RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	KAR4	P25583	335 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	MSH1	P25846	959 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	NDI1	P32340	513 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	HEM12	P32347	362 aa	Predicted RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	MCM10	P32354	571 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	CDC12	P32468	407 aa	Known RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	SRP101	P32916	621 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	SPT23	P35210	1082 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	TGL4	P36165	910 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	CCT2	P39076	527 aa	Known RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	DPH1	P40487	425 aa	Known RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	IST3	P40565	148 aa	Predicted RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	COX16	P47081	118 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	HAM1	P47119	197 aa	Known RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	RPN14	P53196	417 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	GTR1	Q00582	310 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	CDC14	Q00684	551 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	RLI1	Q03195	608 aa	Known RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	STE23	Q06010	1027 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	YDR056C	Q12025	205 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	PEX11	Q12462	236 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	YEL077C	Q3E7X8	1277 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	MSB2	P32334	1306 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	ARG4	P04076	463 aa	Predicted RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	SIR3	P06701	978 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	PYC1	P11154	1178 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	SST2	P11972	698 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	FUR1	P18562	216 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
DOA1	YKL213C	DAL81	P21657	970 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	PUP1	P25043	261 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	GEX1	P25596	615 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	URA10	P30402	227 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	ORC2	P32833	620 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	GEX2	P36173	615 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	YRB2	P40517	327 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	DUG1	P43616	481 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	TAF4	P50105	388 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	VEL1	P53058	206 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	STR3	P53101	465 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	NMA2	P53204	395 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	YTP1	P53584	459 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	GOR1	P53839	350 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	TEP1	P53916	434 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	RMI1	Q02685	241 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	DPB4	Q04603	196 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	SPR28	Q04921	423 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	LDB18	Q07887	179 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	ATG29	Q12092	213 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	LDB17	Q12342	491 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	FRT1	Q99332	602 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	FMP27	Q06179	2628 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	LAT1	P12695	482 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	YCL068C	P25593	260 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	ILV6	P25605	309 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	ZIP1	P31111	875 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	GUT2	P32191	649 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	TYE7	P33122	291 aa	Predicted RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	YUH1	P35127	236 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	SEA4	P38164	1038 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	THO1	P40040	218 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	YFL012W	P43580	148 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	AIM23	P47015	356 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	YDL183C	P48569	320 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	AIM14	P53109	570 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	PIR1	Q03178	341 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	CMS1	Q07897	291 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	NOP12	Q08208	459 aa	Known RBP	4.85	□□□□□ -1.63
DOA1	YKL213C	YLR125W	Q12138	136 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	YOR019W	Q99248	730 aa		4.85	□□□□□ -1.63
DOA1	YKL213C	RPP2B	P02400	110 aa	Known RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	SCH9	P11792	824 aa	Known RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	MET8	P15807	274 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	PRP16	P15938	1071 aa	Predicted RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	CAF4	P36130	643 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	FZO1	P38297	855 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	SOH1	P38633	127 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	BUD13	P46947	266 aa	Predicted RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	MAD3	P47074	515 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	PYK2	P52489	506 aa	Known RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	FLC3	P53121	802 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	PEF1	P53238	335 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	ARC35	P53731	342 aa	Known RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	KTR5	P53966	522 aa	Predicted RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	REG1	Q00816	1014 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	USA1	Q03714	838 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	MCM21	Q06675	368 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	GRS2	Q06817	618 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	DTD1	Q07648	150 aa	Known RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	TRE2	Q08693	809 aa		4.84	□□□□□ -1.63
DOA1	YKL213C	YPL225W	Q08971	146 aa	Known RBP	4.84	□□□□□ -1.63
DOA1	YKL213C	TRP3	P00937	484 aa		4.84	□□□□□ -1.64
DOA1	YKL213C	PDE2	P06776	526 aa		4.84	□□□□□ -1.64
DOA1	YKL213C	ILV2	P07342	687 aa	Known RBP	4.84	□□□□□ -1.64
DOA1	YKL213C	GPA2	P10823	449 aa		4.84	□□□□□ -1.64
DOA1	YKL213C	DAP2	P18962	818 aa		4.84	□□□□□ -1.64
DOA1	YKL213C	FPR1	P20081	114 aa	Known RBP	4.84	□□□□□ -1.64
DOA1	YKL213C	RPC19	P28000	142 aa	Known RBP	4.84	□□□□□ -1.64
DOA1	YKL213C	LIP5	P32875	414 aa		4.84	□□□□□ -1.64
DOA1	YKL213C	GDH2	P33327	1092 aa	Known RBP	4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms