RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W SFC1P33303 322 aa9.91□□□□□ -0.82
UBA4YHR111W SKT5P34226 696 aa9.91□□□□□ -0.82
UBA4YHR111W NUP120P35729 1037 aa9.91□□□□□ -0.82
UBA4YHR111W FMP46P36141 133 aaKnown RBP9.91□□□□□ -0.82
UBA4YHR111W INM1P38710 295 aa9.91□□□□□ -0.82
UBA4YHR111W DHH1P39517 506 aaKnown RBP9.91□□□□□ -0.82
UBA4YHR111W STB2P46679 850 aa9.91□□□□□ -0.82
UBA4YHR111W YMR155WQ03795 547 aa9.91□□□□□ -0.82
UBA4YHR111W YMR034CQ05131 434 aaPredicted RBP9.91□□□□□ -0.82
UBA4YHR111W ATG29Q12092 213 aa9.91□□□□□ -0.82
UBA4YHR111W YPL247CQ12523 523 aa9.91□□□□□ -0.82
UBA4YHR111W IRA1P18963 3092 aa9.9□□□□□ -0.82
UBA4YHR111W MST1P07236 462 aa9.9□□□□□ -0.82
UBA4YHR111W CMP2P14747 604 aa9.9□□□□□ -0.82
UBA4YHR111W PDC5P16467 563 aaKnown RBP9.9□□□□□ -0.82
UBA4YHR111W PTP1P25044 335 aa9.9□□□□□ -0.82
UBA4YHR111W SDH3P33421 198 aa9.9□□□□□ -0.82
UBA4YHR111W PHO89P38361 574 aa9.9□□□□□ -0.82
UBA4YHR111W DMA1P38823 416 aa9.9□□□□□ -0.82
UBA4YHR111W YRB1P41920 201 aaKnown RBP9.9□□□□□ -0.82
UBA4YHR111W ALK1P43633 760 aaKnown RBP9.9□□□□□ -0.82
UBA4YHR111W YJL049WP47048 450 aa9.9□□□□□ -0.82
UBA4YHR111W MDM34P53083 459 aa9.9□□□□□ -0.82
UBA4YHR111W YNL058CP53947 316 aa9.9□□□□□ -0.82
UBA4YHR111W YLR111WQ12528 110 aa9.9□□□□□ -0.82
UBA4YHR111W SEC39Q12745 709 aa9.9□□□□□ -0.82
UBA4YHR111W HEM2P05373 342 aa9.89□□□□□ -0.83
UBA4YHR111W STE3P06783 470 aa9.89□□□□□ -0.83
UBA4YHR111W RIP1P08067 215 aa9.89□□□□□ -0.83
UBA4YHR111W LAT1P12695 482 aaKnown RBP9.89□□□□□ -0.83
UBA4YHR111W HOP1P20050 605 aa9.89□□□□□ -0.83
UBA4YHR111W YCR090CP25654 182 aaKnown RBP9.89□□□□□ -0.83
UBA4YHR111W NTH1P32356 751 aa9.89□□□□□ -0.83
UBA4YHR111W SQT1P35184 431 aa9.89□□□□□ -0.83
UBA4YHR111W VRP1P37370 817 aa9.89□□□□□ -0.83
UBA4YHR111W YHL008CP38750 627 aa9.89□□□□□ -0.83
UBA4YHR111W YER034WP40022 185 aaKnown RBP9.89□□□□□ -0.83
UBA4YHR111W EMP65P40085 556 aa9.89□□□□□ -0.83
UBA4YHR111W NDE1P40215 560 aa9.89□□□□□ -0.83
UBA4YHR111W AXL1P40851 1208 aa9.89□□□□□ -0.83
UBA4YHR111W YJR030CP47101 745 aa9.89□□□□□ -0.83
UBA4YHR111W RIM21P48565 533 aa9.89□□□□□ -0.83
UBA4YHR111W ERG26P53199 349 aaKnown RBP9.89□□□□□ -0.83
UBA4YHR111W SHY1P53266 389 aa9.89□□□□□ -0.83
UBA4YHR111W IST1P53843 298 aaPredicted RBP9.89□□□□□ -0.83
UBA4YHR111W RMI1Q02685 241 aa9.89□□□□□ -0.83
UBA4YHR111W MTQ2Q03920 221 aaPredicted RBP9.89□□□□□ -0.83
UBA4YHR111W RRN11Q04712 507 aa9.89□□□□□ -0.83
UBA4YHR111W TDA5Q06417 326 aaKnown RBP9.89□□□□□ -0.83
UBA4YHR111W LAG2Q92325 660 aa9.89□□□□□ -0.83
UBA4YHR111W RPS4AP0CX35 261 aaKnown RBP9.88□□□□□ -0.83
UBA4YHR111W RPS4BP0CX36 261 aaKnown RBP9.88□□□□□ -0.83
UBA4YHR111W MUD2P36084 527 aaKnown RBP9.88□□□□□ -0.83
UBA4YHR111W SAP1P39955 897 aaKnown RBP9.88□□□□□ -0.83
UBA4YHR111W ESF2P53743 316 aaKnown RBP9.88□□□□□ -0.83
UBA4YHR111W IBD2P53892 351 aa9.88□□□□□ -0.83
UBA4YHR111W SIZ1Q04195 904 aa9.88□□□□□ -0.83
UBA4YHR111W YLR030WQ07967 263 aa9.88□□□□□ -0.83
UBA4YHR111W YOR114WQ12219 294 aa9.88□□□□□ -0.83
UBA4YHR111W YOL107WQ12239 342 aa9.88□□□□□ -0.83
UBA4YHR111W RRP42Q12277 265 aaPredicted RBP9.88□□□□□ -0.83
UBA4YHR111W RGT2Q12300 763 aa9.88□□□□□ -0.83
UBA4YHR111W SRN2Q99176 213 aa9.88□□□□□ -0.83
UBA4YHR111W GAL7P08431 366 aa9.87□□□□□ -0.83
UBA4YHR111W KIN2P13186 1147 aaKnown RBP9.87□□□□□ -0.83
UBA4YHR111W TYR1P20049 452 aa9.87□□□□□ -0.83
UBA4YHR111W MSB1P21339 1137 aaKnown RBP9.87□□□□□ -0.83
UBA4YHR111W BUB3P26449 341 aa9.87□□□□□ -0.83
UBA4YHR111W CRM1P30822 1084 aaKnown RBP9.87□□□□□ -0.83
UBA4YHR111W OAF3P36023 863 aa9.87□□□□□ -0.83
UBA4YHR111W UBS1P38290 277 aa9.87□□□□□ -0.83
UBA4YHR111W RGA1P39083 1007 aa9.87□□□□□ -0.83
UBA4YHR111W ALR2P43553 858 aa9.87□□□□□ -0.83
UBA4YHR111W LIA1P47120 325 aaKnown RBP9.87□□□□□ -0.83
UBA4YHR111W AIF1P52923 378 aa9.87□□□□□ -0.83
UBA4YHR111W EFM5P53200 248 aaKnown RBP9.87□□□□□ -0.83
UBA4YHR111W RCF2P53721 224 aa9.87□□□□□ -0.83
UBA4YHR111W YNL260CP53846 198 aa9.87□□□□□ -0.83
UBA4YHR111W RRP45Q05636 305 aaKnown RBP9.87□□□□□ -0.83
UBA4YHR111W RIF2Q06208 395 aa9.87□□□□□ -0.83
UBA4YHR111W SEC10Q06245 871 aa9.87□□□□□ -0.83
UBA4YHR111W APC9Q12107 265 aa9.87□□□□□ -0.83
UBA4YHR111W BRR1Q99177 341 aaPredicted RBP9.87□□□□□ -0.83
UBA4YHR111W GUK1P15454 187 aaKnown RBP9.86□□□□□ -0.83
UBA4YHR111W YCR006CP25350 157 aa9.86□□□□□ -0.83
UBA4YHR111W KIP2P28743 706 aa9.86□□□□□ -0.83
UBA4YHR111W GGC1P38988 300 aa9.86□□□□□ -0.83
UBA4YHR111W PRM2P40534 656 aa9.86□□□□□ -0.83
UBA4YHR111W YOL073CQ08232 322 aa9.86□□□□□ -0.83
UBA4YHR111W RUD3Q12234 484 aaKnown RBP9.86□□□□□ -0.83
UBA4YHR111W YPR011CQ12251 326 aa9.86□□□□□ -0.83
UBA4YHR111W NUM1Q00402 2748 aa9.86□□□□□ -0.83
UBA4YHR111W TAF14P35189 244 aa9.85□□□□□ -0.83
UBA4YHR111W RIM2P38127 377 aa9.85□□□□□ -0.83
UBA4YHR111W LIN1P38852 340 aaPredicted RBP9.85□□□□□ -0.83
UBA4YHR111W BEM4P39011 633 aa9.85□□□□□ -0.83
UBA4YHR111W COA1P40452 197 aa9.85□□□□□ -0.83
UBA4YHR111W SPG5P42933 373 aa9.85□□□□□ -0.83
UBA4YHR111W KXD1P53158 218 aa9.85□□□□□ -0.83
UBA4YHR111W FHN1P53279 174 aa9.85□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms