RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB17	YDL146W	TMN3	P40071	706 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	YTA12	P40341	825 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	SNM1	P40993	198 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	APT1	P49435	187 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	LSB1	P53281	241 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	INA17	Q02888	182 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	ABZ2	Q03266	374 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	MRPL1	Q04599	285 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	RBS1	Q05672	457 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	ARR3	Q06598	404 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	NBL1	Q3E7Y6	73 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	PDA1	P16387	420 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	VMA16	P23968	213 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	YCR061W	P25639	631 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	CRM1	P30822	1084 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	SPC110	P32380	944 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	HXT3	P32466	567 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	RML2	P32611	393 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	YNG2	P38806	282 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	SEC31	P38968	1273 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	PMT6	P42934	759 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	SMC3	P47037	1230 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	IRC8	P47046	822 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	RPN9	Q04062	393 aa	Known RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	ECM18	Q04623	453 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	MSC3	Q05812	728 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	RRT8	Q08219	342 aa		4.81	□□□□□ -1.64
LDB17	YDL146W	FMP40	Q08968	688 aa	Predicted RBP	4.81	□□□□□ -1.64
LDB17	YDL146W	YML133C	Q03099	1374 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	YLL067C	Q07888	1374 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	YLL066C	Q99208	1374 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	RNA1	P11745	407 aa	Known RBP	4.8	□□□□□ -1.64
LDB17	YDL146W	MRP4	P32902	394 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	PAC2	P39937	518 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	MIT1	P40002	666 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	MRK1	P50873	501 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	LSC1	P53598	329 aa	Known RBP	4.8	□□□□□ -1.64
LDB17	YDL146W	YNL143C	P53908	130 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	RPC11	Q04307	110 aa	Predicted RBP	4.8	□□□□□ -1.64
LDB17	YDL146W	TAP42	Q04372	366 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	ATG38	Q05789	226 aa	Known RBP	4.8	□□□□□ -1.64
LDB17	YDL146W	RLM1	Q12224	676 aa		4.8	□□□□□ -1.64
LDB17	YDL146W	MER1	P16523	270 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	YJU2	P28320	278 aa	Predicted RBP	4.79	□□□□□ -1.64
LDB17	YDL146W	MRPL4	P36517	319 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	SER3	P40054	469 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	ALG5	P40350	334 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	IMD4	P50094	524 aa	Known RBP	4.79	□□□□□ -1.64
LDB17	YDL146W	RSM28	Q03430	361 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	FIN1	Q03898	291 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	YDR179W-A	Q03983	463 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	MRI1	Q06489	411 aa	Known RBP	4.79	□□□□□ -1.64
LDB17	YDL146W	YLR413W	Q06689	675 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	GPN2	Q08726	347 aa	Predicted RBP	4.79	□□□□□ -1.64
LDB17	YDL146W	PLP2	Q12017	286 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	MDM20	Q12387	796 aa	Known RBP	4.79	□□□□□ -1.64
LDB17	YDL146W	YBR255C-A	Q3E776	120 aa		4.79	□□□□□ -1.64
LDB17	YDL146W	CBP2	P03874	630 aa	Predicted RBP	4.78	□□□□□ -1.64
LDB17	YDL146W	GCD2	P12754	651 aa	Predicted RBP	4.78	□□□□□ -1.64
LDB17	YDL146W	PRD1	P25375	712 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	IDH2	P28241	369 aa	Known RBP	4.78	□□□□□ -1.64
LDB17	YDL146W	TUL1	P36096	758 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	DED81	P38707	554 aa	Known RBP	4.78	□□□□□ -1.64
LDB17	YDL146W	YJL132W	P47014	750 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	LIA1	P47120	325 aa	Known RBP	4.78	□□□□□ -1.64
LDB17	YDL146W	YGR149W	P48236	432 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	YGL138C	P53122	345 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	YGR054W	P53235	642 aa	Known RBP	4.78	□□□□□ -1.64
LDB17	YDL146W	VPS20	Q04272	221 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	FRE3	Q08905	711 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	AFT2	Q08957	416 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	AEP3	Q12089	606 aa		4.78	□□□□□ -1.64
LDB17	YDL146W	PRS5	Q12265	496 aa	Known RBP	4.78	□□□□□ -1.64
LDB17	YDL146W	MF(ALPHA)1	P01149	165 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	PDE1	P22434	369 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	UBA1	P22515	1024 aa	Known RBP	4.77	□□□□□ -1.65
LDB17	YDL146W	MRPL25	P23369	157 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	FAA1	P30624	700 aa	Known RBP	4.77	□□□□□ -1.65
LDB17	YDL146W	RRP1	P35178	278 aa	Predicted RBP	4.77	□□□□□ -1.65
LDB17	YDL146W	PFF1	P38244	976 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	NTC20	P38302	140 aa	Predicted RBP	4.77	□□□□□ -1.65
LDB17	YDL146W	ASG1	P40467	964 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	ELP2	P42935	788 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	EFM3	P47163	339 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	FMS1	P50264	508 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	IPI3	P53877	555 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	SKO1	Q02100	647 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	USA1	Q03714	838 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	ACL4	Q03771	387 aa		4.77	□□□□□ -1.65
LDB17	YDL146W	SUP35	P05453	685 aa	Known RBP	4.76	□□□□□ -1.65
LDB17	YDL146W	SPO7	P18410	259 aa		4.76	□□□□□ -1.65
LDB17	YDL146W	STE4	P18851	423 aa		4.76	□□□□□ -1.65
LDB17	YDL146W	RFA2	P26754	273 aa	Known RBP	4.76	□□□□□ -1.65
LDB17	YDL146W	NDI1	P32340	513 aa		4.76	□□□□□ -1.65
LDB17	YDL146W	SSE2	P32590	693 aa	Known RBP	4.76	□□□□□ -1.65
LDB17	YDL146W	TIF3	P34167	436 aa	Known RBP	4.76	□□□□□ -1.65
LDB17	YDL146W	YBL055C	P34220	418 aa	Predicted RBP	4.76	□□□□□ -1.65
LDB17	YDL146W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
LDB17	YDL146W	PIM1	P36775	1133 aa		4.76	□□□□□ -1.65
LDB17	YDL146W	MNN2	P38069	597 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms