RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C LNP1P38878 278 aa2.3□□□□□ -2.04
CSF1YLR087C ILV3P39522 585 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C UIP3P39547 235 aa2.3□□□□□ -2.04
CSF1YLR087C AIM10P39965 576 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C GTT1P40582 234 aa2.3□□□□□ -2.04
CSF1YLR087C YFR018CP43599 363 aa2.3□□□□□ -2.04
CSF1YLR087C MRX6P48564 524 aa2.3□□□□□ -2.04
CSF1YLR087C ARG5,6Q01217 863 aa2.3□□□□□ -2.04
CSF1YLR087C DML1Q03652 475 aa2.3□□□□□ -2.04
CSF1YLR087C IWR1Q07532 353 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
CSF1YLR087C YAP7Q08182 245 aa2.3□□□□□ -2.04
CSF1YLR087C ADR1P07248 1323 aa2.3□□□□□ -2.04
CSF1YLR087C SEC16P48415 2195 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C SAM1P10659 382 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C RPL4AP10664 362 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C PRI2P20457 528 aa2.3□□□□□ -2.04
CSF1YLR087C RRP7P25368 297 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C KIP1P28742 1111 aa2.3□□□□□ -2.04
CSF1YLR087C BIT2P38346 545 aa2.3□□□□□ -2.04
CSF1YLR087C MNT3P40549 630 aa2.3□□□□□ -2.04
CSF1YLR087C HUL4P40985 892 aa2.3□□□□□ -2.04
CSF1YLR087C SNG1P46950 547 aa2.3□□□□□ -2.04
CSF1YLR087C CSN12P47130 423 aa2.3□□□□□ -2.04
CSF1YLR087C RPL4BP49626 362 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C BUD32P53323 261 aa2.3□□□□□ -2.04
CSF1YLR087C RHO3Q00245 231 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C RKM2Q03942 479 aa2.3□□□□□ -2.04
CSF1YLR087C YMR034CQ05131 434 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C FLC1Q08967 793 aa2.3□□□□□ -2.04
CSF1YLR087C YPL260WQ08977 551 aa2.3□□□□□ -2.04
CSF1YLR087C FAP7Q12055 197 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C AHC1Q12433 566 aa2.3□□□□□ -2.04
CSF1YLR087C DDP1Q99321 188 aaKnown RBP2.3□□□□□ -2.04
CSF1YLR087C TY4B-JP47024 1803 aa2.3□□□□□ -2.04
CSF1YLR087C MYO1P08964 1928 aa2.3□□□□□ -2.04
CSF1YLR087C IDH1P28834 360 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
CSF1YLR087C EUG1P32474 517 aa2.3□□□□□ -2.04
CSF1YLR087C RAD24P32641 659 aa2.3□□□□□ -2.04
CSF1YLR087C RCK1P38622 512 aa2.3□□□□□ -2.04
CSF1YLR087C SSF1P38789 453 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C ARO9P38840 513 aaPredicted RBP2.3□□□□□ -2.04
CSF1YLR087C SIP4P46954 829 aa2.3□□□□□ -2.04
CSF1YLR087C IBA57P47158 497 aa2.3□□□□□ -2.04
CSF1YLR087C MCM22P47167 239 aa2.3□□□□□ -2.04
CSF1YLR087C YNR065CP53751 1116 aa2.3□□□□□ -2.04
CSF1YLR087C MSB4Q12317 492 aa2.3□□□□□ -2.04
CSF1YLR087C GIS3Q12418 502 aa2.3□□□□□ -2.04
CSF1YLR087C YLR415CO13578 112 aa2.29□□□□□ -2.04
CSF1YLR087C CBF1P17106 351 aa2.29□□□□□ -2.04
CSF1YLR087C COQ1P18900 473 aa2.29□□□□□ -2.04
CSF1YLR087C VPS33P20795 691 aa2.29□□□□□ -2.04
CSF1YLR087C DUN1P39009 513 aa2.29□□□□□ -2.04
CSF1YLR087C RFC4P40339 323 aaKnown RBP2.29□□□□□ -2.04
CSF1YLR087C IMA5P40884 581 aa2.29□□□□□ -2.04
CSF1YLR087C ATG4P53867 494 aa2.29□□□□□ -2.04
CSF1YLR087C TGL2P54857 326 aa2.29□□□□□ -2.04
CSF1YLR087C VHS1Q03785 461 aa2.29□□□□□ -2.04
CSF1YLR087C SAS4Q04003 481 aa2.29□□□□□ -2.04
CSF1YLR087C MPC54Q08550 464 aa2.29□□□□□ -2.04
CSF1YLR087C RNP1P32385 249 aa2.29□□□□□ -2.04
CSF1YLR087C NHP2P32495 156 aaPredicted RBP2.29□□□□□ -2.04
CSF1YLR087C YBR241CP38142 488 aa2.29□□□□□ -2.04
CSF1YLR087C YHR131CP38835 850 aa2.29□□□□□ -2.04
CSF1YLR087C MNN9P39107 395 aaKnown RBP2.29□□□□□ -2.04
CSF1YLR087C AZR1P50080 613 aa2.29□□□□□ -2.04
CSF1YLR087C YGL036WP53185 909 aaPredicted RBP2.29□□□□□ -2.04
CSF1YLR087C ADE16P54113 591 aaKnown RBP2.29□□□□□ -2.04
CSF1YLR087C SAE3P89114 91 aa2.29□□□□□ -2.04
CSF1YLR087C SDH1Q00711 640 aa2.29□□□□□ -2.04
CSF1YLR087C ATP7P30902 174 aa2.29□□□□□ -2.04
CSF1YLR087C SRP101P32916 621 aa2.29□□□□□ -2.04
CSF1YLR087C CSM2P40465 213 aa2.29□□□□□ -2.04
CSF1YLR087C INP51P40559 946 aaKnown RBP2.29□□□□□ -2.04
CSF1YLR087C CRZ1P53968 678 aa2.29□□□□□ -2.04
CSF1YLR087C TVP15Q03860 143 aa2.29□□□□□ -2.04
CSF1YLR087C SCW10Q04951 389 aa2.29□□□□□ -2.04
CSF1YLR087C GIC2Q06648 383 aa2.29□□□□□ -2.04
CSF1YLR087C AIM41Q12032 185 aa2.29□□□□□ -2.04
CSF1YLR087C SMF3Q12078 473 aaPredicted RBP2.29□□□□□ -2.04
CSF1YLR087C YLL058WQ12198 575 aa2.29□□□□□ -2.04
CSF1YLR087C CHS1P08004 1131 aa2.29□□□□□ -2.04
CSF1YLR087C MRP13P12686 339 aa2.29□□□□□ -2.04
CSF1YLR087C AFG1P32317 509 aa2.29□□□□□ -2.04
CSF1YLR087C SKG6P32900 734 aaPredicted RBP2.29□□□□□ -2.04
CSF1YLR087C DOA1P36037 715 aa2.29□□□□□ -2.04
CSF1YLR087C ADE17P38009 592 aaKnown RBP2.29□□□□□ -2.04
CSF1YLR087C MCM7P38132 845 aa2.29□□□□□ -2.04
CSF1YLR087C YPC1P38298 316 aa2.29□□□□□ -2.04
CSF1YLR087C MEF2P39677 819 aa2.29□□□□□ -2.04
CSF1YLR087C GCD10P41814 478 aa2.29□□□□□ -2.04
CSF1YLR087C DLD2P46681 530 aaKnown RBP2.29□□□□□ -2.04
CSF1YLR087C ALY2P47029 1046 aa2.29□□□□□ -2.04
CSF1YLR087C MSS11Q03825 758 aa2.29□□□□□ -2.04
CSF1YLR087C HCR1Q05775 265 aaKnown RBP2.29□□□□□ -2.04
CSF1YLR087C PRP11Q07350 266 aaPredicted RBP2.29□□□□□ -2.04
CSF1YLR087C HAT1Q12341 374 aa2.29□□□□□ -2.04
CSF1YLR087C CNA1P23287 553 aa2.29□□□□□ -2.04
CSF1YLR087C INO2P26798 304 aa2.29□□□□□ -2.04
CSF1YLR087C APL2P36000 726 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms