RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C RRP3P38712 501 aaKnown RBP3.87□□□□□ -1.79
SMD3YLR147C CCT6P39079 546 aa3.87□□□□□ -1.79
SMD3YLR147C VID27P40157 782 aa3.87□□□□□ -1.79
SMD3YLR147C IKS1P47042 667 aa3.87□□□□□ -1.79
SMD3YLR147C BUD32P53323 261 aa3.87□□□□□ -1.79
SMD3YLR147C GIS2P53849 153 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SMD3YLR147C SVL3Q03088 825 aaKnown RBP3.87□□□□□ -1.79
SMD3YLR147C NGL3Q03210 505 aa3.87□□□□□ -1.79
SMD3YLR147C BUD22Q04347 519 aaKnown RBP3.87□□□□□ -1.79
SMD3YLR147C PEP5P12868 1029 aa3.86□□□□□ -1.79
SMD3YLR147C SEC62P21825 274 aa3.86□□□□□ -1.79
SMD3YLR147C PRO3P32263 286 aaKnown RBP3.86□□□□□ -1.79
SMD3YLR147C SIP2P34164 415 aaKnown RBP3.86□□□□□ -1.79
SMD3YLR147C TIF3P34167 436 aaKnown RBP3.86□□□□□ -1.79
SMD3YLR147C YBL029WP38201 376 aa3.86□□□□□ -1.79
SMD3YLR147C SNG1P46950 547 aa3.86□□□□□ -1.79
SMD3YLR147C DSD1P53095 428 aa3.86□□□□□ -1.79
SMD3YLR147C DUG3P53871 357 aa3.86□□□□□ -1.79
SMD3YLR147C RPC11Q04307 110 aaPredicted RBP3.86□□□□□ -1.79
SMD3YLR147C SCW10Q04951 389 aa3.86□□□□□ -1.79
SMD3YLR147C MRP13P12686 339 aa3.85□□□□□ -1.79
SMD3YLR147C CSM2P40465 213 aa3.85□□□□□ -1.79
SMD3YLR147C IMP4P53941 290 aaKnown RBP3.85□□□□□ -1.79
SMD3YLR147C SHR3Q02774 210 aa3.85□□□□□ -1.79
SMD3YLR147C GLO2Q05584 274 aa3.85□□□□□ -1.79
SMD3YLR147C CDC45Q08032 650 aa3.85□□□□□ -1.79
SMD3YLR147C YOR365CQ08844 703 aa3.85□□□□□ -1.79
SMD3YLR147C YDR056CQ12025 205 aa3.85□□□□□ -1.79
SMD3YLR147C NMD4Q12129 218 aa3.85□□□□□ -1.79
SMD3YLR147C NOP58Q12499 511 aaKnown RBP3.85□□□□□ -1.79
SMD3YLR147C APE1P14904 514 aa3.84□□□□□ -1.79
SMD3YLR147C AMD1P15274 810 aaKnown RBP3.84□□□□□ -1.79
SMD3YLR147C PAH1P32567 862 aa3.84□□□□□ -1.79
SMD3YLR147C UBP11P36026 717 aa3.84□□□□□ -1.79
SMD3YLR147C YKL023WP36103 277 aaKnown RBP3.84□□□□□ -1.79
SMD3YLR147C MDM31P38880 579 aa3.84□□□□□ -1.79
SMD3YLR147C VPS52P39904 641 aa3.84□□□□□ -1.79
SMD3YLR147C RPR2P40571 144 aa3.84□□□□□ -1.79
SMD3YLR147C RTT101P47050 842 aa3.84□□□□□ -1.79
SMD3YLR147C YGL082WP53155 381 aa3.84□□□□□ -1.79
SMD3YLR147C YGR126WP53274 230 aa3.84□□□□□ -1.79
SMD3YLR147C SDH5Q08230 162 aa3.84□□□□□ -1.79
SMD3YLR147C FMP40Q08968 688 aaPredicted RBP3.84□□□□□ -1.79
SMD3YLR147C PPT2Q12036 173 aa3.84□□□□□ -1.79
SMD3YLR147C HUA2Q12134 243 aa3.84□□□□□ -1.79
SMD3YLR147C PEP4P07267 405 aaKnown RBP3.83□□□□□ -1.8
SMD3YLR147C ELO2P25358 347 aa3.83□□□□□ -1.8
SMD3YLR147C SGF29P25554 259 aa3.83□□□□□ -1.8
SMD3YLR147C NDC1P32500 655 aa3.83□□□□□ -1.8
SMD3YLR147C OSH3P38713 996 aaKnown RBP3.83□□□□□ -1.8
SMD3YLR147C YHR210CP38893 341 aa3.83□□□□□ -1.8
SMD3YLR147C CIN4P39110 191 aa3.83□□□□□ -1.8
SMD3YLR147C FLC2P39719 783 aa3.83□□□□□ -1.8
SMD3YLR147C NOP16P40007 231 aaKnown RBP3.83□□□□□ -1.8
SMD3YLR147C UPF3P48412 387 aaKnown RBP3.83□□□□□ -1.8
SMD3YLR147C YDL186WP48568 277 aa3.83□□□□□ -1.8
SMD3YLR147C ALT2P52892 507 aa3.83□□□□□ -1.8
SMD3YLR147C COS10P52924 374 aa3.83□□□□□ -1.8
SMD3YLR147C ERP1Q05359 219 aaKnown RBP3.83□□□□□ -1.8
SMD3YLR147C BNA5Q05979 453 aa3.83□□□□□ -1.8
SMD3YLR147C SYO1Q07395 620 aa3.83□□□□□ -1.8
SMD3YLR147C YEH1Q07804 573 aa3.83□□□□□ -1.8
SMD3YLR147C YPT6Q99260 215 aa3.83□□□□□ -1.8
SMD3YLR147C SGS1P35187 1447 aa3.82□□□□□ -1.8
SMD3YLR147C SEM1O94742 89 aa3.82□□□□□ -1.8
SMD3YLR147C SUC2P00724 532 aa3.82□□□□□ -1.8
SMD3YLR147C ART10P18634 518 aaKnown RBP3.82□□□□□ -1.8
SMD3YLR147C SPC110P32380 944 aa3.82□□□□□ -1.8
SMD3YLR147C SAC6P32599 642 aaKnown RBP3.82□□□□□ -1.8
SMD3YLR147C RPH1P39956 796 aa3.82□□□□□ -1.8
SMD3YLR147C YFR016CP43597 1233 aaKnown RBP3.82□□□□□ -1.8
SMD3YLR147C YJR154WP47181 346 aa3.82□□□□□ -1.8
SMD3YLR147C YDL057WQ07379 328 aa3.82□□□□□ -1.8
SMD3YLR147C RAD52P06778 471 aaKnown RBP3.81□□□□□ -1.8
SMD3YLR147C GDH1P07262 454 aaKnown RBP3.81□□□□□ -1.8
SMD3YLR147C AAC3P18238 307 aa3.81□□□□□ -1.8
SMD3YLR147C SAN1P22470 610 aa3.81□□□□□ -1.8
SMD3YLR147C BUD14P27637 709 aa3.81□□□□□ -1.8
SMD3YLR147C YNK1P36010 153 aaKnown RBP3.81□□□□□ -1.8
SMD3YLR147C YHR218WP38899 603 aa3.81□□□□□ -1.8
SMD3YLR147C AFG3P39925 761 aa3.81□□□□□ -1.8
SMD3YLR147C RLI1Q03195 608 aaKnown RBP3.81□□□□□ -1.8
SMD3YLR147C SLD5Q03406 294 aa3.81□□□□□ -1.8
SMD3YLR147C COQ9Q05779 260 aa3.81□□□□□ -1.8
SMD3YLR147C AYT1Q12226 474 aa3.81□□□□□ -1.8
SMD3YLR147C SET6Q12529 373 aa3.81□□□□□ -1.8
SMD3YLR147C MTF1P14908 341 aaKnown RBP3.8□□□□□ -1.8
SMD3YLR147C EST1P17214 699 aaPredicted RBP3.8□□□□□ -1.8
SMD3YLR147C MCK1P21965 375 aaKnown RBP3.8□□□□□ -1.8
SMD3YLR147C YCR022CP25620 114 aa3.8□□□□□ -1.8
SMD3YLR147C AGA1P32323 725 aa3.8□□□□□ -1.8
SMD3YLR147C PTR2P32901 601 aa3.8□□□□□ -1.8
SMD3YLR147C MTC4P38335 694 aaKnown RBP3.8□□□□□ -1.8
SMD3YLR147C SGN1P40561 250 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SMD3YLR147C YJL213WP40896 331 aa3.8□□□□□ -1.8
SMD3YLR147C SCD6P45978 349 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SMD3YLR147C IPI3P53877 555 aa3.8□□□□□ -1.8
SMD3YLR147C YDL009CQ12210 107 aa3.8□□□□□ -1.8
SMD3YLR147C HSH49Q99181 213 aaPredicted RBP3.8□□□□□ -1.8
SMD3YLR147C SEC53P07283 254 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms