RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C ECM9Q02202 377 aa5.12□□□□□ -1.59
SCM3YDL139C ERV41Q04651 352 aa5.12□□□□□ -1.59
SCM3YDL139C GLO2Q05584 274 aa5.12□□□□□ -1.59
SCM3YDL139C ENT4Q07872 247 aa5.12□□□□□ -1.59
SCM3YDL139C NRT1Q08485 598 aa5.12□□□□□ -1.59
SCM3YDL139C GPM3Q12326 303 aa5.12□□□□□ -1.59
SCM3YDL139C LDB17Q12342 491 aa5.12□□□□□ -1.59
SCM3YDL139C ARP7Q12406 477 aa5.12□□□□□ -1.59
SCM3YDL139C RAD3P06839 778 aa5.11□□□□□ -1.59
SCM3YDL139C YPK1P12688 680 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C CLN1P20437 546 aa5.11□□□□□ -1.59
SCM3YDL139C PDE1P22434 369 aa5.11□□□□□ -1.59
SCM3YDL139C YCL068CP25593 260 aa5.11□□□□□ -1.59
SCM3YDL139C BEM1P29366 551 aa5.11□□□□□ -1.59
SCM3YDL139C RAD16P31244 790 aa5.11□□□□□ -1.59
SCM3YDL139C MVD1P32377 396 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C DAL3P32459 195 aa5.11□□□□□ -1.59
SCM3YDL139C SIP2P34164 415 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C SET3P36124 751 aa5.11□□□□□ -1.59
SCM3YDL139C YSW1P38280 609 aa5.11□□□□□ -1.59
SCM3YDL139C HSM3P38348 480 aa5.11□□□□□ -1.59
SCM3YDL139C GND1P38720 489 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C DSN1P40568 576 aa5.11□□□□□ -1.59
SCM3YDL139C VMA13P41807 478 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C MNN11P46985 422 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C AIF1P52923 378 aa5.11□□□□□ -1.59
SCM3YDL139C COQ6P53318 479 aa5.11□□□□□ -1.59
SCM3YDL139C VAC7P53950 1165 aa5.11□□□□□ -1.59
SCM3YDL139C KTR5P53966 522 aaPredicted RBP5.11□□□□□ -1.59
SCM3YDL139C SLT2Q00772 484 aa5.11□□□□□ -1.59
SCM3YDL139C LEE1Q02799 301 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C GSF2Q04697 403 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C YSH1Q06224 779 aaPredicted RBP5.11□□□□□ -1.59
SCM3YDL139C CMS1Q07897 291 aaKnown RBP5.11□□□□□ -1.59
SCM3YDL139C TRE2Q08693 809 aa5.11□□□□□ -1.59
SCM3YDL139C MRH1Q12117 320 aaPredicted RBP5.11□□□□□ -1.59
SCM3YDL139C NDJ1Q12366 352 aa5.11□□□□□ -1.59
SCM3YDL139C YPL247CQ12523 523 aa5.11□□□□□ -1.59
SCM3YDL139C AFI1Q99222 893 aa5.11□□□□□ -1.59
SCM3YDL139C STE2D6VTK4 431 aa5.1□□□□□ -1.59
SCM3YDL139C HEM12P32347 362 aaPredicted RBP5.1□□□□□ -1.59
SCM3YDL139C MRS6P32864 603 aaKnown RBP5.1□□□□□ -1.59
SCM3YDL139C RIM2P38127 377 aa5.1□□□□□ -1.59
SCM3YDL139C ATG12P38316 186 aa5.1□□□□□ -1.59
SCM3YDL139C YHR131CP38835 850 aa5.1□□□□□ -1.59
SCM3YDL139C HXT6P39003 570 aaKnown RBP5.1□□□□□ -1.59
SCM3YDL139C HXT7P39004 570 aa5.1□□□□□ -1.59
SCM3YDL139C YJL206CP39529 758 aa5.1□□□□□ -1.59
SCM3YDL139C VEL1P53058 206 aa5.1□□□□□ -1.59
SCM3YDL139C TAN1P53072 289 aaPredicted RBP5.1□□□□□ -1.59
SCM3YDL139C USE1P53146 245 aa5.1□□□□□ -1.59
SCM3YDL139C CSN9Q03981 162 aa5.1□□□□□ -1.59
SCM3YDL139C ECM38Q05902 660 aaPredicted RBP5.1□□□□□ -1.59
SCM3YDL139C SWM1Q12379 170 aa5.1□□□□□ -1.59
SCM3YDL139C NOT5Q12514 560 aaPredicted RBP5.1□□□□□ -1.59
SCM3YDL139C RPS21BQ3E754 87 aaKnown RBP5.1□□□□□ -1.59
SCM3YDL139C RPS21AP0C0V8 87 aaKnown RBP5.09□□□□□ -1.59
SCM3YDL139C SEC63P14906 663 aa5.09□□□□□ -1.59
SCM3YDL139C PGS1P25578 521 aa5.09□□□□□ -1.59
SCM3YDL139C URA10P30402 227 aa5.09□□□□□ -1.59
SCM3YDL139C PTC1P35182 281 aa5.09□□□□□ -1.59
SCM3YDL139C KES1P35844 434 aaKnown RBP5.09□□□□□ -1.59
SCM3YDL139C SSZ1P38788 538 aaKnown RBP5.09□□□□□ -1.59
SCM3YDL139C LIN1P38852 340 aaPredicted RBP5.09□□□□□ -1.59
SCM3YDL139C ELO3P40319 345 aa5.09□□□□□ -1.59
SCM3YDL139C HOS4P40480 1083 aa5.09□□□□□ -1.59
SCM3YDL139C PTR3P43606 678 aa5.09□□□□□ -1.59
SCM3YDL139C DUG1P43616 481 aaKnown RBP5.09□□□□□ -1.59
SCM3YDL139C PEX31P53203 462 aa5.09□□□□□ -1.59
SCM3YDL139C PEX8P53248 589 aa5.09□□□□□ -1.59
SCM3YDL139C NUP100Q02629 959 aa5.09□□□□□ -1.59
SCM3YDL139C INP2Q03824 705 aa5.09□□□□□ -1.59
SCM3YDL139C TRM12Q04235 462 aa5.09□□□□□ -1.59
SCM3YDL139C CRN1Q06440 651 aa5.09□□□□□ -1.59
SCM3YDL139C MRI1Q06489 411 aaKnown RBP5.09□□□□□ -1.59
SCM3YDL139C AAD4Q07747 329 aa5.09□□□□□ -1.59
SCM3YDL139C PEX15Q08215 383 aa5.09□□□□□ -1.59
SCM3YDL139C DIA2Q08496 732 aaPredicted RBP5.09□□□□□ -1.59
SCM3YDL139C NDD1Q08887 554 aa5.09□□□□□ -1.59
SCM3YDL139C CHS5Q12114 671 aaKnown RBP5.09□□□□□ -1.59
SCM3YDL139C EFG1Q3E705 233 aaKnown RBP5.09□□□□□ -1.59
SCM3YDL139C QCR6P00127 147 aa5.08□□□□□ -1.6
SCM3YDL139C HEM1P09950 548 aaPredicted RBP5.08□□□□□ -1.6
SCM3YDL139C MAS1P10507 462 aa5.08□□□□□ -1.6
SCM3YDL139C KAR9P32526 644 aa5.08□□□□□ -1.6
SCM3YDL139C SMI1P32566 505 aa5.08□□□□□ -1.6
SCM3YDL139C RAD5P32849 1169 aaPredicted RBP5.08□□□□□ -1.6
SCM3YDL139C BEM3P32873 1128 aa5.08□□□□□ -1.6
SCM3YDL139C LOS1P33418 1100 aaPredicted RBP5.08□□□□□ -1.6
SCM3YDL139C HEK2P38199 381 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SCM3YDL139C STB5P38699 743 aa5.08□□□□□ -1.6
SCM3YDL139C PRM9P39551 298 aa5.08□□□□□ -1.6
SCM3YDL139C GPP2P40106 250 aaKnown RBP5.08□□□□□ -1.6
SCM3YDL139C PAN6P40459 309 aa5.08□□□□□ -1.6
SCM3YDL139C AXL1P40851 1208 aa5.08□□□□□ -1.6
SCM3YDL139C STB2P46679 850 aa5.08□□□□□ -1.6
SCM3YDL139C NIT2P47016 307 aa5.08□□□□□ -1.6
SCM3YDL139C LIA1P47120 325 aaKnown RBP5.08□□□□□ -1.6
SCM3YDL139C YJR154WP47181 346 aa5.08□□□□□ -1.6
SCM3YDL139C EMC4P53073 190 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms