RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	NTO1	Q12311	748 aa		5.85	□□□□□ -1.47
CHL4	YDR254W	ATG11	Q12527	1178 aa		5.85	□□□□□ -1.47
CHL4	YDR254W	YOS9	Q99220	542 aa		5.85	□□□□□ -1.47
CHL4	YDR254W	YLR149C	Q99296	730 aa		5.85	□□□□□ -1.47
CHL4	YDR254W	SAM1	P10659	382 aa	Known RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	YAK1	P14680	807 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	SEC63	P14906	663 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	CDC23	P16522	626 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	UGA1	P17649	471 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	APA2	P22108	325 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	RVS161	P25343	265 aa	Known RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	ADY2	P25613	283 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	BEM1	P29366	551 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	AIM26	P32858	118 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	SLA2	P33338	968 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	KES1	P35844	434 aa	Known RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	AKL1	P38080	1108 aa	Known RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	RPN3	P40016	523 aa	Known RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	ZRG8	P40021	1076 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	ALG5	P40350	334 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	FMC1	P40491	155 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	MPS3	P47069	682 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	HAM1	P47119	197 aa	Known RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	BRO1	P48582	844 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	CAF130	P53280	1122 aa	Predicted RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	CSL4	P53859	292 aa	Predicted RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	SPO19	Q03029	223 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	NGL2	Q03264	515 aa	Known RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	YDR239C	Q03780	787 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	PPN1	Q04119	674 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	ATG23	Q06671	453 aa		5.84	□□□□□ -1.47
CHL4	YDR254W	LEA1	Q08963	238 aa	Predicted RBP	5.84	□□□□□ -1.47
CHL4	YDR254W	RPS3	P05750	240 aa	Known RBP	5.83	□□□□□ -1.48
CHL4	YDR254W	ILV5	P06168	395 aa	Known RBP	5.83	□□□□□ -1.48
CHL4	YDR254W	HIP1	P06775	603 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	DPB2	P24482	689 aa	Predicted RBP	5.83	□□□□□ -1.48
CHL4	YDR254W	ERG8	P24521	451 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	YCL068C	P25593	260 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	YCR061W	P25639	631 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	MVD1	P32377	396 aa	Known RBP	5.83	□□□□□ -1.48
CHL4	YDR254W	YME1	P32795	747 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	CYM1	P32898	989 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	KAP104	P38217	918 aa	Known RBP	5.83	□□□□□ -1.48
CHL4	YDR254W	SFB3	P38810	929 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	SET5	P38890	526 aa	Known RBP	5.83	□□□□□ -1.48
CHL4	YDR254W	SNZ3	P43545	298 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	YGL185C	P53100	379 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	YGR126W	P53274	230 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	RTT102	P53330	157 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	SNZ2	P53824	298 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	ARP4	P80428	489 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	URH1	Q04179	340 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	RBS1	Q05672	457 aa	Known RBP	5.83	□□□□□ -1.48
CHL4	YDR254W	ECM30	Q06673	1274 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	YFH1	Q07540	174 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	XYL2	Q07993	356 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	BUD7	Q08754	746 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	NUS1	Q12063	375 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	AEP3	Q12089	606 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	GPR1	Q12361	961 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	YPT6	Q99260	215 aa		5.83	□□□□□ -1.48
CHL4	YDR254W	SKI3	P17883	1432 aa	Known RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	URA3	P03962	267 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	ARG4	P04076	463 aa	Predicted RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	MET3	P08536	511 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	RPL3	P14126	387 aa	Known RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	SPE2	P21182	396 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	UTR1	P21373	530 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	MRPL8	P22353	238 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	ZIP1	P31111	875 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	PRO3	P32263	286 aa	Known RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	PMT1	P33775	817 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	RRP1	P35178	278 aa	Predicted RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	CMC1	P36064	111 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	MRPL10	P36520	322 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	MAL33	P38157	468 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	CDS1	P38221	457 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	PFF1	P38244	976 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	EGD2	P38879	174 aa	Known RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	MLH1	P38920	769 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.82	□□□□□ -1.48	not detected
CHL4	YDR254W	BUD8	P41698	603 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	BNA6	P43619	295 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	ECM27	P47144	725 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	YGL114W	P53134	725 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	TNA1	P53322	534 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	RPT4	P53549	437 aa	Known RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	DUS1	P53759	423 aa	Known RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	SLT2	Q00772	484 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	MUS81	Q04149	632 aa	Predicted RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	ARG7	Q04728	441 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	GFD1	Q04839	188 aa	Known RBP	5.82	□□□□□ -1.48
CHL4	YDR254W	GMC2	Q06201	188 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	SEC10	Q06245	871 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	VPS74	Q06385	345 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	GPN3	Q06543	272 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	UPC2	Q12151	913 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	SPE4	Q12455	300 aa		5.82	□□□□□ -1.48
CHL4	YDR254W	REV3	P14284	1504 aa		5.81	□□□□□ -1.48
CHL4	YDR254W	TCB3	Q03640	1545 aa	Known RBP	5.81	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms