RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	HIP1	P06775	603 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	ILV2	P07342	687 aa	Known RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	DAD2	P36162	133 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	ICS2	P38284	255 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	BDH2	P39713	417 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	TDA10	P42938	290 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	ECM27	P47144	725 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	ASN1	P49089	572 aa	Known RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	YGR127W	P53275	312 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	YNR068C	P53754	272 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	KTR5	P53966	522 aa	Predicted RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	AAT1	Q01802	451 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	PRP3	Q03338	469 aa	Predicted RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	ACL4	Q03771	387 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	YMR160W	Q03823	816 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	FRE3	Q08905	711 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	CFT2	Q12102	859 aa	Predicted RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	RPL31B	P0C2H9	113 aa	Known RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	YML002W	P0CF17	737 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	TKL1	P23254	680 aa	Known RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	BOS1	P25385	244 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	SPB1	P25582	841 aa	Predicted RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	MSP1	P28737	362 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	RPL32	P38061	130 aa	Known RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	ATF1	P40353	525 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	CDC1	P40986	491 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	AIM22	P47051	409 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	YGR149W	P48236	432 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	ALT2	P52892	507 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	MLC1	P53141	149 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	CPR8	P53728	308 aa		2.83	□□□□□ -1.96
TFB1	YDR311W	RRP9	Q06506	573 aa	Known RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	MRH1	Q12117	320 aa	Predicted RBP	2.83	□□□□□ -1.96
TFB1	YDR311W	RPL7A	P05737	244 aa	Known RBP	2.82	□□□□□ -1.96
TFB1	YDR311W	SPO7	P18410	259 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	PMA2	P19657	947 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	PHO84	P25297	587 aa	Known RBP	2.82	□□□□□ -1.96
TFB1	YDR311W	NIP100	P33420	868 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	ARP1	P38696	384 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	KEL1	P38853	1164 aa	Known RBP	2.82	□□□□□ -1.96
TFB1	YDR311W	ERV46	P39727	415 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	YJL107C	P42947	387 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	COS5	P47187	383 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	YGL138C	P53122	345 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	YTP1	P53584	459 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	RSM23	Q01163	450 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	DBP9	Q06218	594 aa	Known RBP	2.82	□□□□□ -1.96
TFB1	YDR311W	COS7	Q07788	383 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	RPL7B	Q12213	244 aa	Known RBP	2.82	□□□□□ -1.96
TFB1	YDR311W	TAD3	Q9URQ3	322 aa		2.82	□□□□□ -1.96
TFB1	YDR311W	ADE5,7	P07244	802 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	SPE2	P21182	396 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	GAC1	P28006	793 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	OSW5	P40219	148 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	YJL132W	P47014	750 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	IMD3	P50095	523 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	ERG26	P53199	349 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	PRO2	P54885	456 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	TOF2	Q02208	771 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	PFA5	Q03289	374 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	GIS1	Q03833	894 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	EMI2	Q04409	500 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	ECM30	Q06673	1274 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	YDL057W	Q07379	328 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	NCE102	Q12207	173 aa	RIP-Chip data	2.81	□□□□□ -1.96	not detected
TFB1	YDR311W	RAP1	P11938	827 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	URA4	P20051	364 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	MAK32	P23060	363 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	YCR006C	P25350	157 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	SPC110	P32380	944 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	PIM1	P36775	1133 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	PFF1	P38244	976 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	NTC20	P38302	140 aa	Predicted RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	FAD1	P38913	306 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	MBB1	P39534	108 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	PCL7	P40186	285 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	STB4	P50104	949 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	RPT4	P53549	437 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	SKO1	Q02100	647 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	RRP45	Q05636	305 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	ADE13	Q05911	482 aa	Known RBP	2.81	□□□□□ -1.96
TFB1	YDR311W	YLR455W	Q06188	304 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	THI3	Q07471	609 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	APL4	Q12028	832 aa		2.81	□□□□□ -1.96
TFB1	YDR311W	COR1	P07256	457 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	GPA1	P08539	472 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	MRP2	P10663	115 aa	Predicted RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	ARO3	P14843	370 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	BUD5	P25300	642 aa	Predicted RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	AFG1	P32317	509 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	YEL043W	P32618	956 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	EMP70	P32802	667 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	MTR2	P34232	184 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	DBP8	P38719	431 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	CIN4	P39110	191 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	TIF4631	P39935	952 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	YMR147W	P40218	223 aa	Known RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	ATG27	P46989	271 aa		2.8	□□□□□ -1.96
TFB1	YDR311W	OCA1	P50946	238 aa	Predicted RBP	2.8	□□□□□ -1.96
TFB1	YDR311W	SHE4	P51534	789 aa		2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 74.7 ms