RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C RPS10AQ08745 105 aaPredicted RBP4.39□□□□□ -1.71
NPL4YBR170C REX3Q12090 404 aa4.39□□□□□ -1.71
NPL4YBR170C HIP1P06775 603 aa4.38□□□□□ -1.71
NPL4YBR170C RPL31BP0C2H9 113 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C BUD5P25300 642 aaPredicted RBP4.38□□□□□ -1.71
NPL4YBR170C PIM1P36775 1133 aa4.38□□□□□ -1.71
NPL4YBR170C RPL32P38061 130 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C SIF2P38262 535 aa4.38□□□□□ -1.71
NPL4YBR170C FTH1P38310 465 aa4.38□□□□□ -1.71
NPL4YBR170C IMD2P38697 523 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C MUP3P38734 546 aa4.38□□□□□ -1.71
NPL4YBR170C FMS1P50264 508 aa4.38□□□□□ -1.71
NPL4YBR170C EMI2Q04409 500 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C YLR455WQ06188 304 aa4.38□□□□□ -1.71
NPL4YBR170C SIL1Q08199 421 aa4.38□□□□□ -1.71
NPL4YBR170C RAP1P11938 827 aa4.38□□□□□ -1.71
NPL4YBR170C TKL1P23254 680 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C YIM1P28625 365 aa4.38□□□□□ -1.71
NPL4YBR170C MSP1P28737 362 aa4.38□□□□□ -1.71
NPL4YBR170C SMI1P32566 505 aa4.38□□□□□ -1.71
NPL4YBR170C DAD2P36162 133 aa4.38□□□□□ -1.71
NPL4YBR170C DBP8P38719 431 aa4.38□□□□□ -1.71
NPL4YBR170C GND1P38720 489 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C RRF1P38771 230 aa4.38□□□□□ -1.71
NPL4YBR170C ANS1P38832 159 aa4.38□□□□□ -1.71
NPL4YBR170C CIN4P39110 191 aa4.38□□□□□ -1.71
NPL4YBR170C SER3P40054 469 aa4.38□□□□□ -1.71
NPL4YBR170C ATF1P40353 525 aa4.38□□□□□ -1.71
NPL4YBR170C RPS10BP46784 105 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C YGR149WP48236 432 aa4.38□□□□□ -1.71
NPL4YBR170C STB4P50104 949 aa4.38□□□□□ -1.71
NPL4YBR170C YGL138CP53122 345 aa4.38□□□□□ -1.71
NPL4YBR170C SKO1Q02100 647 aa4.38□□□□□ -1.71
NPL4YBR170C PFA5Q03289 374 aa4.38□□□□□ -1.71
NPL4YBR170C ACL4Q03771 387 aa4.38□□□□□ -1.71
NPL4YBR170C RRP45Q05636 305 aaKnown RBP4.38□□□□□ -1.71
NPL4YBR170C VPS54Q12071 889 aa4.38□□□□□ -1.71
NPL4YBR170C LPD1P09624 499 aaKnown RBP4.37□□□□□ -1.71
NPL4YBR170C YML002WP0CF17 737 aa4.37□□□□□ -1.71
NPL4YBR170C KIN3P22209 435 aa4.37□□□□□ -1.71
NPL4YBR170C MAK32P23060 363 aa4.37□□□□□ -1.71
NPL4YBR170C SPB1P25582 841 aaPredicted RBP4.37□□□□□ -1.71
NPL4YBR170C NTC20P38302 140 aaPredicted RBP4.37□□□□□ -1.71
NPL4YBR170C SDS3P40505 327 aa4.37□□□□□ -1.71
NPL4YBR170C NAS2P40555 220 aa4.37□□□□□ -1.71
NPL4YBR170C FET5P43561 622 aa4.37□□□□□ -1.71
NPL4YBR170C AIM22P47051 409 aa4.37□□□□□ -1.71
NPL4YBR170C URB2P47108 1174 aa4.37□□□□□ -1.71
NPL4YBR170C COS5P47187 383 aa4.37□□□□□ -1.71
NPL4YBR170C YTP1P53584 459 aa4.37□□□□□ -1.71
NPL4YBR170C YNL058CP53947 316 aa4.37□□□□□ -1.71
NPL4YBR170C YLR456WQ06199 204 aa4.37□□□□□ -1.71
NPL4YBR170C COS7Q07788 383 aa4.37□□□□□ -1.71
NPL4YBR170C CFT2Q12102 859 aaPredicted RBP4.37□□□□□ -1.71
NPL4YBR170C HSP42Q12329 375 aa4.37□□□□□ -1.71
NPL4YBR170C SAC1P32368 623 aaKnown RBP4.36□□□□□ -1.71
NPL4YBR170C GYP6P32806 458 aa4.36□□□□□ -1.71
NPL4YBR170C ADH5P38113 351 aaKnown RBP4.36□□□□□ -1.71
NPL4YBR170C ERV46P39727 415 aa4.36□□□□□ -1.71
NPL4YBR170C OCA1P50946 238 aaPredicted RBP4.36□□□□□ -1.71
NPL4YBR170C YNL144CP53907 740 aa4.36□□□□□ -1.71
NPL4YBR170C RSM23Q01163 450 aa4.36□□□□□ -1.71
NPL4YBR170C TOF2Q02208 771 aa4.36□□□□□ -1.71
NPL4YBR170C ECM30Q06673 1274 aa4.36□□□□□ -1.71
NPL4YBR170C CDC45Q08032 650 aa4.36□□□□□ -1.71
NPL4YBR170C SLK19Q08581 821 aaKnown RBP4.36□□□□□ -1.71
NPL4YBR170C YER145C-AA0A023PYF4 145 aa4.35□□□□□ -1.71
NPL4YBR170C HEM1P09950 548 aaPredicted RBP4.35□□□□□ -1.71
NPL4YBR170C AQY1P0CD91 305 aa4.35□□□□□ -1.71
NPL4YBR170C GLK1P17709 500 aaKnown RBP4.35□□□□□ -1.71
NPL4YBR170C PRP2P20095 876 aaPredicted RBP4.35□□□□□ -1.71
NPL4YBR170C GAC1P28006 793 aa4.35□□□□□ -1.71
NPL4YBR170C YSW1P38280 609 aa4.35□□□□□ -1.71
NPL4YBR170C ARP1P38696 384 aa4.35□□□□□ -1.71
NPL4YBR170C ECM27P47144 725 aa4.35□□□□□ -1.71
NPL4YBR170C MLC1P53141 149 aa4.35□□□□□ -1.71
NPL4YBR170C RPT4P53549 437 aaKnown RBP4.35□□□□□ -1.71
NPL4YBR170C YOR389WQ08912 624 aa4.35□□□□□ -1.71
NPL4YBR170C YLR049CQ12110 428 aa4.35□□□□□ -1.71
NPL4YBR170C MRH1Q12117 320 aaPredicted RBP4.35□□□□□ -1.71
NPL4YBR170C PSY3Q12318 242 aa4.35□□□□□ -1.71
NPL4YBR170C ARG81P05085 880 aa4.35□□□□□ -1.71
NPL4YBR170C PUT2P07275 575 aa4.35□□□□□ -1.71
NPL4YBR170C GPA1P08539 472 aa4.35□□□□□ -1.71
NPL4YBR170C SPO7P18410 259 aa4.35□□□□□ -1.71
NPL4YBR170C DAP2P18962 818 aa4.35□□□□□ -1.71
NPL4YBR170C URA4P20051 364 aa4.35□□□□□ -1.71
NPL4YBR170C CLB2P24869 491 aa4.35□□□□□ -1.71
NPL4YBR170C PHO84P25297 587 aaKnown RBP4.35□□□□□ -1.71
NPL4YBR170C SAT4P25333 603 aaKnown RBP4.35□□□□□ -1.71
NPL4YBR170C DMC1P25453 334 aa4.35□□□□□ -1.71
NPL4YBR170C RAD14P28519 371 aa4.35□□□□□ -1.71
NPL4YBR170C YMC1P32331 307 aa4.35□□□□□ -1.71
NPL4YBR170C EMP70P32802 667 aa4.35□□□□□ -1.71
NPL4YBR170C RPC34P32910 317 aa4.35□□□□□ -1.71
NPL4YBR170C MTR2P34232 184 aaKnown RBP4.35□□□□□ -1.71
NPL4YBR170C MIA40P36046 403 aa4.35□□□□□ -1.71
NPL4YBR170C ATG27P46989 271 aa4.35□□□□□ -1.71
NPL4YBR170C YJL132WP47014 750 aa4.35□□□□□ -1.71
NPL4YBR170C IMD3P50095 523 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms