RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W GSH2Q08220 491 aa6.89□□□□□ -1.31
NUP84YDL116W SAM4Q08985 325 aaKnown RBP6.89□□□□□ -1.31
NUP84YDL116W ARP7Q12406 477 aa6.89□□□□□ -1.31
NUP84YDL116W YBR298C-AQ8TGK4 73 aa6.89□□□□□ -1.31
NUP84YDL116W CSM1P25651 190 aa6.89□□□□□ -1.31
NUP84YDL116W ATP7P30902 174 aa6.89□□□□□ -1.31
NUP84YDL116W RIM1P32445 135 aaKnown RBP6.89□□□□□ -1.31
NUP84YDL116W ISC10P32645 267 aa6.89□□□□□ -1.31
NUP84YDL116W RFS1P38234 210 aaKnown RBP6.89□□□□□ -1.31
NUP84YDL116W EFM1P38732 585 aa6.89□□□□□ -1.31
NUP84YDL116W GOS1P38736 223 aa6.89□□□□□ -1.31
NUP84YDL116W IMA5P40884 581 aa6.89□□□□□ -1.31
NUP84YDL116W TES1P41903 349 aaKnown RBP6.89□□□□□ -1.31
NUP84YDL116W TWF1P53250 332 aa6.89□□□□□ -1.31
NUP84YDL116W MAK3Q03503 176 aa6.89□□□□□ -1.31
NUP84YDL116W ISR1Q06098 443 aaKnown RBP6.89□□□□□ -1.31
NUP84YDL116W BRE4Q07660 1125 aa6.89□□□□□ -1.31
NUP84YDL116W PFK27Q12471 397 aaPredicted RBP6.89□□□□□ -1.31
NUP84YDL116W CDC19P00549 500 aaKnown RBP6.88□□□□□ -1.31
NUP84YDL116W MRP13P12686 339 aa6.88□□□□□ -1.31
NUP84YDL116W ENA1P13587 1091 aa6.88□□□□□ -1.31
NUP84YDL116W YIH1P25637 258 aa6.88□□□□□ -1.31
NUP84YDL116W PAT1P25644 796 aaKnown RBP6.88□□□□□ -1.31
NUP84YDL116W PPZ1P26570 692 aa6.88□□□□□ -1.31
NUP84YDL116W SPF1P39986 1215 aaKnown RBP6.88□□□□□ -1.31
NUP84YDL116W NUP85P46673 744 aa6.88□□□□□ -1.31
NUP84YDL116W ENA2Q01896 1091 aa6.88□□□□□ -1.31
NUP84YDL116W HRD3Q05787 833 aa6.88□□□□□ -1.31
NUP84YDL116W DNL4Q08387 944 aaPredicted RBP6.88□□□□□ -1.31
NUP84YDL116W NUS1Q12063 375 aa6.88□□□□□ -1.31
NUP84YDL116W NSL1Q12143 216 aa6.88□□□□□ -1.31
NUP84YDL116W HER1Q12276 1246 aa6.88□□□□□ -1.31
NUP84YDL116W SNF8Q12483 233 aa6.88□□□□□ -1.31
NUP84YDL116W ENA5Q12691 1091 aa6.88□□□□□ -1.31
NUP84YDL116W HTZ1Q12692 134 aaKnown RBP6.88□□□□□ -1.31
NUP84YDL116W SAS5Q99314 248 aa6.88□□□□□ -1.31
NUP84YDL116W MSF1P08425 469 aa6.88□□□□□ -1.31
NUP84YDL116W PRI2P20457 528 aa6.88□□□□□ -1.31
NUP84YDL116W GAC1P28006 793 aa6.88□□□□□ -1.31
NUP84YDL116W PAH1P32567 862 aa6.88□□□□□ -1.31
NUP84YDL116W CSE2P33308 149 aa6.88□□□□□ -1.31
NUP84YDL116W VPS21P36017 210 aaKnown RBP6.88□□□□□ -1.31
NUP84YDL116W ECM8P38246 354 aa6.88□□□□□ -1.31
NUP84YDL116W SIF2P38262 535 aa6.88□□□□□ -1.31
NUP84YDL116W RGI1P40043 161 aaPredicted RBP6.88□□□□□ -1.31
NUP84YDL116W MEP2P41948 499 aa6.88□□□□□ -1.31
NUP84YDL116W YJL132WP47014 750 aa6.88□□□□□ -1.31
NUP84YDL116W TIM54P47045 478 aa6.88□□□□□ -1.31
NUP84YDL116W PSP1P50896 841 aaKnown RBP6.88□□□□□ -1.31
NUP84YDL116W ALT2P52892 507 aa6.88□□□□□ -1.31
NUP84YDL116W GTR2P53290 341 aa6.88□□□□□ -1.31
NUP84YDL116W ADE12P80210 433 aaKnown RBP6.88□□□□□ -1.31
NUP84YDL116W MRPL13Q02204 264 aa6.88□□□□□ -1.31
NUP84YDL116W BDS1Q08347 646 aa6.88□□□□□ -1.31
NUP84YDL116W RSA1Q08932 381 aa6.88□□□□□ -1.31
NUP84YDL116W YOR022CQ12204 715 aa6.88□□□□□ -1.31
NUP84YDL116W RMD5Q12508 421 aa6.88□□□□□ -1.31
NUP84YDL116W TPK3P05986 398 aa6.87□□□□□ -1.31
NUP84YDL116W TRX2P22803 104 aaKnown RBP6.87□□□□□ -1.31
NUP84YDL116W PUP3P25451 205 aaKnown RBP6.87□□□□□ -1.31
NUP84YDL116W CRM1P30822 1084 aaKnown RBP6.87□□□□□ -1.31
NUP84YDL116W CDC5P32562 705 aa6.87□□□□□ -1.31
NUP84YDL116W BEM3P32873 1128 aa6.87□□□□□ -1.31
NUP84YDL116W SRP101P32916 621 aa6.87□□□□□ -1.31
NUP84YDL116W DOM34P33309 386 aa6.87□□□□□ -1.31
NUP84YDL116W SKT5P34226 696 aa6.87□□□□□ -1.31
NUP84YDL116W MRP21P38175 177 aa6.87□□□□□ -1.31
NUP84YDL116W RBG1P39729 369 aa6.87□□□□□ -1.31
NUP84YDL116W THO1P40040 218 aaKnown RBP6.87□□□□□ -1.31
NUP84YDL116W DOT6P40059 670 aaKnown RBP6.87□□□□□ -1.31
NUP84YDL116W COG3P40094 801 aa6.87□□□□□ -1.31
NUP84YDL116W FAA4P47912 694 aaKnown RBP6.87□□□□□ -1.31
NUP84YDL116W IMA1P53051 589 aa6.87□□□□□ -1.31
NUP84YDL116W TRM112P53738 135 aaPredicted RBP6.87□□□□□ -1.31
NUP84YDL116W IBD2P53892 351 aa6.87□□□□□ -1.31
NUP84YDL116W SLM2P53955 656 aa6.87□□□□□ -1.31
NUP84YDL116W SIW14P53965 281 aa6.87□□□□□ -1.31
NUP84YDL116W ERB1Q04660 807 aaKnown RBP6.87□□□□□ -1.31
NUP84YDL116W PSR1Q07800 427 aa6.87□□□□□ -1.31
NUP84YDL116W CFT2Q12102 859 aaPredicted RBP6.87□□□□□ -1.31
NUP84YDL116W REP1P03871 373 aa6.86□□□□□ -1.31
NUP84YDL116W CYT1P07143 309 aa6.86□□□□□ -1.31
NUP84YDL116W KAR1P11927 433 aa6.86□□□□□ -1.31
NUP84YDL116W CMK2P22517 447 aa6.86□□□□□ -1.31
NUP84YDL116W MAC1P35192 417 aa6.86□□□□□ -1.31
NUP84YDL116W DRE2P36152 348 aa6.86□□□□□ -1.31
NUP84YDL116W YHR020WP38708 688 aaKnown RBP6.86□□□□□ -1.31
NUP84YDL116W MUP3P38734 546 aa6.86□□□□□ -1.31
NUP84YDL116W MPT5P39016 859 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
NUP84YDL116W BOL2P53082 120 aa6.86□□□□□ -1.31
NUP84YDL116W EFM5P53200 248 aaKnown RBP6.86□□□□□ -1.31
NUP84YDL116W NGL2Q03264 515 aaKnown RBP6.86□□□□□ -1.31
NUP84YDL116W PUS7Q08647 676 aaKnown RBP6.86□□□□□ -1.31
NUP84YDL116W GPB1Q08886 897 aa6.86□□□□□ -1.31
NUP84YDL116W RCN2Q12044 265 aa6.86□□□□□ -1.31
NUP84YDL116W SPE3Q12074 293 aaKnown RBP6.86□□□□□ -1.31
NUP84YDL116W GLE1Q12315 538 aa6.86□□□□□ -1.31
NUP84YDL116W JLP1Q12358 412 aa6.86□□□□□ -1.31
NUP84YDL116W RAD7P06779 565 aa6.86□□□□□ -1.31
NUP84YDL116W NFT1P0CE68 1218 aa6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms