RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W VPS5Q92331 675 aa4.22□□□□□ -1.73
LSB1YGR136W CCH1P50077 2039 aa4.21□□□□□ -1.74
LSB1YGR136W MSS18P08593 268 aa4.21□□□□□ -1.74
LSB1YGR136W PET122P10355 254 aa4.21□□□□□ -1.74
LSB1YGR136W PYC1P11154 1178 aaKnown RBP4.21□□□□□ -1.74
LSB1YGR136W SAT4P25333 603 aaKnown RBP4.21□□□□□ -1.74
LSB1YGR136W LRE1P25579 583 aaKnown RBP4.21□□□□□ -1.74
LSB1YGR136W YCR051WP25631 222 aa4.21□□□□□ -1.74
LSB1YGR136W RPC19P28000 142 aaKnown RBP4.21□□□□□ -1.74
LSB1YGR136W DGR2P32330 852 aa4.21□□□□□ -1.74
LSB1YGR136W MF(ALPHA)2P32435 120 aa4.21□□□□□ -1.74
LSB1YGR136W RIB7P33312 244 aa4.21□□□□□ -1.74
LSB1YGR136W TKL2P33315 681 aa4.21□□□□□ -1.74
LSB1YGR136W TDA11P38854 504 aa4.21□□□□□ -1.74
LSB1YGR136W STL1P39932 569 aa4.21□□□□□ -1.74
LSB1YGR136W MOB1P40484 314 aa4.21□□□□□ -1.74
LSB1YGR136W SYG1P40528 902 aa4.21□□□□□ -1.74
LSB1YGR136W STB1P42845 420 aa4.21□□□□□ -1.74
LSB1YGR136W QRI7P43122 407 aa4.21□□□□□ -1.74
LSB1YGR136W IRC5P43610 853 aa4.21□□□□□ -1.74
LSB1YGR136W ZAP1P47043 880 aa4.21□□□□□ -1.74
LSB1YGR136W VPS25P47142 202 aa4.21□□□□□ -1.74
LSB1YGR136W ASK10P48361 1146 aa4.21□□□□□ -1.74
LSB1YGR136W RBL2P48606 106 aaKnown RBP4.21□□□□□ -1.74
LSB1YGR136W DSL1P53847 754 aa4.21□□□□□ -1.74
LSB1YGR136W ARG5,6Q01217 863 aa4.21□□□□□ -1.74
LSB1YGR136W YMR027WQ04371 470 aa4.21□□□□□ -1.74
LSB1YGR136W HLR1Q04429 423 aa4.21□□□□□ -1.74
LSB1YGR136W ATG26Q06321 1198 aa4.21□□□□□ -1.74
LSB1YGR136W GPN2Q08726 347 aaPredicted RBP4.21□□□□□ -1.74
LSB1YGR136W GPB1Q08886 897 aa4.21□□□□□ -1.74
LSB1YGR136W LEA1Q08963 238 aaPredicted RBP4.21□□□□□ -1.74
LSB1YGR136W GPM2Q12008 311 aa4.21□□□□□ -1.74
LSB1YGR136W YDR018CQ12185 396 aa4.21□□□□□ -1.74
LSB1YGR136W IES3Q12345 250 aa4.21□□□□□ -1.74
LSB1YGR136W HRT3Q12347 344 aa4.21□□□□□ -1.74
LSB1YGR136W ARP7Q12406 477 aa4.21□□□□□ -1.74
LSB1YGR136W BEM2P39960 2167 aaKnown RBP4.2□□□□□ -1.74
LSB1YGR136W TPK1P06244 397 aa4.2□□□□□ -1.74
LSB1YGR136W RAD10P06838 210 aa4.2□□□□□ -1.74
LSB1YGR136W HMG2P12684 1045 aa4.2□□□□□ -1.74
LSB1YGR136W YPK1P12688 680 aaKnown RBP4.2□□□□□ -1.74
LSB1YGR136W CDC26P14724 124 aa4.2□□□□□ -1.74
LSB1YGR136W APE1P14904 514 aa4.2□□□□□ -1.74
LSB1YGR136W HEM15P16622 393 aa4.2□□□□□ -1.74
LSB1YGR136W SLY1P22213 666 aa4.2□□□□□ -1.74
LSB1YGR136W PHO3P24031 467 aa4.2□□□□□ -1.74
LSB1YGR136W KAR4P25583 335 aa4.2□□□□□ -1.74
LSB1YGR136W IMG2P25642 146 aaPredicted RBP4.2□□□□□ -1.74
LSB1YGR136W SSH4P32343 579 aa4.2□□□□□ -1.74
LSB1YGR136W SRB2P34162 210 aa4.2□□□□□ -1.74
LSB1YGR136W YBR056WP38081 501 aa4.2□□□□□ -1.74
LSB1YGR136W HEK2P38199 381 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
LSB1YGR136W LYS9P38999 446 aa4.2□□□□□ -1.74
LSB1YGR136W DUN1P39009 513 aa4.2□□□□□ -1.74
LSB1YGR136W ERP2P39704 215 aa4.2□□□□□ -1.74
LSB1YGR136W SCS2P40075 244 aaKnown RBP4.2□□□□□ -1.74
LSB1YGR136W DSE1P40077 573 aa4.2□□□□□ -1.74
LSB1YGR136W RPT2P40327 437 aaKnown RBP4.2□□□□□ -1.74
LSB1YGR136W VHR1P40522 640 aa4.2□□□□□ -1.74
LSB1YGR136W YIL054WP40524 105 aa4.2□□□□□ -1.74
LSB1YGR136W AXL1P40851 1208 aa4.2□□□□□ -1.74
LSB1YGR136W TMA22P47089 198 aaPredicted RBP4.2□□□□□ -1.74
LSB1YGR136W LSG1P53145 640 aaKnown RBP4.2□□□□□ -1.74
LSB1YGR136W YNL144CP53907 740 aa4.2□□□□□ -1.74
LSB1YGR136W TEP1P53916 434 aa4.2□□□□□ -1.74
LSB1YGR136W YNL040WP53960 456 aaPredicted RBP4.2□□□□□ -1.74
LSB1YGR136W KTR5P53966 522 aaPredicted RBP4.2□□□□□ -1.74
LSB1YGR136W MTD1Q02046 320 aaKnown RBP4.2□□□□□ -1.74
LSB1YGR136W YKR005CQ02203 525 aa4.2□□□□□ -1.74
LSB1YGR136W RCF1Q03713 159 aa4.2□□□□□ -1.74
LSB1YGR136W USA1Q03714 838 aa4.2□□□□□ -1.74
LSB1YGR136W YML108WQ03759 105 aa4.2□□□□□ -1.74
LSB1YGR136W HMO1Q03973 246 aaKnown RBP4.2□□□□□ -1.74
LSB1YGR136W PLP1Q04004 230 aa4.2□□□□□ -1.74
LSB1YGR136W ECM38Q05902 660 aaPredicted RBP4.2□□□□□ -1.74
LSB1YGR136W YDL073WQ07454 984 aa4.2□□□□□ -1.74
LSB1YGR136W VAM6Q07468 1049 aa4.2□□□□□ -1.74
LSB1YGR136W APC5Q08683 685 aa4.2□□□□□ -1.74
LSB1YGR136W YOL114CQ12322 202 aa4.2□□□□□ -1.74
LSB1YGR136W NCA2Q12374 616 aa4.2□□□□□ -1.74
LSB1YGR136W EMP46Q12396 444 aa4.2□□□□□ -1.74
LSB1YGR136W RRD2Q12461 358 aa4.2□□□□□ -1.74
LSB1YGR136W FAB1P34756 2278 aa4.2□□□□□ -1.74
LSB1YGR136W ILV2P07342 687 aaKnown RBP4.19□□□□□ -1.74
LSB1YGR136W CDC24P11433 854 aaPredicted RBP4.19□□□□□ -1.74
LSB1YGR136W GLN4P13188 809 aaKnown RBP4.19□□□□□ -1.74
LSB1YGR136W SRV2P17555 526 aaKnown RBP4.19□□□□□ -1.74
LSB1YGR136W ATP12P22135 325 aa4.19□□□□□ -1.74
LSB1YGR136W PEX34P25584 144 aa4.19□□□□□ -1.74
LSB1YGR136W MGT1P26188 188 aa4.19□□□□□ -1.74
LSB1YGR136W PPZ1P26570 692 aa4.19□□□□□ -1.74
LSB1YGR136W MEI4P29467 408 aa4.19□□□□□ -1.74
LSB1YGR136W GPI10P30777 616 aa4.19□□□□□ -1.74
LSB1YGR136W TPS2P31688 896 aaKnown RBP4.19□□□□□ -1.74
LSB1YGR136W VPH2P32341 215 aa4.19□□□□□ -1.74
LSB1YGR136W NIP1P32497 812 aaKnown RBP4.19□□□□□ -1.74
LSB1YGR136W NPL6P32832 435 aa4.19□□□□□ -1.74
LSB1YGR136W DUG2P38149 878 aa4.19□□□□□ -1.74
LSB1YGR136W YLF2P38746 405 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms