RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W YPL108WQ02872 168 aaPredicted RBP2.31□□□□□ -2.04
NUP100YKL068W CSI1Q04368 295 aa2.31□□□□□ -2.04
NUP100YKL068W PUS7Q08647 676 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W YOR223WQ12015 292 aa2.31□□□□□ -2.04
NUP100YKL068W COQ4O13525 335 aa2.31□□□□□ -2.04
NUP100YKL068W CBP2P03874 630 aaPredicted RBP2.31□□□□□ -2.04
NUP100YKL068W ARD1P07347 238 aaPredicted RBP2.31□□□□□ -2.04
NUP100YKL068W VPS33P20795 691 aa2.31□□□□□ -2.04
NUP100YKL068W PPH22P23595 377 aa2.31□□□□□ -2.04
NUP100YKL068W ADH7P25377 361 aa2.31□□□□□ -2.04
NUP100YKL068W BOS1P25385 244 aa2.31□□□□□ -2.04
NUP100YKL068W AFG1P32317 509 aa2.31□□□□□ -2.04
NUP100YKL068W MGM101P32787 269 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W YME2P32843 850 aa2.31□□□□□ -2.04
NUP100YKL068W PGM1P33401 570 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W MAE1P36013 669 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W CEM1P39525 442 aa2.31□□□□□ -2.04
NUP100YKL068W INA22P40576 216 aa2.31□□□□□ -2.04
NUP100YKL068W HXT14P42833 540 aa2.31□□□□□ -2.04
NUP100YKL068W PFA3P42836 336 aa2.31□□□□□ -2.04
NUP100YKL068W CTK2P46962 323 aa2.31□□□□□ -2.04
NUP100YKL068W HOP2P53187 214 aa2.31□□□□□ -2.04
NUP100YKL068W YDR444WQ04093 687 aa2.31□□□□□ -2.04
NUP100YKL068W VPS20Q04272 221 aa2.31□□□□□ -2.04
NUP100YKL068W RQC1Q05468 723 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W YLR297WQ05899 129 aa2.31□□□□□ -2.04
NUP100YKL068W CUR1Q06469 252 aa2.31□□□□□ -2.04
NUP100YKL068W YOL107WQ12239 342 aa2.31□□□□□ -2.04
NUP100YKL068W YOR097CQ12274 175 aaPredicted RBP2.31□□□□□ -2.04
NUP100YKL068W YIL002W-AQ3E7Z5 69 aa2.31□□□□□ -2.04
NUP100YKL068W ECM3Q99252 613 aa2.31□□□□□ -2.04
NUP100YKL068W SAC7P17121 654 aa2.3□□□□□ -2.04
NUP100YKL068W BUD14P27637 709 aa2.3□□□□□ -2.04
NUP100YKL068W YJU2P28320 278 aaPredicted RBP2.3□□□□□ -2.04
NUP100YKL068W KES1P35844 434 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W KKQ8P36004 724 aa2.3□□□□□ -2.04
NUP100YKL068W GLG1P36143 616 aa2.3□□□□□ -2.04
NUP100YKL068W MNN2P38069 597 aa2.3□□□□□ -2.04
NUP100YKL068W RFC3P38629 340 aa2.3□□□□□ -2.04
NUP100YKL068W FAD1P38913 306 aa2.3□□□□□ -2.04
NUP100YKL068W SEC31P38968 1273 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W FTR1P40088 404 aa2.3□□□□□ -2.04
NUP100YKL068W IAH1P41734 238 aa2.3□□□□□ -2.04
NUP100YKL068W SMC3P47037 1230 aa2.3□□□□□ -2.04
NUP100YKL068W PRP31P49704 494 aaPredicted RBP2.3□□□□□ -2.04
NUP100YKL068W IMD4P50094 524 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W YGL138CP53122 345 aa2.3□□□□□ -2.04
NUP100YKL068W RTN1Q04947 295 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W HOF1Q05080 669 aa2.3□□□□□ -2.04
NUP100YKL068W ARR1Q06596 294 aa2.3□□□□□ -2.04
NUP100YKL068W RLM1Q12224 676 aa2.3□□□□□ -2.04
NUP100YKL068W UTP10P42945 1769 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W EMC1P25574 760 aa2.3□□□□□ -2.04
NUP100YKL068W RML2P32611 393 aa2.3□□□□□ -2.04
NUP100YKL068W BUD2P33314 1104 aa2.3□□□□□ -2.04
NUP100YKL068W MRPL4P36517 319 aa2.3□□□□□ -2.04
NUP100YKL068W MSG5P38590 489 aa2.3□□□□□ -2.04
NUP100YKL068W MNN9P39107 395 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W ALG5P40350 334 aa2.3□□□□□ -2.04
NUP100YKL068W AIM20P40451 204 aa2.3□□□□□ -2.04
NUP100YKL068W BIT61P47041 543 aa2.3□□□□□ -2.04
NUP100YKL068W YGL185CP53100 379 aa2.3□□□□□ -2.04
NUP100YKL068W TWF1P53250 332 aa2.3□□□□□ -2.04
NUP100YKL068W IPI3P53877 555 aa2.3□□□□□ -2.04
NUP100YKL068W HEF3P53978 1044 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W YDR179W-AQ03983 463 aa2.3□□□□□ -2.04
NUP100YKL068W BUD22Q04347 519 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W SIL1Q08199 421 aa2.3□□□□□ -2.04
NUP100YKL068W GSH2Q08220 491 aa2.3□□□□□ -2.04
NUP100YKL068W SUT2Q12286 268 aa2.3□□□□□ -2.04
NUP100YKL068W RIB2Q12362 591 aaKnown RBP2.3□□□□□ -2.04
NUP100YKL068W ERG20P08524 352 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W GCD2P12754 651 aaPredicted RBP2.29□□□□□ -2.04
NUP100YKL068W MSS116P15424 664 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W UBA1P22515 1024 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W YIH1P25637 258 aa2.29□□□□□ -2.04
NUP100YKL068W WBP1P33767 430 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W TCD2P36101 447 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W PIH1P38768 344 aa2.29□□□□□ -2.04
NUP100YKL068W YHR078WP38799 552 aa2.29□□□□□ -2.04
NUP100YKL068W NUP60P39705 539 aa2.29□□□□□ -2.04
NUP100YKL068W YFL066CP43538 392 aa2.29□□□□□ -2.04
NUP100YKL068W EFM3P47163 339 aa2.29□□□□□ -2.04
NUP100YKL068W TRF5P48561 642 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W APT1P49435 187 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W RMD9P53140 646 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W YNL134CP53912 376 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W MUS81Q04149 632 aaPredicted RBP2.29□□□□□ -2.04
NUP100YKL068W IKI3Q06706 1349 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W VPS13Q07878 3144 aa2.29□□□□□ -2.04
NUP100YKL068W HXK2P04807 486 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W CBP1P07252 654 aa2.29□□□□□ -2.04
NUP100YKL068W RPL43AP0CX25 92 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W RPL43BP0CX26 92 aa2.29□□□□□ -2.04
NUP100YKL068W SCH9P11792 824 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W PDA1P16387 420 aaKnown RBP2.29□□□□□ -2.04
NUP100YKL068W PRP6P19735 899 aaPredicted RBP2.29□□□□□ -2.04
NUP100YKL068W SNT1P25357 1226 aa2.29□□□□□ -2.04
NUP100YKL068W URK1P27515 501 aa2.29□□□□□ -2.04
NUP100YKL068W FAA1P30624 700 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms