RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C FSH1P38777 243 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C IDP3P53982 420 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C YSA1Q01976 231 aa2.34□□□□□ -2.03
VPS13YLL040C NTG2Q08214 380 aa2.34□□□□□ -2.03
VPS13YLL040C SGO1Q08490 590 aa2.34□□□□□ -2.03
VPS13YLL040C SMF3Q12078 473 aaPredicted RBP2.34□□□□□ -2.03
VPS13YLL040C ZPS1Q12512 249 aa2.34□□□□□ -2.03
VPS13YLL040C TY4B-PA0A0B7P3V8 1104 aa2.34□□□□□ -2.03
VPS13YLL040C CAM1P29547 415 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C MLS1P30952 554 aa2.34□□□□□ -2.03
VPS13YLL040C MSS51P32335 436 aa2.34□□□□□ -2.03
VPS13YLL040C BSD2P38356 321 aa2.34□□□□□ -2.03
VPS13YLL040C PHO89P38361 574 aa2.34□□□□□ -2.03
VPS13YLL040C YEL068CP39977 110 aa2.34□□□□□ -2.03
VPS13YLL040C ULI1P43604 169 aa2.34□□□□□ -2.03
VPS13YLL040C IMD4P50094 524 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C YGR283CP53336 341 aaPredicted RBP2.34□□□□□ -2.03
VPS13YLL040C GOR1P53839 350 aa2.34□□□□□ -2.03
VPS13YLL040C YMR209CQ03648 457 aa2.34□□□□□ -2.03
VPS13YLL040C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
VPS13YLL040C UIP4Q08926 304 aa2.34□□□□□ -2.03
VPS13YLL040C JLP1Q12358 412 aa2.34□□□□□ -2.03
VPS13YLL040C ATP4P05626 244 aa2.34□□□□□ -2.04
VPS13YLL040C COX9P07255 59 aa2.34□□□□□ -2.04
VPS13YLL040C YBR138CP38277 524 aa2.34□□□□□ -2.04
VPS13YLL040C TRM5P38793 499 aa2.34□□□□□ -2.04
VPS13YLL040C RGT2Q12300 763 aa2.34□□□□□ -2.04
VPS13YLL040C ABF1P14164 731 aa2.34□□□□□ -2.04
VPS13YLL040C GUK1P15454 187 aaKnown RBP2.34□□□□□ -2.04
VPS13YLL040C SLX5P32828 619 aaKnown RBP2.34□□□□□ -2.04
VPS13YLL040C SLX1P38324 304 aa2.34□□□□□ -2.04
VPS13YLL040C SKI8Q02793 397 aaPredicted RBP2.34□□□□□ -2.04
VPS13YLL040C PML39Q03760 334 aa2.34□□□□□ -2.04
VPS13YLL040C YSH1Q06224 779 aaPredicted RBP2.34□□□□□ -2.04
VPS13YLL040C AAD4Q07747 329 aa2.34□□□□□ -2.04
VPS13YLL040C YKL018C-AQ3E7A7 99 aa2.34□□□□□ -2.04
VPS13YLL040C MHF2Q3E829 80 aa2.34□□□□□ -2.04
VPS13YLL040C MAK5P38112 773 aaPredicted RBP2.34□□□□□ -2.04
VPS13YLL040C GEM1P39722 662 aa2.34□□□□□ -2.04
VPS13YLL040C CBS2P14905 389 aa2.33□□□□□ -2.04
VPS13YLL040C MSS116P15424 664 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C DIT1P21623 536 aa2.33□□□□□ -2.04
VPS13YLL040C RPC19P28000 142 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C YBL086CP38177 466 aa2.33□□□□□ -2.04
VPS13YLL040C COS111P38308 924 aa2.33□□□□□ -2.04
VPS13YLL040C ECM10P39987 644 aa2.33□□□□□ -2.04
VPS13YLL040C JLP2P40206 208 aa2.33□□□□□ -2.04
VPS13YLL040C YAE1P47118 141 aaPredicted RBP2.33□□□□□ -2.04
VPS13YLL040C TDA1Q03533 586 aa2.33□□□□□ -2.04
VPS13YLL040C EFR3Q03653 782 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C SKY1Q03656 742 aa2.33□□□□□ -2.04
VPS13YLL040C RAD33Q04231 177 aa2.33□□□□□ -2.04
VPS13YLL040C YDR278CQ05612 105 aa2.33□□□□□ -2.04
VPS13YLL040C PHO92Q06390 306 aa2.33□□□□□ -2.04
VPS13YLL040C PSY3Q12318 242 aa2.33□□□□□ -2.04
VPS13YLL040C RPL6BP05739 176 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C GID7P25569 745 aa2.33□□□□□ -2.04
VPS13YLL040C AAD3P25612 363 aa2.33□□□□□ -2.04
VPS13YLL040C SHP1P34223 423 aa2.33□□□□□ -2.04
VPS13YLL040C TSA1P34760 196 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C ORC6P38826 435 aa2.33□□□□□ -2.04
VPS13YLL040C RBG1P39729 369 aa2.33□□□□□ -2.04
VPS13YLL040C FAR7P43592 221 aa2.33□□□□□ -2.04
VPS13YLL040C SUE1Q06524 206 aa2.33□□□□□ -2.04
VPS13YLL040C YOR385WQ08909 290 aa2.33□□□□□ -2.04
VPS13YLL040C WTM1Q12363 437 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C RTP1Q12751 981 aa2.33□□□□□ -2.04
VPS13YLL040C MF(ALPHA)1P01149 165 aa2.33□□□□□ -2.04
VPS13YLL040C PUT2P07275 575 aa2.33□□□□□ -2.04
VPS13YLL040C KIN2P13186 1147 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C PMA2P19657 947 aa2.33□□□□□ -2.04
VPS13YLL040C SIS1P25294 352 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C MGT1P26188 188 aa2.33□□□□□ -2.04
VPS13YLL040C UTR4P32626 227 aa2.33□□□□□ -2.04
VPS13YLL040C SLM4P38247 162 aa2.33□□□□□ -2.04
VPS13YLL040C ATG7P38862 630 aa2.33□□□□□ -2.04
VPS13YLL040C MUK1Q02866 612 aa2.33□□□□□ -2.04
VPS13YLL040C YDR476CQ03362 224 aa2.33□□□□□ -2.04
VPS13YLL040C RSN1Q03516 953 aa2.33□□□□□ -2.04
VPS13YLL040C TRM82Q03774 444 aa2.33□□□□□ -2.04
VPS13YLL040C RGC1Q06108 1083 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C YPR084WQ06821 456 aa2.33□□□□□ -2.04
VPS13YLL040C VAM6Q07468 1049 aa2.33□□□□□ -2.04
VPS13YLL040C NUS1Q12063 375 aa2.33□□□□□ -2.04
VPS13YLL040C AIM7Q12156 149 aa2.33□□□□□ -2.04
VPS13YLL040C YPR1Q12458 312 aa2.33□□□□□ -2.04
VPS13YLL040C PFK27Q12471 397 aaPredicted RBP2.33□□□□□ -2.04
VPS13YLL040C COR1P07256 457 aa2.33□□□□□ -2.04
VPS13YLL040C SWI5P08153 709 aa2.33□□□□□ -2.04
VPS13YLL040C HAP4P14064 554 aa2.33□□□□□ -2.04
VPS13YLL040C YCR016WP25617 290 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C BUB2P26448 306 aaPredicted RBP2.33□□□□□ -2.04
VPS13YLL040C YJU2P28320 278 aaPredicted RBP2.33□□□□□ -2.04
VPS13YLL040C APM3P38153 483 aa2.33□□□□□ -2.04
VPS13YLL040C BRL1P38770 471 aa2.33□□□□□ -2.04
VPS13YLL040C GDH3P39708 457 aa2.33□□□□□ -2.04
VPS13YLL040C YIL067CP40514 678 aa2.33□□□□□ -2.04
VPS13YLL040C CHA4P43634 648 aa2.33□□□□□ -2.04
VPS13YLL040C VPS25P47142 202 aa2.33□□□□□ -2.04
VPS13YLL040C YJR107WP47145 328 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms