RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	NUP133	P36161	1157 aa		3.24	□□□□□ -1.89
CKA1	YIL035C	YEL068C	P39977	110 aa		3.24	□□□□□ -1.89
CKA1	YIL035C	MKT1	P40850	830 aa	Known RBP	3.24	□□□□□ -1.89
CKA1	YIL035C	SIP4	P46954	829 aa		3.24	□□□□□ -1.89
CKA1	YIL035C	DUG3	P53871	357 aa		3.24	□□□□□ -1.89
CKA1	YIL035C	NBP2	Q12163	236 aa		3.24	□□□□□ -1.89
CKA1	YIL035C	PUP3	P25451	205 aa	Known RBP	3.23	□□□□□ -1.89
CKA1	YIL035C	LDB16	P25587	256 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	SAC6	P32599	642 aa	Known RBP	3.23	□□□□□ -1.89
CKA1	YIL035C	MRS6	P32864	603 aa	Known RBP	3.23	□□□□□ -1.89
CKA1	YIL035C	YBL055C	P34220	418 aa	Predicted RBP	3.23	□□□□□ -1.89
CKA1	YIL035C	PMU1	P36069	295 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	MRPL4	P36517	319 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	SNG1	P46950	547 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	DRN1	P53255	507 aa	Known RBP	3.23	□□□□□ -1.89
CKA1	YIL035C	EFM6	P53970	246 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	BNA5	Q05979	453 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	SYO1	Q07395	620 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	SDH5	Q08230	162 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	YCL021W-A	Q96VH3	125 aa		3.23	□□□□□ -1.89
CKA1	YIL035C	PEP5	P12868	1029 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	SGF29	P25554	259 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	YBP1	P38315	674 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	NPR2	P39923	615 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	KAP123	P40069	1113 aa	Known RBP	3.22	□□□□□ -1.89
CKA1	YIL035C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
CKA1	YIL035C	ALT2	P52892	507 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	SHR3	Q02774	210 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	ADD37	Q03233	198 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	VIP1	Q06685	1146 aa	Known RBP	3.22	□□□□□ -1.89
CKA1	YIL035C	YPL272C	Q08984	517 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	NCE102	Q12207	173 aa	RIP-Chip data	3.22	□□□□□ -1.89	not detected
CKA1	YIL035C	YDL009C	Q12210	107 aa		3.22	□□□□□ -1.89
CKA1	YIL035C	CAR1	P00812	333 aa	Known RBP	3.21	□□□□□ -1.9
CKA1	YIL035C	ATR1	P13090	542 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	PMR1	P13586	950 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	RER1	P25560	188 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	FRE1	P32791	686 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	TUL1	P36096	758 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	YKL023W	P36103	277 aa	Known RBP	3.21	□□□□□ -1.9
CKA1	YIL035C	MAL33	P38157	468 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	TPM2	P40414	161 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	PTR3	P43606	678 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	APT1	P49435	187 aa	Known RBP	3.21	□□□□□ -1.9
CKA1	YIL035C	YGL242C	P53066	181 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	WSC2	P53832	503 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	RAD30	Q04049	632 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	TCO89	Q08921	799 aa		3.21	□□□□□ -1.9
CKA1	YIL035C	ARD1	P07347	238 aa	Predicted RBP	3.2	□□□□□ -1.9
CKA1	YIL035C	RNA14	P25298	677 aa	Known RBP	3.2	□□□□□ -1.9
CKA1	YIL035C	BOS1	P25385	244 aa		3.2	□□□□□ -1.9
CKA1	YIL035C	IMG1	P25626	169 aa		3.2	□□□□□ -1.9
CKA1	YIL035C	FAA2	P39518	744 aa		3.2	□□□□□ -1.9
CKA1	YIL035C	SHO1	P40073	367 aa		3.2	□□□□□ -1.9
CKA1	YIL035C	ARC1	P46672	376 aa	Known RBP	3.2	□□□□□ -1.9
CKA1	YIL035C	DSD1	P53095	428 aa		3.2	□□□□□ -1.9
CKA1	YIL035C	SLD5	Q03406	294 aa		3.2	□□□□□ -1.9
CKA1	YIL035C	RRN3	P36070	627 aa		3.19	□□□□□ -1.9
CKA1	YIL035C	RPL32	P38061	130 aa	Known RBP	3.19	□□□□□ -1.9
CKA1	YIL035C	FAR3	P46671	204 aa		3.19	□□□□□ -1.9
CKA1	YIL035C	YJR154W	P47181	346 aa		3.19	□□□□□ -1.9
CKA1	YIL035C	YGR127W	P53275	312 aa		3.19	□□□□□ -1.9
CKA1	YIL035C	MSO1	P53604	210 aa	Known RBP	3.19	□□□□□ -1.9
CKA1	YIL035C	CBK1	P53894	756 aa		3.19	□□□□□ -1.9
CKA1	YIL035C	ATG16	Q03818	150 aa		3.19	□□□□□ -1.9
CKA1	YIL035C	YOR365C	Q08844	703 aa		3.19	□□□□□ -1.9
CKA1	YIL035C	KAR3	P17119	729 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	PUT3	P25502	979 aa	Predicted RBP	3.18	□□□□□ -1.9
CKA1	YIL035C	ICS2	P38284	255 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	HAT2	P39984	401 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	ALG8	P40351	577 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	YGR126W	P53274	230 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	YSA1	Q01976	231 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	MRPL51	Q06090	140 aa	Predicted RBP	3.18	□□□□□ -1.9
CKA1	YIL035C	HNT3	Q08702	217 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	CTF3	Q12748	733 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	YER078W-A	Q3E7A2	54 aa		3.18	□□□□□ -1.9
CKA1	YIL035C	MF(ALPHA)1	P01149	165 aa		3.17	□□□□□ -1.9
CKA1	YIL035C	RAD52	P06778	471 aa	Known RBP	3.17	□□□□□ -1.9
CKA1	YIL035C	FUM1	P08417	488 aa	Known RBP	3.17	□□□□□ -1.9
CKA1	YIL035C	CDC24	P11433	854 aa	Predicted RBP	3.17	□□□□□ -1.9
CKA1	YIL035C	YCR007C	P25354	239 aa		3.17	□□□□□ -1.9
CKA1	YIL035C	SSE2	P32590	693 aa	Known RBP	3.17	□□□□□ -1.9
CKA1	YIL035C	SWE1	P32944	819 aa		3.17	□□□□□ -1.9
CKA1	YIL035C	AUR1	P36107	401 aa	Predicted RBP	3.17	□□□□□ -1.9
CKA1	YIL035C	YHR210C	P38893	341 aa		3.17	□□□□□ -1.9
CKA1	YIL035C	RBG2	P53295	368 aa	Known RBP	3.17	□□□□□ -1.9
CKA1	YIL035C	YDL057W	Q07379	328 aa		3.17	□□□□□ -1.9
CKA1	YIL035C	SUC2	P00724	532 aa		3.16	□□□□□ -1.9
CKA1	YIL035C	YBR144C	P34215	104 aa		3.16	□□□□□ -1.9
CKA1	YIL035C	RFS1	P38234	210 aa	Known RBP	3.16	□□□□□ -1.9
CKA1	YIL035C	PRE5	P40302	234 aa	Known RBP	3.16	□□□□□ -1.9
CKA1	YIL035C	DPH1	P40487	425 aa	Known RBP	3.16	□□□□□ -1.9
CKA1	YIL035C	BSC5	P53755	489 aa		3.16	□□□□□ -1.9
CKA1	YIL035C	SUB1	P54000	292 aa	Known RBP	3.16	□□□□□ -1.9
CKA1	YIL035C	YML131W	Q03102	365 aa		3.16	□□□□□ -1.9
CKA1	YIL035C	IVY1	Q04934	453 aa		3.16	□□□□□ -1.9
CKA1	YIL035C	LUC7	Q07508	261 aa	Predicted RBP	3.16	□□□□□ -1.9
CKA1	YIL035C	SPE4	Q12455	300 aa		3.16	□□□□□ -1.9
CKA1	YIL035C	PEP4	P07267	405 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms