RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W RNY1Q02933 434 aaKnown RBP5.58□□□□□ -1.52
SHM1YBR263W GRX3Q03835 250 aa5.58□□□□□ -1.52
SHM1YBR263W TGL5Q12043 749 aa5.58□□□□□ -1.52
SHM1YBR263W NUS1Q12063 375 aa5.58□□□□□ -1.52
SHM1YBR263W KCS1Q12494 1050 aa5.58□□□□□ -1.52
SHM1YBR263W RFA2P26754 273 aaKnown RBP5.58□□□□□ -1.52
SHM1YBR263W PRP18P33411 251 aaPredicted RBP5.58□□□□□ -1.52
SHM1YBR263W SRX1P36077 127 aa5.58□□□□□ -1.52
SHM1YBR263W STB6P36085 766 aa5.58□□□□□ -1.52
SHM1YBR263W IML3P38265 245 aa5.58□□□□□ -1.52
SHM1YBR263W YHL012WP38709 493 aa5.58□□□□□ -1.52
SHM1YBR263W DBP8P38719 431 aa5.58□□□□□ -1.52
SHM1YBR263W PCL5P38794 229 aa5.58□□□□□ -1.52
SHM1YBR263W REV7P38927 245 aa5.58□□□□□ -1.52
SHM1YBR263W PEP8P40335 379 aa5.58□□□□□ -1.52
SHM1YBR263W HOS4P40480 1083 aa5.58□□□□□ -1.52
SHM1YBR263W SPP2Q02521 185 aa5.58□□□□□ -1.52
SHM1YBR263W YMR209CQ03648 457 aa5.58□□□□□ -1.52
SHM1YBR263W YLR177WQ06251 628 aa5.58□□□□□ -1.52
SHM1YBR263W HDA2Q06629 674 aa5.58□□□□□ -1.52
SHM1YBR263W BUD7Q08754 746 aa5.58□□□□□ -1.52
SHM1YBR263W YLR053CQ12026 108 aa5.58□□□□□ -1.52
SHM1YBR263W MRH1Q12117 320 aaPredicted RBP5.58□□□□□ -1.52
SHM1YBR263W UPC2Q12151 913 aa5.58□□□□□ -1.52
SHM1YBR263W RGS2Q99188 309 aa5.58□□□□□ -1.52
SHM1YBR263W SUC2P00724 532 aa5.57□□□□□ -1.52
SHM1YBR263W YKR104WP0CE69 306 aa5.57□□□□□ -1.52
SHM1YBR263W GCY1P14065 312 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SHM1YBR263W SRV2P17555 526 aaKnown RBP5.57□□□□□ -1.52
SHM1YBR263W AMD2P22580 549 aa5.57□□□□□ -1.52
SHM1YBR263W YCR051WP25631 222 aa5.57□□□□□ -1.52
SHM1YBR263W CIN8P27895 1000 aa5.57□□□□□ -1.52
SHM1YBR263W SFP1P32432 683 aa5.57□□□□□ -1.52
SHM1YBR263W MF(ALPHA)2P32435 120 aa5.57□□□□□ -1.52
SHM1YBR263W TFC3P34111 1160 aa5.57□□□□□ -1.52
SHM1YBR263W SLD2P34252 453 aa5.57□□□□□ -1.52
SHM1YBR263W YKL151CP36059 337 aa5.57□□□□□ -1.52
SHM1YBR263W YHR182WP38870 785 aa5.57□□□□□ -1.52
SHM1YBR263W PFS1P38872 237 aa5.57□□□□□ -1.52
SHM1YBR263W PCF11P39081 626 aaPredicted RBP5.57□□□□□ -1.52
SHM1YBR263W HAT2P39984 401 aa5.57□□□□□ -1.52
SHM1YBR263W TIF34P40217 347 aaKnown RBP5.57□□□□□ -1.52
SHM1YBR263W SEC28P40509 296 aaKnown RBP5.57□□□□□ -1.52
SHM1YBR263W OSH6Q02201 448 aa5.57□□□□□ -1.52
SHM1YBR263W RNT1Q02555 471 aa5.57□□□□□ -1.52
SHM1YBR263W YPL113CQ02961 396 aa5.57□□□□□ -1.52
SHM1YBR263W MFB1Q04922 465 aa5.57□□□□□ -1.52
SHM1YBR263W FAR8Q05040 523 aa5.57□□□□□ -1.52
SHM1YBR263W RUD3Q12234 484 aaKnown RBP5.57□□□□□ -1.52
SHM1YBR263W NCA2Q12374 616 aa5.57□□□□□ -1.52
SHM1YBR263W IRA2P19158 3079 aa5.57□□□□□ -1.52
SHM1YBR263W INH1P01097 85 aa5.56□□□□□ -1.52
SHM1YBR263W SEC53P07283 254 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W TUB1P09733 447 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W SPT15P13393 240 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W ABF1P14164 731 aa5.56□□□□□ -1.52
SHM1YBR263W TRX2P22803 104 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W RRP14P36080 434 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W GMH1P36125 273 aa5.56□□□□□ -1.52
SHM1YBR263W YBR032WP38223 100 aa5.56□□□□□ -1.52
SHM1YBR263W CYC2P38909 366 aa5.56□□□□□ -1.52
SHM1YBR263W YJL206CP39529 758 aa5.56□□□□□ -1.52
SHM1YBR263W OAF1P39720 1047 aaPredicted RBP5.56□□□□□ -1.52
SHM1YBR263W YJL070CP40361 888 aa5.56□□□□□ -1.52
SHM1YBR263W PFK26P40433 827 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W PET130P47065 347 aa5.56□□□□□ -1.52
SHM1YBR263W LIA1P47120 325 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W MNN10P50108 393 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W BOL2P53082 120 aa5.56□□□□□ -1.52
SHM1YBR263W CSN9Q03981 162 aa5.56□□□□□ -1.52
SHM1YBR263W ARG7Q04728 441 aa5.56□□□□□ -1.52
SHM1YBR263W RSA3Q05942 220 aaKnown RBP5.56□□□□□ -1.52
SHM1YBR263W BLS1Q06071 122 aa5.56□□□□□ -1.52
SHM1YBR263W VHS3Q08438 674 aa5.56□□□□□ -1.52
SHM1YBR263W ICT1Q12385 394 aa5.56□□□□□ -1.52
SHM1YBR263W PHO5P00635 467 aa5.55□□□□□ -1.52
SHM1YBR263W CPA1P07258 411 aaKnown RBP5.55□□□□□ -1.52
SHM1YBR263W HSC82P15108 705 aaKnown RBP5.55□□□□□ -1.52
SHM1YBR263W PHO84P25297 587 aaKnown RBP5.55□□□□□ -1.52
SHM1YBR263W SNT1P25357 1226 aa5.55□□□□□ -1.52
SHM1YBR263W AAD3P25612 363 aa5.55□□□□□ -1.52
SHM1YBR263W MUP3P38734 546 aa5.55□□□□□ -1.52
SHM1YBR263W GAT1P43574 510 aa5.55□□□□□ -1.52
SHM1YBR263W YGL108CP53139 140 aa5.55□□□□□ -1.52
SHM1YBR263W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SHM1YBR263W TAF11Q04226 346 aa5.55□□□□□ -1.52
SHM1YBR263W TRM12Q04235 462 aa5.55□□□□□ -1.52
SHM1YBR263W EMI1Q04406 187 aa5.55□□□□□ -1.52
SHM1YBR263W VTA1Q06263 330 aa5.55□□□□□ -1.52
SHM1YBR263W CRN1Q06440 651 aa5.55□□□□□ -1.52
SHM1YBR263W TRM8Q12009 286 aa5.55□□□□□ -1.52
SHM1YBR263W VPS68Q12016 184 aa5.55□□□□□ -1.52
SHM1YBR263W CHS5Q12114 671 aaKnown RBP5.55□□□□□ -1.52
SHM1YBR263W UBX3Q12229 455 aa5.55□□□□□ -1.52
SHM1YBR263W YOR012WQ12351 137 aa5.55□□□□□ -1.52
SHM1YBR263W SOD2P00447 233 aa5.54□□□□□ -1.52
SHM1YBR263W CAN1P04817 590 aa5.54□□□□□ -1.52
SHM1YBR263W POL30P15873 258 aaKnown RBP5.54□□□□□ -1.52
SHM1YBR263W VPS34P22543 875 aa5.54□□□□□ -1.52
SHM1YBR263W YSR3P23501 404 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms