RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YEL020CP39994 560 aa2.11□□□□□ -2.07
SIR4YDR227W RMD9P53140 646 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W YNL181WP53878 407 aa2.11□□□□□ -2.07
SIR4YDR227W STP1Q00947 519 aa2.11□□□□□ -2.07
SIR4YDR227W RPL6AQ02326 176 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W YLR001CQ07895 862 aa2.11□□□□□ -2.07
SIR4YDR227W SRO7Q12038 1033 aa2.11□□□□□ -2.07
SIR4YDR227W YDL109CQ12103 647 aa2.11□□□□□ -2.07
SIR4YDR227W MRH1Q12117 320 aaPredicted RBP2.11□□□□□ -2.07
SIR4YDR227W TIP41Q12199 356 aa2.11□□□□□ -2.07
SIR4YDR227W AI5_BETAQ9ZZX0 354 aa2.11□□□□□ -2.07
SIR4YDR227W RPS28BP0C0X0 67 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W SEC12P11655 471 aa2.11□□□□□ -2.07
SIR4YDR227W URA4P20051 364 aa2.11□□□□□ -2.07
SIR4YDR227W YCP4P25349 247 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W EMC1P25574 760 aa2.11□□□□□ -2.07
SIR4YDR227W AMN1P38285 549 aaPredicted RBP2.11□□□□□ -2.07
SIR4YDR227W KEL1P38853 1164 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W SEC9P40357 651 aa2.11□□□□□ -2.07
SIR4YDR227W SHQ1P40486 507 aaPredicted RBP2.11□□□□□ -2.07
SIR4YDR227W DUG1P43616 481 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W INP52P50942 1183 aa2.11□□□□□ -2.07
SIR4YDR227W MIG2P53035 382 aa2.11□□□□□ -2.07
SIR4YDR227W AAT1Q01802 451 aa2.11□□□□□ -2.07
SIR4YDR227W YSA1Q01976 231 aa2.11□□□□□ -2.07
SIR4YDR227W PFA5Q03289 374 aa2.11□□□□□ -2.07
SIR4YDR227W GRX3Q03835 250 aa2.11□□□□□ -2.07
SIR4YDR227W BCP1Q06338 283 aa2.11□□□□□ -2.07
SIR4YDR227W YOR059CQ08448 450 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W AKR2Q12013 749 aa2.11□□□□□ -2.07
SIR4YDR227W RPN5Q12250 445 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W SUL2Q12325 893 aa2.11□□□□□ -2.07
SIR4YDR227W RRI1Q12468 440 aa2.11□□□□□ -2.07
SIR4YDR227W RPS28AQ3E7X9 67 aaPredicted RBP2.11□□□□□ -2.07
SIR4YDR227W VPS63O13549 108 aa2.1□□□□□ -2.07
SIR4YDR227W CHS1P08004 1131 aa2.1□□□□□ -2.07
SIR4YDR227W PHO91P27514 894 aa2.1□□□□□ -2.07
SIR4YDR227W ARP2P32381 391 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W SIP1P32578 815 aa2.1□□□□□ -2.07
SIR4YDR227W MNS1P32906 549 aa2.1□□□□□ -2.07
SIR4YDR227W MDJ1P35191 511 aa2.1□□□□□ -2.07
SIR4YDR227W SHM2P37291 469 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W KAP104P38217 918 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W IRC24P40580 263 aa2.1□□□□□ -2.07
SIR4YDR227W RLP7P40693 322 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W YGR250CP53316 781 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W SOK2P53438 785 aaPredicted RBP2.1□□□□□ -2.07
SIR4YDR227W ISU1Q03020 165 aa2.1□□□□□ -2.07
SIR4YDR227W RRP9Q06506 573 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W NUS1Q12063 375 aa2.1□□□□□ -2.07
SIR4YDR227W RGT2Q12300 763 aa2.1□□□□□ -2.07
SIR4YDR227W HIS4P00815 799 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W PAB1P04147 577 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SIR4YDR227W RPS16AP0CX51 143 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W RPS16BP0CX52 143 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W YAK1P14680 807 aa2.1□□□□□ -2.07
SIR4YDR227W OCA4P25366 362 aa2.1□□□□□ -2.07
SIR4YDR227W PPA2P28239 310 aa2.1□□□□□ -2.07
SIR4YDR227W CYS3P31373 394 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W VMA6P32366 345 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W SCD5P34758 872 aa2.1□□□□□ -2.07
SIR4YDR227W MMS4P38257 691 aa2.1□□□□□ -2.07
SIR4YDR227W SWD1P39706 426 aa2.1□□□□□ -2.07
SIR4YDR227W ZRG8P40021 1076 aa2.1□□□□□ -2.07
SIR4YDR227W PCL6P40038 420 aa2.1□□□□□ -2.07
SIR4YDR227W YRB2P40517 327 aa2.1□□□□□ -2.07
SIR4YDR227W PTR3P43606 678 aa2.1□□□□□ -2.07
SIR4YDR227W GTO1P48239 356 aa2.1□□□□□ -2.07
SIR4YDR227W ARC35P53731 342 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W PET117Q02771 107 aa2.1□□□□□ -2.07
SIR4YDR227W VHS3Q08438 674 aa2.1□□□□□ -2.07
SIR4YDR227W YOR012WQ12351 137 aa2.1□□□□□ -2.07
SIR4YDR227W PSO2P30620 661 aa2.1□□□□□ -2.07
SIR4YDR227W STE14P32584 239 aa2.1□□□□□ -2.07
SIR4YDR227W PET127P32606 800 aa2.1□□□□□ -2.07
SIR4YDR227W MDL2P33311 773 aa2.1□□□□□ -2.07
SIR4YDR227W GDH2P33327 1092 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W PMT1P33775 817 aa2.1□□□□□ -2.07
SIR4YDR227W KAE1P36132 386 aa2.1□□□□□ -2.07
SIR4YDR227W ECM21P38167 1117 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W PTC7P38797 343 aa2.1□□□□□ -2.07
SIR4YDR227W STT3P39007 718 aaKnown RBP2.1□□□□□ -2.07
SIR4YDR227W NTA1P40354 457 aa2.1□□□□□ -2.07
SIR4YDR227W YFL054CP43549 646 aa2.1□□□□□ -2.07
SIR4YDR227W RGD2P43556 714 aa2.1□□□□□ -2.07
SIR4YDR227W LAM5P43560 674 aa2.1□□□□□ -2.07
SIR4YDR227W YML6P51998 286 aa2.1□□□□□ -2.07
SIR4YDR227W MRP51Q02950 344 aa2.1□□□□□ -2.07
SIR4YDR227W YPL191CQ08930 360 aa2.1□□□□□ -2.07
SIR4YDR227W PER33Q12144 273 aa2.1□□□□□ -2.07
SIR4YDR227W FKS1P38631 1876 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W BIK1P11709 440 aa2.09□□□□□ -2.07
SIR4YDR227W FPR1P20081 114 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W SLA1P32790 1244 aa2.09□□□□□ -2.07
SIR4YDR227W STE13P33894 931 aa2.09□□□□□ -2.07
SIR4YDR227W GLG1P36143 616 aa2.09□□□□□ -2.07
SIR4YDR227W NOP16P40007 231 aaKnown RBP2.09□□□□□ -2.07
SIR4YDR227W AGE2P40529 298 aa2.09□□□□□ -2.07
SIR4YDR227W MPS3P47069 682 aa2.09□□□□□ -2.07
SIR4YDR227W MSE1P48525 536 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms