RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C SEC66P33754 206 aa3.55□□□□□ -1.84
MSM1YGR171C YBL055CP34220 418 aaPredicted RBP3.55□□□□□ -1.84
MSM1YGR171C SWH1P35845 1188 aa3.55□□□□□ -1.84
MSM1YGR171C BUD27P43573 796 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
MSM1YGR171C ERG26P53199 349 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C BNI5P53890 448 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C LGE1Q02796 332 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C RSC9Q03124 581 aa3.55□□□□□ -1.84
MSM1YGR171C EMI2Q04409 500 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C AIM32Q04689 311 aa3.55□□□□□ -1.84
MSM1YGR171C THI7Q05998 598 aa3.55□□□□□ -1.84
MSM1YGR171C PIG1Q06216 648 aa3.55□□□□□ -1.84
MSM1YGR171C VTA1Q06263 330 aa3.55□□□□□ -1.84
MSM1YGR171C RRP9Q06506 573 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C ETT1Q08421 412 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C PFA4Q12006 378 aa3.55□□□□□ -1.84
MSM1YGR171C PDH1Q12428 516 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C PAR32Q12515 295 aaKnown RBP3.55□□□□□ -1.84
MSM1YGR171C YER145C-AA0A023PYF4 145 aa3.54□□□□□ -1.84
MSM1YGR171C YMR085WP0CF18 432 aa3.54□□□□□ -1.84
MSM1YGR171C CLB1P24868 471 aa3.54□□□□□ -1.84
MSM1YGR171C DPH2P32461 534 aa3.54□□□□□ -1.84
MSM1YGR171C NUP133P36161 1157 aa3.54□□□□□ -1.84
MSM1YGR171C MSR1P38714 643 aa3.54□□□□□ -1.84
MSM1YGR171C DBP8P38719 431 aa3.54□□□□□ -1.84
MSM1YGR171C ZIM17P42844 174 aa3.54□□□□□ -1.84
MSM1YGR171C DLD2P46681 530 aaKnown RBP3.54□□□□□ -1.84
MSM1YGR171C UBP8P50102 471 aa3.54□□□□□ -1.84
MSM1YGR171C ERG13P54839 491 aaKnown RBP3.54□□□□□ -1.84
MSM1YGR171C RPA49Q01080 415 aaPredicted RBP3.54□□□□□ -1.84
MSM1YGR171C RIM13Q03792 727 aa3.54□□□□□ -1.84
MSM1YGR171C RTT109Q07794 436 aa3.54□□□□□ -1.84
MSM1YGR171C YML133CQ03099 1374 aa3.54□□□□□ -1.84
MSM1YGR171C YLL067CQ07888 1374 aa3.54□□□□□ -1.84
MSM1YGR171C YLL066CQ99208 1374 aa3.54□□□□□ -1.84
MSM1YGR171C RPC40P07703 335 aaKnown RBP3.53□□□□□ -1.84
MSM1YGR171C KRS1P15180 591 aaKnown RBP3.53□□□□□ -1.84
MSM1YGR171C CLC1P17891 233 aa3.53□□□□□ -1.84
MSM1YGR171C PUP2P32379 260 aa3.53□□□□□ -1.84
MSM1YGR171C PXL1P36166 706 aa3.53□□□□□ -1.84
MSM1YGR171C ANS1P38832 159 aa3.53□□□□□ -1.84
MSM1YGR171C STB2P46679 850 aa3.53□□□□□ -1.84
MSM1YGR171C NCS2P53923 493 aaPredicted RBP3.53□□□□□ -1.84
MSM1YGR171C ADA2Q02336 434 aa3.53□□□□□ -1.84
MSM1YGR171C ARX1Q03862 593 aaKnown RBP3.53□□□□□ -1.84
MSM1YGR171C GYL1Q04322 720 aa3.53□□□□□ -1.84
MSM1YGR171C ROY1Q04847 553 aa3.53□□□□□ -1.84
MSM1YGR171C ECM30Q06673 1274 aa3.53□□□□□ -1.84
MSM1YGR171C CDC45Q08032 650 aa3.53□□□□□ -1.84
MSM1YGR171C AFI1Q99222 893 aa3.53□□□□□ -1.84
MSM1YGR171C ARG81P05085 880 aa3.53□□□□□ -1.85
MSM1YGR171C RPL3P14126 387 aaKnown RBP3.53□□□□□ -1.85
MSM1YGR171C APE1P14904 514 aa3.53□□□□□ -1.85
MSM1YGR171C GLK1P17709 500 aaKnown RBP3.53□□□□□ -1.85
MSM1YGR171C URA7P28274 579 aaKnown RBP3.53□□□□□ -1.85
MSM1YGR171C MGM1P32266 881 aa3.53□□□□□ -1.85
MSM1YGR171C RPL32P38061 130 aaKnown RBP3.53□□□□□ -1.85
MSM1YGR171C LCB2P40970 561 aa3.53□□□□□ -1.85
MSM1YGR171C MNP1P53163 194 aaPredicted RBP3.53□□□□□ -1.85
MSM1YGR171C PDS5Q04264 1277 aa3.53□□□□□ -1.85
MSM1YGR171C SWF1Q04629 336 aa3.53□□□□□ -1.85
MSM1YGR171C RRI1Q12468 440 aa3.53□□□□□ -1.85
MSM1YGR171C CNA1P23287 553 aa3.52□□□□□ -1.85
MSM1YGR171C BUD5P25300 642 aaPredicted RBP3.52□□□□□ -1.85
MSM1YGR171C SPB1P25582 841 aaPredicted RBP3.52□□□□□ -1.85
MSM1YGR171C SMI1P32566 505 aa3.52□□□□□ -1.85
MSM1YGR171C HCS1P34243 683 aa3.52□□□□□ -1.85
MSM1YGR171C RRF1P38771 230 aa3.52□□□□□ -1.85
MSM1YGR171C CIN4P39110 191 aa3.52□□□□□ -1.85
MSM1YGR171C XBP1P40489 647 aa3.52□□□□□ -1.85
MSM1YGR171C ULP2P40537 1034 aaPredicted RBP3.52□□□□□ -1.85
MSM1YGR171C YTP1P53584 459 aa3.52□□□□□ -1.85
MSM1YGR171C HST1P53685 503 aa3.52□□□□□ -1.85
MSM1YGR171C YNL144CP53907 740 aa3.52□□□□□ -1.85
MSM1YGR171C RSM23Q01163 450 aa3.52□□□□□ -1.85
MSM1YGR171C RBS1Q05672 457 aaKnown RBP3.52□□□□□ -1.85
MSM1YGR171C FMP45Q07651 309 aa3.52□□□□□ -1.85
MSM1YGR171C CUE5Q08412 411 aaKnown RBP3.52□□□□□ -1.85
MSM1YGR171C YDL007C-AQ2V2Q0 85 aa3.52□□□□□ -1.85
MSM1YGR171C ISN1Q99312 450 aa3.52□□□□□ -1.85
MSM1YGR171C GAL4P04386 881 aa3.51□□□□□ -1.85
MSM1YGR171C YML002WP0CF17 737 aa3.51□□□□□ -1.85
MSM1YGR171C MDH1P17505 334 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
MSM1YGR171C YAP1P19880 650 aaKnown RBP3.51□□□□□ -1.85
MSM1YGR171C CPR2P23285 205 aa3.51□□□□□ -1.85
MSM1YGR171C CLB2P24869 491 aa3.51□□□□□ -1.85
MSM1YGR171C BUD14P27637 709 aa3.51□□□□□ -1.85
MSM1YGR171C ERV1P27882 189 aa3.51□□□□□ -1.85
MSM1YGR171C HXT3P32466 567 aaKnown RBP3.51□□□□□ -1.85
MSM1YGR171C TFB1P32776 642 aa3.51□□□□□ -1.85
MSM1YGR171C MIA40P36046 403 aa3.51□□□□□ -1.85
MSM1YGR171C VPS41P38959 992 aa3.51□□□□□ -1.85
MSM1YGR171C PCL7P40186 285 aa3.51□□□□□ -1.85
MSM1YGR171C YIL024CP40543 189 aa3.51□□□□□ -1.85
MSM1YGR171C CAF130P53280 1122 aaPredicted RBP3.51□□□□□ -1.85
MSM1YGR171C COP1P53622 1201 aaKnown RBP3.51□□□□□ -1.85
MSM1YGR171C EAF7P53911 425 aaKnown RBP3.51□□□□□ -1.85
MSM1YGR171C TOF2Q02208 771 aa3.51□□□□□ -1.85
MSM1YGR171C OAZ1Q02803 292 aa3.51□□□□□ -1.85
MSM1YGR171C KAP120Q02932 1032 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms