RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	LSC1	P53598	329 aa	Known RBP	4.38	□□□□□ -1.71
TFA1	YKL028W	EFM6	P53970	246 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	YML122C	Q03207	126 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	RRB1	Q04225	511 aa	Known RBP	4.38	□□□□□ -1.71
TFA1	YKL028W	RGC1	Q06108	1083 aa	Known RBP	4.38	□□□□□ -1.71
TFA1	YKL028W	YLR413W	Q06689	675 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	COS7	Q07788	383 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	IZH3	Q07959	543 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	YDL007C-A	Q2V2Q0	85 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	YER175W-A	Q8TGU4	54 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	CBP1	P07252	654 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	URA4	P20051	364 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	MRPL25	P23369	157 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	DMC1	P25453	334 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	YBR144C	P34215	104 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	DED81	P38707	554 aa	Known RBP	4.38	□□□□□ -1.71
TFA1	YKL028W	FMO1	P38866	432 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	MNN9	P39107	395 aa	Known RBP	4.38	□□□□□ -1.71
TFA1	YKL028W	SSO2	P39926	295 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	YJL107C	P42947	387 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	FAR3	P46671	204 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	TOM22	P49334	152 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	DIA3	P52290	468 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	PAN2	P53010	1115 aa	Predicted RBP	4.38	□□□□□ -1.71
TFA1	YKL028W	PDS5	Q04264	1277 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	TAP42	Q04372	366 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	ARG7	Q04728	441 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	ATG38	Q05789	226 aa	Known RBP	4.38	□□□□□ -1.71
TFA1	YKL028W	SIL1	Q08199	421 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	MED2	Q12124	431 aa		4.38	□□□□□ -1.71
TFA1	YKL028W	TDH1	P00360	332 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	RNA1	P11745	407 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	KGD2	P19262	463 aa	Predicted RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	KGD1	P20967	1014 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	HMX1	P32339	317 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	CDC5	P32562	705 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	YME1	P32795	747 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	RRP1	P35178	278 aa	Predicted RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	AAP1	P37898	856 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	ATP3	P38077	311 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	LNP1	P38878	278 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	UIP3	P39547	235 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	FUN12	P39730	1002 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	ASG1	P40467	964 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	LOC1	P43586	204 aa	Predicted RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	LIA1	P47120	325 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	MSY1	P48527	492 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	RRP46	P53256	223 aa	Predicted RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	COP1	P53622	1201 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	PRM1	P53835	661 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	UTP6	Q02354	440 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	YDR179W-A	Q03983	463 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	CUR1	Q06469	252 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	NOP12	Q08208	459 aa	Known RBP	4.37	□□□□□ -1.71
TFA1	YKL028W	NPC2	Q12408	173 aa		4.37	□□□□□ -1.71
TFA1	YKL028W	VPS63	O13549	108 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	HXK2	P04807	486 aa	Known RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	ILV5	P06168	395 aa	Known RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	STE3	P06783	470 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	MER1	P16523	270 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	ART10	P18634	518 aa	Known RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	PUP3	P25451	205 aa	Known RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	RDS1	P25611	832 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	MCM4	P30665	933 aa	Known RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	GSH1	P32477	678 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	HES1	P35843	434 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	GLG1	P36143	616 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	FAD1	P38913	306 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	ULP2	P40537	1034 aa	Predicted RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	RPN11	P43588	306 aa	Known RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	YFR018C	P43599	363 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	MPS3	P47069	682 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	SMA1	Q02651	245 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	YMR130W	Q04223	302 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	ULA1	Q12059	462 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	MRPL23	Q12487	163 aa	Predicted RBP	4.36	□□□□□ -1.71
TFA1	YKL028W	SFG1	Q12507	346 aa		4.36	□□□□□ -1.71
TFA1	YKL028W	ARG81	P05085	880 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	SRV2	P17555	526 aa	Known RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	SRP54	P20424	541 aa	Known RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	CAD1	P24813	409 aa	Known RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	PET18	P25362	215 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	YIM1	P28625	365 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	YKT6	P36015	200 aa	Known RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	YBL028C	P38202	106 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	ZTA1	P38230	334 aa	Known RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	RFC3	P38629	340 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	MSR1	P38714	643 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	LIN1	P38852	340 aa	Predicted RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	YIR042C	P40586	236 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	DPB11	P47027	764 aa	Predicted RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	YGR127W	P53275	312 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	CAF130	P53280	1122 aa	Predicted RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	IST1	P53843	298 aa	Predicted RBP	4.35	□□□□□ -1.71
TFA1	YKL028W	DCS1	Q06151	350 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	TY3A-G	Q12173	290 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	NDJ1	Q12366	352 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	TY3A-I	Q99219	290 aa		4.35	□□□□□ -1.71
TFA1	YKL028W	COX1	P00401	534 aa		4.34	□□□□□ -1.71
TFA1	YKL028W	CDC37	P06101	506 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms