RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W DSD1P53095 428 aa3.28□□□□□ -1.88
LOC1YFR001W DUG3P53871 357 aa3.28□□□□□ -1.88
LOC1YFR001W SAM50P53969 484 aa3.28□□□□□ -1.88
LOC1YFR001W RHO4Q00246 291 aa3.28□□□□□ -1.88
LOC1YFR001W YDL121CQ07541 149 aa3.28□□□□□ -1.88
LOC1YFR001W THI20Q08224 551 aa3.28□□□□□ -1.88
LOC1YFR001W NCE102Q12207 173 aaRIP-Chip data3.28□□□□□ -1.88not detected
LOC1YFR001W YPT6Q99260 215 aa3.28□□□□□ -1.88
LOC1YFR001W PEP5P12868 1029 aa3.27□□□□□ -1.89
LOC1YFR001W ART10P18634 518 aaKnown RBP3.27□□□□□ -1.89
LOC1YFR001W FMP46P36141 133 aaKnown RBP3.27□□□□□ -1.89
LOC1YFR001W RRP3P38712 501 aaKnown RBP3.27□□□□□ -1.89
LOC1YFR001W CIN4P39110 191 aa3.27□□□□□ -1.89
LOC1YFR001W YTA12P40341 825 aa3.27□□□□□ -1.89
LOC1YFR001W YGR126WP53274 230 aa3.27□□□□□ -1.89
LOC1YFR001W CRZ1P53968 678 aa3.27□□□□□ -1.89
LOC1YFR001W RPC11Q04307 110 aaPredicted RBP3.27□□□□□ -1.89
LOC1YFR001W RBA50Q04418 439 aa3.27□□□□□ -1.89
LOC1YFR001W CDC45Q08032 650 aa3.27□□□□□ -1.89
LOC1YFR001W SDH5Q08230 162 aa3.27□□□□□ -1.89
LOC1YFR001W YMR230W-AQ3E7B5 62 aa3.27□□□□□ -1.89
LOC1YFR001W YML002WP0CF17 737 aa3.26□□□□□ -1.89
LOC1YFR001W MRS3P10566 314 aa3.26□□□□□ -1.89
LOC1YFR001W PDA1P16387 420 aaKnown RBP3.26□□□□□ -1.89
LOC1YFR001W EST1P17214 699 aaPredicted RBP3.26□□□□□ -1.89
LOC1YFR001W OLE1P21147 510 aaKnown RBP3.26□□□□□ -1.89
LOC1YFR001W VPS17P32913 551 aa3.26□□□□□ -1.89
LOC1YFR001W ECM15P35195 104 aa3.26□□□□□ -1.89
LOC1YFR001W YKL023WP36103 277 aaKnown RBP3.26□□□□□ -1.89
LOC1YFR001W CCT4P39078 528 aaKnown RBP3.26□□□□□ -1.89
LOC1YFR001W MRX6P48564 524 aa3.26□□□□□ -1.89
LOC1YFR001W YGL082WP53155 381 aa3.26□□□□□ -1.89
LOC1YFR001W DRN1P53255 507 aaKnown RBP3.26□□□□□ -1.89
LOC1YFR001W BUD32P53323 261 aa3.26□□□□□ -1.89
LOC1YFR001W SHR3Q02774 210 aa3.26□□□□□ -1.89
LOC1YFR001W YMR087WQ04299 284 aa3.26□□□□□ -1.89
LOC1YFR001W GLO2Q05584 274 aa3.26□□□□□ -1.89
LOC1YFR001W YDL057WQ07379 328 aa3.26□□□□□ -1.89
LOC1YFR001W CTI6Q08923 506 aa3.26□□□□□ -1.89
LOC1YFR001W RCN2Q12044 265 aa3.26□□□□□ -1.89
LOC1YFR001W TIP41Q12199 356 aa3.26□□□□□ -1.89
LOC1YFR001W YJR112W-AQ3E743 109 aa3.26□□□□□ -1.89
LOC1YFR001W SGS1P35187 1447 aa3.26□□□□□ -1.89
LOC1YFR001W TOP1P04786 769 aa3.25□□□□□ -1.89
LOC1YFR001W PHO2P07269 559 aa3.25□□□□□ -1.89
LOC1YFR001W SEC62P21825 274 aa3.25□□□□□ -1.89
LOC1YFR001W ELO2P25358 347 aa3.25□□□□□ -1.89
LOC1YFR001W SGF29P25554 259 aa3.25□□□□□ -1.89
LOC1YFR001W IMP2'P32351 346 aa3.25□□□□□ -1.89
LOC1YFR001W SEF1P34228 1148 aa3.25□□□□□ -1.89
LOC1YFR001W ALG5P40350 334 aa3.25□□□□□ -1.89
LOC1YFR001W VID30P53076 958 aa3.25□□□□□ -1.89
LOC1YFR001W IPI3P53877 555 aa3.25□□□□□ -1.89
LOC1YFR001W RPM2Q02773 1202 aa3.25□□□□□ -1.89
LOC1YFR001W HCR1Q05775 265 aaKnown RBP3.25□□□□□ -1.89
LOC1YFR001W IMH1Q06704 911 aaKnown RBP3.25□□□□□ -1.89
LOC1YFR001W BUD21Q08492 214 aaPredicted RBP3.25□□□□□ -1.89
LOC1YFR001W YOR365CQ08844 703 aa3.25□□□□□ -1.89
LOC1YFR001W PEP4P07267 405 aaKnown RBP3.24□□□□□ -1.89
LOC1YFR001W SUI2P20459 304 aaKnown RBP3.24□□□□□ -1.89
LOC1YFR001W YNK1P36010 153 aaKnown RBP3.24□□□□□ -1.89
LOC1YFR001W YHR210CP38893 341 aa3.24□□□□□ -1.89
LOC1YFR001W DHH1P39517 506 aaKnown RBP3.24□□□□□ -1.89
LOC1YFR001W CSM2P40465 213 aa3.24□□□□□ -1.89
LOC1YFR001W SGN1P40561 250 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
LOC1YFR001W IKS1P47042 667 aa3.24□□□□□ -1.89
LOC1YFR001W IMD4P50094 524 aaKnown RBP3.24□□□□□ -1.89
LOC1YFR001W ALT2P52892 507 aa3.24□□□□□ -1.89
LOC1YFR001W COQ9Q05779 260 aa3.24□□□□□ -1.89
LOC1YFR001W YTH1Q06102 208 aaPredicted RBP3.24□□□□□ -1.89
LOC1YFR001W CBS1P14066 229 aa3.23□□□□□ -1.89
LOC1YFR001W APE1P14904 514 aa3.23□□□□□ -1.89
LOC1YFR001W PEP3P27801 918 aa3.23□□□□□ -1.89
LOC1YFR001W SIP2P34164 415 aaKnown RBP3.23□□□□□ -1.89
LOC1YFR001W TCD2P36101 447 aaKnown RBP3.23□□□□□ -1.89
LOC1YFR001W REG2P38232 338 aa3.23□□□□□ -1.89
LOC1YFR001W OSH3P38713 996 aaKnown RBP3.23□□□□□ -1.89
LOC1YFR001W YJR154WP47181 346 aa3.23□□□□□ -1.89
LOC1YFR001W ARE2P53629 642 aaKnown RBP3.23□□□□□ -1.89
LOC1YFR001W VPS75P53853 264 aa3.23□□□□□ -1.89
LOC1YFR001W TOF2Q02208 771 aa3.23□□□□□ -1.89
LOC1YFR001W VPS38Q05919 439 aa3.23□□□□□ -1.89
LOC1YFR001W HSH49Q99181 213 aaPredicted RBP3.23□□□□□ -1.89
LOC1YFR001W SUC2P00724 532 aa3.22□□□□□ -1.89
LOC1YFR001W GCN4P03069 281 aa3.22□□□□□ -1.89
LOC1YFR001W RAD52P06778 471 aaKnown RBP3.22□□□□□ -1.89
LOC1YFR001W MET8P15807 274 aa3.22□□□□□ -1.89
LOC1YFR001W PRO3P32263 286 aaKnown RBP3.22□□□□□ -1.89
LOC1YFR001W LOS1P33418 1100 aaPredicted RBP3.22□□□□□ -1.89
LOC1YFR001W SHP1P34223 423 aa3.22□□□□□ -1.89
LOC1YFR001W YBR225WP38321 900 aa3.22□□□□□ -1.89
LOC1YFR001W MSR1P38714 643 aa3.22□□□□□ -1.89
LOC1YFR001W VPS52P39904 641 aa3.22□□□□□ -1.89
LOC1YFR001W YGR066CP53242 292 aa3.22□□□□□ -1.89
LOC1YFR001W RTT103Q05543 409 aa3.22□□□□□ -1.89
LOC1YFR001W BNA5Q05979 453 aa3.22□□□□□ -1.89
LOC1YFR001W SYO1Q07395 620 aa3.22□□□□□ -1.89
LOC1YFR001W RLM1Q12224 676 aa3.22□□□□□ -1.89
LOC1YFR001W AVL9Q12500 764 aa3.22□□□□□ -1.89
LOC1YFR001W GAL80P04387 435 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms