RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W YML133CQ03099 1374 aa2.43□□□□□ -2.02
SDC1YDR469W YLL067CQ07888 1374 aa2.43□□□□□ -2.02
SDC1YDR469W YLL066CQ99208 1374 aa2.43□□□□□ -2.02
SDC1YDR469W RPL3P14126 387 aaKnown RBP2.42□□□□□ -2.02
SDC1YDR469W POT1P27796 417 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SDC1YDR469W URA7P28274 579 aaKnown RBP2.42□□□□□ -2.02
SDC1YDR469W AUR1P36107 401 aaPredicted RBP2.42□□□□□ -2.02
SDC1YDR469W CST26P38226 397 aa2.42□□□□□ -2.02
SDC1YDR469W VID24P38263 362 aa2.42□□□□□ -2.02
SDC1YDR469W RRF1P38771 230 aa2.42□□□□□ -2.02
SDC1YDR469W YHR054CP38780 354 aa2.42□□□□□ -2.02
SDC1YDR469W IME4P41833 600 aa2.42□□□□□ -2.02
SDC1YDR469W OCA1P50946 238 aaPredicted RBP2.42□□□□□ -2.02
SDC1YDR469W COS12P53053 380 aa2.42□□□□□ -2.02
SDC1YDR469W YGL036WP53185 909 aaPredicted RBP2.42□□□□□ -2.02
SDC1YDR469W NNF2P53253 936 aa2.42□□□□□ -2.02
SDC1YDR469W JJJ1P53863 590 aa2.42□□□□□ -2.02
SDC1YDR469W MTG1Q03151 367 aaPredicted RBP2.42□□□□□ -2.02
SDC1YDR469W HOT1Q03213 719 aa2.42□□□□□ -2.02
SDC1YDR469W ARX1Q03862 593 aaKnown RBP2.42□□□□□ -2.02
SDC1YDR469W DPB4Q04603 196 aaKnown RBP2.42□□□□□ -2.02
SDC1YDR469W APL5Q08951 932 aaKnown RBP2.42□□□□□ -2.02
SDC1YDR469W SPE3Q12074 293 aaKnown RBP2.42□□□□□ -2.02
SDC1YDR469W SPE4Q12455 300 aa2.42□□□□□ -2.02
SDC1YDR469W CTF3Q12748 733 aa2.42□□□□□ -2.02
SDC1YDR469W YJR112W-AQ3E743 109 aa2.42□□□□□ -2.02
SDC1YDR469W GAL80P04387 435 aa2.41□□□□□ -2.02
SDC1YDR469W URK1P27515 501 aa2.41□□□□□ -2.02
SDC1YDR469W MSP1P28737 362 aa2.41□□□□□ -2.02
SDC1YDR469W PUP2P32379 260 aa2.41□□□□□ -2.02
SDC1YDR469W RIB7P33312 244 aa2.41□□□□□ -2.02
SDC1YDR469W PMT1P33775 817 aa2.41□□□□□ -2.02
SDC1YDR469W TIF3P34167 436 aaKnown RBP2.41□□□□□ -2.02
SDC1YDR469W SIF2P38262 535 aa2.41□□□□□ -2.02
SDC1YDR469W RTT105P40063 208 aa2.41□□□□□ -2.02
SDC1YDR469W ASG1P40467 964 aa2.41□□□□□ -2.02
SDC1YDR469W SEC24P40482 926 aaKnown RBP2.41□□□□□ -2.02
SDC1YDR469W MET28P40573 187 aa2.41□□□□□ -2.02
SDC1YDR469W BUD27P43573 796 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SDC1YDR469W VPS25P47142 202 aa2.41□□□□□ -2.02
SDC1YDR469W TCB2P48231 1178 aa2.41□□□□□ -2.02
SDC1YDR469W YGR066CP53242 292 aa2.41□□□□□ -2.02
SDC1YDR469W YNR068CP53754 272 aa2.41□□□□□ -2.02
SDC1YDR469W TOF1P53840 1238 aa2.41□□□□□ -2.02
SDC1YDR469W YAT1P80235 687 aa2.41□□□□□ -2.02
SDC1YDR469W MUB1Q03162 620 aa2.41□□□□□ -2.02
SDC1YDR469W TLG1Q03322 224 aa2.41□□□□□ -2.02
SDC1YDR469W BUD22Q04347 519 aaKnown RBP2.41□□□□□ -2.02
SDC1YDR469W HEL2Q05580 639 aaKnown RBP2.41□□□□□ -2.02
SDC1YDR469W VPS38Q05919 439 aa2.41□□□□□ -2.02
SDC1YDR469W MMR1Q06324 491 aa2.41□□□□□ -2.02
SDC1YDR469W YDL242WQ07746 117 aa2.41□□□□□ -2.02
SDC1YDR469W YEH1Q07804 573 aa2.41□□□□□ -2.02
SDC1YDR469W ATG29Q12092 213 aa2.41□□□□□ -2.02
SDC1YDR469W SWT1Q12104 458 aa2.41□□□□□ -2.02
SDC1YDR469W RPN5Q12250 445 aaKnown RBP2.41□□□□□ -2.02
SDC1YDR469W YPT6Q99260 215 aa2.41□□□□□ -2.02
SDC1YDR469W YBR085C-AO43137 85 aa2.4□□□□□ -2.03
SDC1YDR469W DFR1P07807 211 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SDC1YDR469W YML002WP0CF17 737 aa2.4□□□□□ -2.03
SDC1YDR469W PHO84P25297 587 aaKnown RBP2.4□□□□□ -2.03
SDC1YDR469W GYP6P32806 458 aa2.4□□□□□ -2.03
SDC1YDR469W SWH1P35845 1188 aa2.4□□□□□ -2.03
SDC1YDR469W PCA1P38360 1216 aa2.4□□□□□ -2.03
SDC1YDR469W OTU2P38747 307 aaKnown RBP2.4□□□□□ -2.03
SDC1YDR469W ERC1P38767 581 aa2.4□□□□□ -2.03
SDC1YDR469W LNP1P38878 278 aa2.4□□□□□ -2.03
SDC1YDR469W YHR218WP38899 603 aa2.4□□□□□ -2.03
SDC1YDR469W OSW5P40219 148 aa2.4□□□□□ -2.03
SDC1YDR469W CTK2P46962 323 aa2.4□□□□□ -2.03
SDC1YDR469W PET130P47065 347 aa2.4□□□□□ -2.03
SDC1YDR469W RPS7BP48164 190 aaKnown RBP2.4□□□□□ -2.03
SDC1YDR469W MNP1P53163 194 aaPredicted RBP2.4□□□□□ -2.03
SDC1YDR469W HST1P53685 503 aa2.4□□□□□ -2.03
SDC1YDR469W IPI3P53877 555 aa2.4□□□□□ -2.03
SDC1YDR469W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SDC1YDR469W GTB1Q04924 702 aa2.4□□□□□ -2.03
SDC1YDR469W LUC7Q07508 261 aaPredicted RBP2.4□□□□□ -2.03
SDC1YDR469W PML1Q07930 204 aaPredicted RBP2.4□□□□□ -2.03
SDC1YDR469W APL4Q12028 832 aa2.4□□□□□ -2.03
SDC1YDR469W CFT2Q12102 859 aaPredicted RBP2.4□□□□□ -2.03
SDC1YDR469W MDY2Q12285 212 aa2.4□□□□□ -2.03
SDC1YDR469W ARD1P07347 238 aaPredicted RBP2.39□□□□□ -2.03
SDC1YDR469W CPR2P23285 205 aa2.39□□□□□ -2.03
SDC1YDR469W GRR1P24814 1151 aa2.39□□□□□ -2.03
SDC1YDR469W YIH1P25637 258 aa2.39□□□□□ -2.03
SDC1YDR469W RFA2P26754 273 aaKnown RBP2.39□□□□□ -2.03
SDC1YDR469W CDC15P27636 974 aa2.39□□□□□ -2.03
SDC1YDR469W MSS51P32335 436 aa2.39□□□□□ -2.03
SDC1YDR469W PPQ1P32945 549 aa2.39□□□□□ -2.03
SDC1YDR469W SEF1P34228 1148 aa2.39□□□□□ -2.03
SDC1YDR469W HEL1P36113 551 aa2.39□□□□□ -2.03
SDC1YDR469W UIP5P36137 443 aa2.39□□□□□ -2.03
SDC1YDR469W ADH5P38113 351 aaKnown RBP2.39□□□□□ -2.03
SDC1YDR469W RRT2P38332 387 aa2.39□□□□□ -2.03
SDC1YDR469W WSS1P38838 269 aa2.39□□□□□ -2.03
SDC1YDR469W ARO9P38840 513 aaPredicted RBP2.39□□□□□ -2.03
SDC1YDR469W BUR6P40096 142 aa2.39□□□□□ -2.03
SDC1YDR469W PKP1P40530 394 aa2.39□□□□□ -2.03
SDC1YDR469W FET5P43561 622 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms