1.92
CTF13YMR094W NAM9P27929 486 aa3.07□□□□□ -1.92
CTF13YMR094W DEG1P31115 442 aaKnown RBP3.07□□□□□ -1.92
CTF13YMR094W RFS1P38234 210 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms