RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YPL068CQ02749 293 aa2.14□□□□□ -2.07
SGD1YLR336C SNA4Q07549 140 aa2.14□□□□□ -2.07
SGD1YLR336C GRX6Q12438 231 aa2.14□□□□□ -2.07
SGD1YLR336C PMS1P14242 873 aa2.14□□□□□ -2.07
SGD1YLR336C YCR043CP25361 127 aa2.14□□□□□ -2.07
SGD1YLR336C GID7P25569 745 aa2.14□□□□□ -2.07
SGD1YLR336C GPI10P30777 616 aa2.14□□□□□ -2.07
SGD1YLR336C ERG3P32353 365 aa2.14□□□□□ -2.07
SGD1YLR336C ARC40P38328 384 aaKnown RBP2.14□□□□□ -2.07
SGD1YLR336C NOC2P39744 710 aaKnown RBP2.14□□□□□ -2.07
SGD1YLR336C YER130CP39959 443 aa2.14□□□□□ -2.07
SGD1YLR336C MET18P40469 1032 aa2.14□□□□□ -2.07
SGD1YLR336C ROK1P45818 564 aaPredicted RBP2.14□□□□□ -2.07
SGD1YLR336C AIM22P47051 409 aa2.14□□□□□ -2.07
SGD1YLR336C SMM1P53720 384 aaKnown RBP2.14□□□□□ -2.07
SGD1YLR336C JJJ1P53863 590 aa2.14□□□□□ -2.07
SGD1YLR336C YNL181WP53878 407 aa2.14□□□□□ -2.07
SGD1YLR336C YMR254CQ04838 102 aa2.14□□□□□ -2.07
SGD1YLR336C MRD1Q06106 887 aaKnown RBP2.14□□□□□ -2.07
SGD1YLR336C DSE3Q08729 430 aa2.14□□□□□ -2.07
SGD1YLR336C HSH49Q99181 213 aaPredicted RBP2.14□□□□□ -2.07
SGD1YLR336C PEP4P07267 405 aaKnown RBP2.13□□□□□ -2.07
SGD1YLR336C PRD1P25375 712 aa2.13□□□□□ -2.07
SGD1YLR336C MRE11P32829 692 aa2.13□□□□□ -2.07
SGD1YLR336C ERG7P38604 731 aa2.13□□□□□ -2.07
SGD1YLR336C MSR1P38714 643 aa2.13□□□□□ -2.07
SGD1YLR336C CIN4P39110 191 aa2.13□□□□□ -2.07
SGD1YLR336C DUG3P53871 357 aa2.13□□□□□ -2.07
SGD1YLR336C YVH1Q02256 364 aaKnown RBP2.13□□□□□ -2.07
SGD1YLR336C DIC1Q06143 298 aa2.13□□□□□ -2.07
SGD1YLR336C ICT1Q12385 394 aa2.13□□□□□ -2.07
SGD1YLR336C YOL159C-AQ3E769 90 aa2.13□□□□□ -2.07
SGD1YLR336C RAD52P06778 471 aaKnown RBP2.13□□□□□ -2.07
SGD1YLR336C MCM4P30665 933 aaKnown RBP2.13□□□□□ -2.07
SGD1YLR336C TMT1P32643 299 aa2.13□□□□□ -2.07
SGD1YLR336C PMT1P33775 817 aa2.13□□□□□ -2.07
SGD1YLR336C MPE1P35728 441 aaKnown RBP2.13□□□□□ -2.07
SGD1YLR336C TES1P41903 349 aaKnown RBP2.13□□□□□ -2.07
SGD1YLR336C SNG1P46950 547 aa2.13□□□□□ -2.07
SGD1YLR336C SRB7P47822 140 aa2.13□□□□□ -2.07
SGD1YLR336C YGR126WP53274 230 aa2.13□□□□□ -2.07
SGD1YLR336C YGR250CP53316 781 aaKnown RBP2.13□□□□□ -2.07
SGD1YLR336C MPS1P54199 764 aa2.13□□□□□ -2.07
SGD1YLR336C YDR239CQ03780 787 aa2.13□□□□□ -2.07
SGD1YLR336C FIN1Q03898 291 aa2.13□□□□□ -2.07
SGD1YLR336C SRL1Q08673 210 aa2.13□□□□□ -2.07
SGD1YLR336C RED1P14291 827 aa2.12□□□□□ -2.07
SGD1YLR336C PHD1P36093 366 aa2.12□□□□□ -2.07
SGD1YLR336C SPC34P36131 295 aa2.12□□□□□ -2.07
SGD1YLR336C CST26P38226 397 aa2.12□□□□□ -2.07
SGD1YLR336C LAG1P38703 411 aa2.12□□□□□ -2.07
SGD1YLR336C KEL1P38853 1164 aaKnown RBP2.12□□□□□ -2.07
SGD1YLR336C IAH1P41734 238 aa2.12□□□□□ -2.07
SGD1YLR336C TOF2Q02208 771 aa2.12□□□□□ -2.07
SGD1YLR336C SYF1Q04048 859 aaPredicted RBP2.12□□□□□ -2.07
SGD1YLR336C YLR287CQ05881 355 aa2.12□□□□□ -2.07
SGD1YLR336C SSK1Q07084 712 aa2.12□□□□□ -2.07
SGD1YLR336C RTN2Q12443 393 aa2.12□□□□□ -2.07
SGD1YLR336C HNM1P19807 563 aa2.12□□□□□ -2.07
SGD1YLR336C SNC1P31109 117 aa2.12□□□□□ -2.07
SGD1YLR336C YME1P32795 747 aa2.12□□□□□ -2.07
SGD1YLR336C JNM1P36224 373 aa2.12□□□□□ -2.07
SGD1YLR336C MUM2P38236 366 aa2.12□□□□□ -2.07
SGD1YLR336C VID24P38263 362 aa2.12□□□□□ -2.07
SGD1YLR336C YHR210CP38893 341 aa2.12□□□□□ -2.07
SGD1YLR336C SMF1P38925 575 aa2.12□□□□□ -2.07
SGD1YLR336C MET30P39014 640 aa2.12□□□□□ -2.07
SGD1YLR336C YIL169CP40442 995 aa2.12□□□□□ -2.07
SGD1YLR336C SHR3Q02774 210 aa2.12□□□□□ -2.07
SGD1YLR336C YMR160WQ03823 816 aa2.12□□□□□ -2.07
SGD1YLR336C YMR087WQ04299 284 aa2.12□□□□□ -2.07
SGD1YLR336C CDC45Q08032 650 aa2.12□□□□□ -2.07
SGD1YLR336C YOR365CQ08844 703 aa2.12□□□□□ -2.07
SGD1YLR336C RIM20Q12033 661 aa2.12□□□□□ -2.07
SGD1YLR336C PDH1Q12428 516 aaKnown RBP2.12□□□□□ -2.07
SGD1YLR336C PEP5P12868 1029 aa2.11□□□□□ -2.07
SGD1YLR336C TCM62P38228 572 aaKnown RBP2.11□□□□□ -2.07
SGD1YLR336C YND1P40009 630 aa2.11□□□□□ -2.07
SGD1YLR336C AXL1P40851 1208 aa2.11□□□□□ -2.07
SGD1YLR336C STB2P46679 850 aa2.11□□□□□ -2.07
SGD1YLR336C GUF1P46943 645 aa2.11□□□□□ -2.07
SGD1YLR336C TWF1P53250 332 aa2.11□□□□□ -2.07
SGD1YLR336C RHO4Q00246 291 aa2.11□□□□□ -2.07
SGD1YLR336C RSF1Q05043 376 aa2.11□□□□□ -2.07
SGD1YLR336C FMP45Q07651 309 aa2.11□□□□□ -2.07
SGD1YLR336C YAP7Q08182 245 aa2.11□□□□□ -2.07
SGD1YLR336C ATG29Q12092 213 aa2.11□□□□□ -2.07
SGD1YLR336C RRG1Q12167 365 aaPredicted RBP2.11□□□□□ -2.07
SGD1YLR336C BAR1P12630 587 aa2.11□□□□□ -2.07
SGD1YLR336C CMC1P36064 111 aa2.11□□□□□ -2.07
SGD1YLR336C YKL023WP36103 277 aaKnown RBP2.11□□□□□ -2.07
SGD1YLR336C TIF4631P39935 952 aaKnown RBP2.11□□□□□ -2.07
SGD1YLR336C AZF1P41696 914 aa2.11□□□□□ -2.07
SGD1YLR336C CAF130P53280 1122 aaPredicted RBP2.11□□□□□ -2.07
SGD1YLR336C YMR155WQ03795 547 aa2.11□□□□□ -2.07
SGD1YLR336C TAP42Q04372 366 aa2.11□□□□□ -2.07
SGD1YLR336C THP1Q08231 455 aa2.11□□□□□ -2.07
SGD1YLR336C SCM3Q12334 223 aa2.11□□□□□ -2.07
SGD1YLR336C YDL007C-AQ2V2Q0 85 aa2.11□□□□□ -2.07
SGD1YLR336C COR1P07256 457 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms