RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W PLB1P39105 664 aa3.63□□□□□ -1.83
SPT6YGR116W SWD1P39706 426 aa3.63□□□□□ -1.83
SPT6YGR116W EAF5P39995 279 aa3.63□□□□□ -1.83
SPT6YGR116W RPT2P40327 437 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W SWM2P40342 146 aa3.63□□□□□ -1.83
SPT6YGR116W ASG7P46993 209 aa3.63□□□□□ -1.83
SPT6YGR116W ARH1P48360 493 aa3.63□□□□□ -1.83
SPT6YGR116W ELP3Q02908 557 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W YDR514CQ04408 483 aa3.63□□□□□ -1.83
SPT6YGR116W ECM30Q06673 1274 aa3.63□□□□□ -1.83
SPT6YGR116W SHS1Q07657 551 aa3.63□□□□□ -1.83
SPT6YGR116W YAH1Q12184 172 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W MIS1P09440 975 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W DSF1P0CX08 502 aa3.63□□□□□ -1.83
SPT6YGR116W YNR073CP0CX09 502 aa3.63□□□□□ -1.83
SPT6YGR116W INO1P11986 533 aa3.63□□□□□ -1.83
SPT6YGR116W GUK1P15454 187 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W KIN82P25341 720 aa3.63□□□□□ -1.83
SPT6YGR116W BUB2P26448 306 aaPredicted RBP3.63□□□□□ -1.83
SPT6YGR116W PPQ1P32945 549 aa3.63□□□□□ -1.83
SPT6YGR116W BIT2P38346 545 aa3.63□□□□□ -1.83
SPT6YGR116W YGR210CP42942 411 aa3.63□□□□□ -1.83
SPT6YGR116W GYP8P43570 497 aa3.63□□□□□ -1.83
SPT6YGR116W CCT8P47079 568 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W COG1P53079 417 aa3.63□□□□□ -1.83
SPT6YGR116W YGR127WP53275 312 aa3.63□□□□□ -1.83
SPT6YGR116W RNY1Q02933 434 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W MDM32Q12171 622 aa3.63□□□□□ -1.83
SPT6YGR116W RAD59Q12223 238 aa3.63□□□□□ -1.83
SPT6YGR116W MDY2Q12285 212 aa3.63□□□□□ -1.83
SPT6YGR116W PST2Q12335 198 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W MDM12Q92328 271 aa3.63□□□□□ -1.83
SPT6YGR116W MRP2P10663 115 aaPredicted RBP3.63□□□□□ -1.83
SPT6YGR116W ART10P18634 518 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W PKC1P24583 1151 aa3.63□□□□□ -1.83
SPT6YGR116W DPH2P32461 534 aa3.63□□□□□ -1.83
SPT6YGR116W KAP122P32767 1081 aa3.63□□□□□ -1.83
SPT6YGR116W FRE2P36033 711 aa3.63□□□□□ -1.83
SPT6YGR116W PHO88P38264 188 aaPredicted RBP3.63□□□□□ -1.83
SPT6YGR116W EXO1P39875 702 aa3.63□□□□□ -1.83
SPT6YGR116W MIT1P40002 666 aa3.63□□□□□ -1.83
SPT6YGR116W MDE1P47095 244 aa3.63□□□□□ -1.83
SPT6YGR116W RPS12P48589 143 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W YPT32P51996 222 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W PEX31P53203 462 aa3.63□□□□□ -1.83
SPT6YGR116W YNL146WP53906 100 aa3.63□□□□□ -1.83
SPT6YGR116W EFR3Q03653 782 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W VHS1Q03785 461 aa3.63□□□□□ -1.83
SPT6YGR116W YDR109CQ04585 715 aa3.63□□□□□ -1.83
SPT6YGR116W HEL2Q05580 639 aaKnown RBP3.63□□□□□ -1.83
SPT6YGR116W DXO1Q06349 442 aa3.63□□□□□ -1.83
SPT6YGR116W ASR1Q06834 288 aa3.63□□□□□ -1.83
SPT6YGR116W YOL159CQ08300 171 aa3.63□□□□□ -1.83
SPT6YGR116W TSC13Q99190 310 aa3.63□□□□□ -1.83
SPT6YGR116W ABF1P14164 731 aa3.62□□□□□ -1.83
SPT6YGR116W SIR1P21691 654 aa3.62□□□□□ -1.83
SPT6YGR116W IDP1P21954 428 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W CPR3P25719 182 aa3.62□□□□□ -1.83
SPT6YGR116W CIN8P27895 1000 aa3.62□□□□□ -1.83
SPT6YGR116W ARP2P32381 391 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W IMP3P32899 183 aaPredicted RBP3.62□□□□□ -1.83
SPT6YGR116W MAK5P38112 773 aaPredicted RBP3.62□□□□□ -1.83
SPT6YGR116W YHK8P38776 514 aa3.62□□□□□ -1.83
SPT6YGR116W RTT105P40063 208 aa3.62□□□□□ -1.83
SPT6YGR116W YJL049WP47048 450 aa3.62□□□□□ -1.83
SPT6YGR116W ECM27P47144 725 aa3.62□□□□□ -1.83
SPT6YGR116W GPI8P49018 411 aa3.62□□□□□ -1.83
SPT6YGR116W BIO3P50277 480 aa3.62□□□□□ -1.83
SPT6YGR116W SCY1P53009 804 aa3.62□□□□□ -1.83
SPT6YGR116W GTF1P53260 183 aaPredicted RBP3.62□□□□□ -1.83
SPT6YGR116W APP1P53933 587 aa3.62□□□□□ -1.83
SPT6YGR116W RSM28Q03430 361 aa3.62□□□□□ -1.83
SPT6YGR116W CRF1Q04930 467 aa3.62□□□□□ -1.83
SPT6YGR116W DCS1Q06151 350 aa3.62□□□□□ -1.83
SPT6YGR116W SYT1Q06836 1226 aa3.62□□□□□ -1.83
SPT6YGR116W SAM4Q08985 325 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W ACF2Q12168 779 aa3.62□□□□□ -1.83
SPT6YGR116W YGK3Q12222 375 aaPredicted RBP3.62□□□□□ -1.83
SPT6YGR116W IDI1P15496 288 aa3.62□□□□□ -1.83
SPT6YGR116W TRM1P15565 570 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W FUN30P31380 1131 aa3.62□□□□□ -1.83
SPT6YGR116W TOD6P34219 525 aa3.62□□□□□ -1.83
SPT6YGR116W MBA1P38300 278 aa3.62□□□□□ -1.83
SPT6YGR116W GEM1P39722 662 aa3.62□□□□□ -1.83
SPT6YGR116W VMA13P41807 478 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W RPN11P43588 306 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W IRC18P47056 224 aa3.62□□□□□ -1.83
SPT6YGR116W NOP13P53883 403 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SPT6YGR116W RRN5Q02983 363 aa3.62□□□□□ -1.83
SPT6YGR116W AIM36Q03798 255 aa3.62□□□□□ -1.83
SPT6YGR116W PDR8Q06149 701 aa3.62□□□□□ -1.83
SPT6YGR116W CRN1Q06440 651 aa3.62□□□□□ -1.83
SPT6YGR116W YLL007CQ07799 665 aa3.62□□□□□ -1.83
SPT6YGR116W YHR213W-AQ8TGT4 77 aa3.62□□□□□ -1.83
SPT6YGR116W SIR3P06701 978 aa3.62□□□□□ -1.83
SPT6YGR116W SEC53P07283 254 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W TRX2P22803 104 aaKnown RBP3.62□□□□□ -1.83
SPT6YGR116W GRR1P24814 1151 aa3.62□□□□□ -1.83
SPT6YGR116W THI4P32318 326 aa3.62□□□□□ -1.83
SPT6YGR116W SEC61P32915 480 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms