RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeastyeast

Gene FCF1, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FCF1YDR339C YPT6Q99260 215 aa3.9□□□□□ -1.79
FCF1YDR339C MF(ALPHA)1P01149 165 aa3.89□□□□□ -1.79
FCF1YDR339C YPK1P12688 680 aaKnown RBP3.89□□□□□ -1.79
FCF1YDR339C SRP54P20424 541 aaKnown RBP3.89□□□□□ -1.79
FCF1YDR339C STE50P25344 346 aa3.89□□□□□ -1.79
FCF1YDR339C RFA2P26754 273 aaKnown RBP3.89□□□□□ -1.79
FCF1YDR339C PAP1P29468 568 aaKnown RBP3.89□□□□□ -1.79
FCF1YDR339C PRX1P34227 261 aaKnown RBP3.89□□□□□ -1.79
FCF1YDR339C SEF1P34228 1148 aa3.89□□□□□ -1.79
FCF1YDR339C NTR2P36118 322 aaPredicted RBP3.89□□□□□ -1.79
FCF1YDR339C APE3P37302 537 aaKnown RBP3.89□□□□□ -1.79
FCF1YDR339C ULP2P40537 1034 aaPredicted RBP3.89□□□□□ -1.79
FCF1YDR339C FAR3P46671 204 aa3.89□□□□□ -1.79
FCF1YDR339C YJL055WP47044 245 aa3.89□□□□□ -1.79
FCF1YDR339C MSY1P48527 492 aa3.89□□□□□ -1.79
FCF1YDR339C TWF1P53250 332 aa3.89□□□□□ -1.79
FCF1YDR339C COQ6P53318 479 aa3.89□□□□□ -1.79
FCF1YDR339C MAK10Q02197 733 aa3.89□□□□□ -1.79
FCF1YDR339C TRS23Q03784 219 aa3.89□□□□□ -1.79
FCF1YDR339C SML1Q04964 104 aa3.89□□□□□ -1.79
FCF1YDR339C GPN2Q08726 347 aaPredicted RBP3.89□□□□□ -1.79
FCF1YDR339C NUP188P52593 1655 aaKnown RBP3.89□□□□□ -1.79
FCF1YDR339C AUS1Q08409 1394 aa3.89□□□□□ -1.79
FCF1YDR339C MLP1Q02455 1875 aaKnown RBP3.88□□□□□ -1.79
FCF1YDR339C ILS1P09436 1072 aaKnown RBP3.88□□□□□ -1.79
FCF1YDR339C MDH1P17505 334 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
FCF1YDR339C PET123P17558 318 aa3.88□□□□□ -1.79
FCF1YDR339C STE4P18851 423 aa3.88□□□□□ -1.79
FCF1YDR339C RRP43P25359 394 aaPredicted RBP3.88□□□□□ -1.79
FCF1YDR339C YCR051WP25631 222 aa3.88□□□□□ -1.79
FCF1YDR339C GPI10P30777 616 aa3.88□□□□□ -1.79
FCF1YDR339C SYN8P31377 255 aa3.88□□□□□ -1.79
FCF1YDR339C HSP104P31539 908 aaKnown RBP3.88□□□□□ -1.79
FCF1YDR339C PUP2P32379 260 aa3.88□□□□□ -1.79
FCF1YDR339C RRP1P35178 278 aaPredicted RBP3.88□□□□□ -1.79
FCF1YDR339C CMC1P36064 111 aa3.88□□□□□ -1.79
FCF1YDR339C VBA2P38358 474 aaKnown RBP3.88□□□□□ -1.79
FCF1YDR339C ERC1P38767 581 aa3.88□□□□□ -1.79
FCF1YDR339C GDI1P39958 451 aaKnown RBP3.88□□□□□ -1.79
FCF1YDR339C YEL057CP39983 233 aa3.88□□□□□ -1.79
FCF1YDR339C PKP1P40530 394 aa3.88□□□□□ -1.79
FCF1YDR339C CTK2P46962 323 aa3.88□□□□□ -1.79
FCF1YDR339C DIA3P52290 468 aa3.88□□□□□ -1.79
FCF1YDR339C YGL036WP53185 909 aaPredicted RBP3.88□□□□□ -1.79
FCF1YDR339C ART5P53244 586 aaKnown RBP3.88□□□□□ -1.79
FCF1YDR339C BTN2P53286 410 aa3.88□□□□□ -1.79
FCF1YDR339C YMR102CQ03177 834 aa3.88□□□□□ -1.79
FCF1YDR339C YDR109CQ04585 715 aa3.88□□□□□ -1.79
FCF1YDR339C ERB1Q04660 807 aaKnown RBP3.88□□□□□ -1.79
FCF1YDR339C VTA1Q06263 330 aa3.88□□□□□ -1.79
FCF1YDR339C TLG2Q08144 397 aa3.88□□□□□ -1.79
FCF1YDR339C BUD7Q08754 746 aa3.88□□□□□ -1.79
FCF1YDR339C LCB4Q12246 624 aa3.88□□□□□ -1.79
FCF1YDR339C SPE4Q12455 300 aa3.88□□□□□ -1.79
FCF1YDR339C ZPS1Q12512 249 aa3.88□□□□□ -1.79
FCF1YDR339C YKL068W-AQ3E826 78 aa3.88□□□□□ -1.79
FCF1YDR339C YMR084WA2P2R3 262 aa3.87□□□□□ -1.79
FCF1YDR339C COX1P00401 534 aa3.87□□□□□ -1.79
FCF1YDR339C ARD1P07347 238 aaPredicted RBP3.87□□□□□ -1.79
FCF1YDR339C MRPL9P31334 269 aa3.87□□□□□ -1.79
FCF1YDR339C CBF5P33322 483 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
FCF1YDR339C SWH1P35845 1188 aa3.87□□□□□ -1.79
FCF1YDR339C STB6P36085 766 aa3.87□□□□□ -1.79
FCF1YDR339C RXT2P38255 430 aa3.87□□□□□ -1.79
FCF1YDR339C CCT6P39079 546 aa3.87□□□□□ -1.79
FCF1YDR339C RIO2P40160 425 aaKnown RBP3.87□□□□□ -1.79
FCF1YDR339C ALG5P40350 334 aa3.87□□□□□ -1.79
FCF1YDR339C SEC28P40509 296 aaKnown RBP3.87□□□□□ -1.79
FCF1YDR339C STB2P46679 850 aa3.87□□□□□ -1.79
FCF1YDR339C DPB11P47027 764 aaPredicted RBP3.87□□□□□ -1.79
FCF1YDR339C SGF73P53165 657 aa3.87□□□□□ -1.79
FCF1YDR339C UBP16Q02863 499 aa3.87□□□□□ -1.79
FCF1YDR339C RSM28Q03430 361 aa3.87□□□□□ -1.79
FCF1YDR339C YDR239CQ03780 787 aa3.87□□□□□ -1.79
FCF1YDR339C MRD1Q06106 887 aaKnown RBP3.87□□□□□ -1.79
FCF1YDR339C LUC7Q07508 261 aaPredicted RBP3.87□□□□□ -1.79
FCF1YDR339C YPL272CQ08984 517 aa3.87□□□□□ -1.79
FCF1YDR339C PDH1Q12428 516 aaKnown RBP3.87□□□□□ -1.79
FCF1YDR339C SEC39Q12745 709 aa3.87□□□□□ -1.79
FCF1YDR339C DDP1Q99321 188 aaKnown RBP3.87□□□□□ -1.79
FCF1YDR339C SEC7P11075 2009 aaKnown RBP3.87□□□□□ -1.79
FCF1YDR339C CPA2P03965 1118 aaKnown RBP3.86□□□□□ -1.79
FCF1YDR339C FRS2P15625 503 aaKnown RBP3.86□□□□□ -1.79
FCF1YDR339C RNR3P21672 869 aaKnown RBP3.86□□□□□ -1.79
FCF1YDR339C AMD2P22580 549 aa3.86□□□□□ -1.79
FCF1YDR339C SSE2P32590 693 aaKnown RBP3.86□□□□□ -1.79
FCF1YDR339C ECM32P32644 1121 aaKnown RBP3.86□□□□□ -1.79
FCF1YDR339C MRE11P32829 692 aa3.86□□□□□ -1.79
FCF1YDR339C SEC66P33754 206 aa3.86□□□□□ -1.79
FCF1YDR339C GCS1P35197 352 aa3.86□□□□□ -1.79
FCF1YDR339C YPT10P38146 199 aa3.86□□□□□ -1.79
FCF1YDR339C GDT1P38301 280 aaPredicted RBP3.86□□□□□ -1.79
FCF1YDR339C BUR6P40096 142 aa3.86□□□□□ -1.79
FCF1YDR339C DOT5P40553 215 aa3.86□□□□□ -1.79
FCF1YDR339C PSA1P41940 361 aaKnown RBP3.86□□□□□ -1.79
FCF1YDR339C MEP2P41948 499 aa3.86□□□□□ -1.79
FCF1YDR339C IRC8P47046 822 aa3.86□□□□□ -1.79
FCF1YDR339C OCA1P50946 238 aaPredicted RBP3.86□□□□□ -1.79
FCF1YDR339C PEX25Q02969 394 aa3.86□□□□□ -1.79
FCF1YDR339C PLM2Q04383 521 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms