RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W YER190C-BP0CX94 160 aa1.44□□□□□ -2.18
SLX4YLR135W YEL077W-AP0CX95 160 aa1.44□□□□□ -2.18
SLX4YLR135W YGR296C-BP0CX96 160 aa1.44□□□□□ -2.18
SLX4YLR135W YPL283W-BP0CX97 160 aa1.44□□□□□ -2.18
SLX4YLR135W YPR204C-AP0CX98 160 aa1.44□□□□□ -2.18
SLX4YLR135W YAP1P19880 650 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W PRP2P20095 876 aaPredicted RBP1.44□□□□□ -2.18
SLX4YLR135W ELO2P25358 347 aa1.44□□□□□ -2.18
SLX4YLR135W ADK2P26364 225 aa1.44□□□□□ -2.18
SLX4YLR135W PAP1P29468 568 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W ECM32P32644 1121 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W YME1P32795 747 aa1.44□□□□□ -2.18
SLX4YLR135W PXA2P34230 853 aa1.44□□□□□ -2.18
SLX4YLR135W PEX5P35056 612 aa1.44□□□□□ -2.18
SLX4YLR135W YKL023WP36103 277 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W SRP72P38688 640 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W ANS1P38832 159 aa1.44□□□□□ -2.18
SLX4YLR135W PCL6P40038 420 aa1.44□□□□□ -2.18
SLX4YLR135W YIL024CP40543 189 aa1.44□□□□□ -2.18
SLX4YLR135W VMA13P41807 478 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W GAT1P43574 510 aa1.44□□□□□ -2.18
SLX4YLR135W DLD2P46681 530 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W AIM22P47051 409 aa1.44□□□□□ -2.18
SLX4YLR135W VPS25P47142 202 aa1.44□□□□□ -2.18
SLX4YLR135W YPT11P48559 417 aa1.44□□□□□ -2.18
SLX4YLR135W SGF73P53165 657 aa1.44□□□□□ -2.18
SLX4YLR135W PKP2P53170 491 aa1.44□□□□□ -2.18
SLX4YLR135W RSC1P53236 928 aa1.44□□□□□ -2.18
SLX4YLR135W YGR126WP53274 230 aa1.44□□□□□ -2.18
SLX4YLR135W RPL15BP54780 204 aaPredicted RBP1.44□□□□□ -2.18
SLX4YLR135W VPS9P54787 451 aa1.44□□□□□ -2.18
SLX4YLR135W RHO4Q00246 291 aa1.44□□□□□ -2.18
SLX4YLR135W RSM23Q01163 450 aa1.44□□□□□ -2.18
SLX4YLR135W TOF2Q02208 771 aa1.44□□□□□ -2.18
SLX4YLR135W YVH1Q02256 364 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W RMT2Q03305 412 aa1.44□□□□□ -2.18
SLX4YLR135W YMR160WQ03823 816 aa1.44□□□□□ -2.18
SLX4YLR135W PDS5Q04264 1277 aa1.44□□□□□ -2.18
SLX4YLR135W ECI1Q05871 280 aa1.44□□□□□ -2.18
SLX4YLR135W YLR345WQ06137 509 aa1.44□□□□□ -2.18
SLX4YLR135W ECM30Q06673 1274 aa1.44□□□□□ -2.18
SLX4YLR135W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
SLX4YLR135W BRR1Q99177 341 aaPredicted RBP1.44□□□□□ -2.18
SLX4YLR135W YRF1-4O13559 1382 aa1.44□□□□□ -2.18
SLX4YLR135W EDE1P34216 1381 aa1.44□□□□□ -2.18
SLX4YLR135W PEP4P07267 405 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W RPL31BP0C2H9 113 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W RPB8P20436 146 aa1.44□□□□□ -2.18
SLX4YLR135W REC107P21651 314 aa1.44□□□□□ -2.18
SLX4YLR135W AIM17P23180 465 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W YCP4P25349 247 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W SNC1P31109 117 aa1.44□□□□□ -2.18
SLX4YLR135W DBF4P32325 704 aa1.44□□□□□ -2.18
SLX4YLR135W PMT1P33775 817 aa1.44□□□□□ -2.18
SLX4YLR135W SAS3P34218 831 aa1.44□□□□□ -2.18
SLX4YLR135W SPC34P36131 295 aa1.44□□□□□ -2.18
SLX4YLR135W STV1P37296 890 aa1.44□□□□□ -2.18
SLX4YLR135W LAG1P38703 411 aa1.44□□□□□ -2.18
SLX4YLR135W LRP1P38801 184 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W YIL060WP40519 144 aa1.44□□□□□ -2.18
SLX4YLR135W IAH1P41734 238 aa1.44□□□□□ -2.18
SLX4YLR135W DRN1P53255 507 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W SOL4P53315 255 aa1.44□□□□□ -2.18
SLX4YLR135W YNL181WP53878 407 aa1.44□□□□□ -2.18
SLX4YLR135W YDR239CQ03780 787 aa1.44□□□□□ -2.18
SLX4YLR135W ERB1Q04660 807 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W SOV1Q04748 898 aa1.44□□□□□ -2.18
SLX4YLR135W RBS1Q05672 457 aaKnown RBP1.44□□□□□ -2.18
SLX4YLR135W POS5Q06892 414 aa1.44□□□□□ -2.18
SLX4YLR135W ATX2Q12067 313 aa1.44□□□□□ -2.18
SLX4YLR135W SNU66Q12420 587 aaPredicted RBP1.44□□□□□ -2.18
SLX4YLR135W ARP6Q12509 438 aa1.44□□□□□ -2.18
SLX4YLR135W RAV1P47104 1357 aa1.43□□□□□ -2.18
SLX4YLR135W HOM3P10869 527 aa1.43□□□□□ -2.18
SLX4YLR135W SNF3P10870 884 aa1.43□□□□□ -2.18
SLX4YLR135W PEP5P12868 1029 aa1.43□□□□□ -2.18
SLX4YLR135W CLB1P24868 471 aa1.43□□□□□ -2.18
SLX4YLR135W GID7P25569 745 aa1.43□□□□□ -2.18
SLX4YLR135W YCR051WP25631 222 aa1.43□□□□□ -2.18
SLX4YLR135W IDH2P28241 369 aaKnown RBP1.43□□□□□ -2.18
SLX4YLR135W HXT3P32466 567 aaKnown RBP1.43□□□□□ -2.18
SLX4YLR135W SHP1P34223 423 aa1.43□□□□□ -2.18
SLX4YLR135W YPK3P38070 525 aa1.43□□□□□ -2.18
SLX4YLR135W EFM2P38347 419 aa1.43□□□□□ -2.18
SLX4YLR135W SPC97P38863 823 aa1.43□□□□□ -2.18
SLX4YLR135W YMR124WP39523 943 aaKnown RBP1.43□□□□□ -2.18
SLX4YLR135W SSU1P41930 458 aa1.43□□□□□ -2.18
SLX4YLR135W SNG1P46950 547 aa1.43□□□□□ -2.18
SLX4YLR135W ATG27P46989 271 aa1.43□□□□□ -2.18
SLX4YLR135W URB2P47108 1174 aa1.43□□□□□ -2.18
SLX4YLR135W ALT2P52892 507 aa1.43□□□□□ -2.18
SLX4YLR135W HEF3P53978 1044 aaKnown RBP1.43□□□□□ -2.18
SLX4YLR135W CIK1Q01649 594 aa1.43□□□□□ -2.18
SLX4YLR135W NUP100Q02629 959 aa1.43□□□□□ -2.18
SLX4YLR135W KAP120Q02932 1032 aa1.43□□□□□ -2.18
SLX4YLR135W ARX1Q03862 593 aaKnown RBP1.43□□□□□ -2.18
SLX4YLR135W SXM1Q04175 944 aaKnown RBP1.43□□□□□ -2.18
SLX4YLR135W MRPL1Q04599 285 aa1.43□□□□□ -2.18
SLX4YLR135W RSF1Q05043 376 aa1.43□□□□□ -2.18
SLX4YLR135W YLR352WQ06479 807 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms