RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C HSP30P25619 332 aa5.7□□□□□ -1.5
MDH3YDL078C BUD23P25627 275 aaPredicted RBP5.7□□□□□ -1.5
MDH3YDL078C CIN8P27895 1000 aa5.7□□□□□ -1.5
MDH3YDL078C SMI1P32566 505 aa5.7□□□□□ -1.5
MDH3YDL078C PHO11P35842 467 aa5.7□□□□□ -1.5
MDH3YDL078C IML3P38265 245 aa5.7□□□□□ -1.5
MDH3YDL078C PHO12P38693 467 aa5.7□□□□□ -1.5
MDH3YDL078C BOL3P39724 118 aa5.7□□□□□ -1.5
MDH3YDL078C YPS6P40583 537 aa5.7□□□□□ -1.5
MDH3YDL078C GCD10P41814 478 aa5.7□□□□□ -1.5
MDH3YDL078C NMD5P46970 1048 aa5.7□□□□□ -1.5
MDH3YDL078C YGL108CP53139 140 aa5.7□□□□□ -1.5
MDH3YDL078C EFM5P53200 248 aaKnown RBP5.7□□□□□ -1.5
MDH3YDL078C FYV6P53913 173 aa5.7□□□□□ -1.5
MDH3YDL078C GTR1Q00582 310 aa5.7□□□□□ -1.5
MDH3YDL078C TRS31Q03337 283 aa5.7□□□□□ -1.5
MDH3YDL078C ARG7Q04728 441 aa5.7□□□□□ -1.5
MDH3YDL078C DYN3Q04949 312 aa5.7□□□□□ -1.5
MDH3YDL078C YLR177WQ06251 628 aa5.7□□□□□ -1.5
MDH3YDL078C MDM36Q06820 579 aa5.7□□□□□ -1.5
MDH3YDL078C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
MDH3YDL078C YIL002W-AQ3E7Z5 69 aa5.7□□□□□ -1.5
MDH3YDL078C YLR149CQ99296 730 aa5.7□□□□□ -1.5
MDH3YDL078C TEL1P38110 2787 aa5.69□□□□□ -1.5
MDH3YDL078C SEM1O94742 89 aa5.69□□□□□ -1.5
MDH3YDL078C TEF1P02994 458 aaKnown RBP5.69□□□□□ -1.5
MDH3YDL078C MSS116P15424 664 aaKnown RBP5.69□□□□□ -1.5
MDH3YDL078C MER1P16523 270 aa5.69□□□□□ -1.5
MDH3YDL078C SNF5P18480 905 aa5.69□□□□□ -1.5
MDH3YDL078C YCL068CP25593 260 aa5.69□□□□□ -1.5
MDH3YDL078C POL4P25615 582 aa5.69□□□□□ -1.5
MDH3YDL078C VMA8P32610 256 aaKnown RBP5.69□□□□□ -1.5
MDH3YDL078C MRE11P32829 692 aa5.69□□□□□ -1.5
MDH3YDL078C ATO2P32907 282 aa5.69□□□□□ -1.5
MDH3YDL078C RSM22P36056 628 aa5.69□□□□□ -1.5
MDH3YDL078C STB6P36085 766 aa5.69□□□□□ -1.5
MDH3YDL078C MRP21P38175 177 aa5.69□□□□□ -1.5
MDH3YDL078C LDB7P38210 180 aa5.69□□□□□ -1.5
MDH3YDL078C YHL012WP38709 493 aa5.69□□□□□ -1.5
MDH3YDL078C YHR218WP38899 603 aa5.69□□□□□ -1.5
MDH3YDL078C ALG8P40351 577 aa5.69□□□□□ -1.5
MDH3YDL078C YIL108WP40483 696 aaKnown RBP5.69□□□□□ -1.5
MDH3YDL078C IRR1P40541 1150 aa5.69□□□□□ -1.5
MDH3YDL078C HAM1P47119 197 aaKnown RBP5.69□□□□□ -1.5
MDH3YDL078C ERP6P53198 216 aa5.69□□□□□ -1.5
MDH3YDL078C YNL058CP53947 316 aa5.69□□□□□ -1.5
MDH3YDL078C CCE1Q03702 353 aa5.69□□□□□ -1.5
MDH3YDL078C FIN1Q03898 291 aa5.69□□□□□ -1.5
MDH3YDL078C RPN9Q04062 393 aaKnown RBP5.69□□□□□ -1.5
MDH3YDL078C YDR109CQ04585 715 aa5.69□□□□□ -1.5
MDH3YDL078C RSC3Q06639 885 aa5.69□□□□□ -1.5
MDH3YDL078C NOP6Q07623 225 aaKnown RBP5.69□□□□□ -1.5
MDH3YDL078C THI73Q07904 523 aa5.69□□□□□ -1.5
MDH3YDL078C ACM1Q08981 209 aa5.69□□□□□ -1.5
MDH3YDL078C VPS68Q12016 184 aa5.69□□□□□ -1.5
MDH3YDL078C TAF3Q12297 353 aa5.69□□□□□ -1.5
MDH3YDL078C FUR4P05316 633 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C CYT1P07143 309 aa5.68□□□□□ -1.5
MDH3YDL078C CPA1P07258 411 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C KAR1P11927 433 aa5.68□□□□□ -1.5
MDH3YDL078C INO1P11986 533 aa5.68□□□□□ -1.5
MDH3YDL078C GCN3P14741 305 aa5.68□□□□□ -1.5
MDH3YDL078C CBF1P17106 351 aa5.68□□□□□ -1.5
MDH3YDL078C PRP9P19736 530 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C RFA2P26754 273 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C URA7P28274 579 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C URA10P30402 227 aa5.68□□□□□ -1.5
MDH3YDL078C MKS1P34072 584 aa5.68□□□□□ -1.5
MDH3YDL078C UTP11P34247 250 aaPredicted RBP5.68□□□□□ -1.5
MDH3YDL078C APD1P38281 316 aa5.68□□□□□ -1.5
MDH3YDL078C STP2P38704 541 aa5.68□□□□□ -1.5
MDH3YDL078C DBP8P38719 431 aa5.68□□□□□ -1.5
MDH3YDL078C GND1P38720 489 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C CYC2P38909 366 aa5.68□□□□□ -1.5
MDH3YDL078C ACO2P39533 789 aa5.68□□□□□ -1.5
MDH3YDL078C SEO1P39709 593 aa5.68□□□□□ -1.5
MDH3YDL078C ERV46P39727 415 aa5.68□□□□□ -1.5
MDH3YDL078C IME4P41833 600 aa5.68□□□□□ -1.5
MDH3YDL078C FET5P43561 622 aa5.68□□□□□ -1.5
MDH3YDL078C MIC19P43594 170 aa5.68□□□□□ -1.5
MDH3YDL078C SAE2P46946 345 aa5.68□□□□□ -1.5
MDH3YDL078C NOP9P47077 666 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C PEX8P53248 589 aa5.68□□□□□ -1.5
MDH3YDL078C SUN4P53616 420 aa5.68□□□□□ -1.5
MDH3YDL078C FRE4P53746 719 aa5.68□□□□□ -1.5
MDH3YDL078C PET117Q02771 107 aa5.68□□□□□ -1.5
MDH3YDL078C ISU1Q03020 165 aa5.68□□□□□ -1.5
MDH3YDL078C NHX1Q04121 633 aa5.68□□□□□ -1.5
MDH3YDL078C EMI1Q04406 187 aa5.68□□□□□ -1.5
MDH3YDL078C NUT2Q06213 157 aa5.68□□□□□ -1.5
MDH3YDL078C SEC10Q06245 871 aa5.68□□□□□ -1.5
MDH3YDL078C MCM21Q06675 368 aa5.68□□□□□ -1.5
MDH3YDL078C GPN2Q08726 347 aaPredicted RBP5.68□□□□□ -1.5
MDH3YDL078C HRK1Q08732 759 aaKnown RBP5.68□□□□□ -1.5
MDH3YDL078C NUR1Q12066 484 aa5.68□□□□□ -1.5
MDH3YDL078C SMF3Q12078 473 aaPredicted RBP5.68□□□□□ -1.5
MDH3YDL078C CMD1P06787 147 aaKnown RBP5.67□□□□□ -1.5
MDH3YDL078C SWI5P08153 709 aa5.67□□□□□ -1.5
MDH3YDL078C RPB2P08518 1224 aaKnown RBP5.67□□□□□ -1.5
MDH3YDL078C TUB1P09733 447 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms