RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W YHR020WP38708 688 aaKnown RBP5.7□□□□□ -1.5
SHP1YBL058W HSE1P38753 452 aa5.7□□□□□ -1.5
SHP1YBL058W BEM4P39011 633 aa5.7□□□□□ -1.5
SHP1YBL058W DHH1P39517 506 aaKnown RBP5.7□□□□□ -1.5
SHP1YBL058W GAT1P43574 510 aa5.7□□□□□ -1.5
SHP1YBL058W YJL049WP47048 450 aa5.7□□□□□ -1.5
SHP1YBL058W PET130P47065 347 aa5.7□□□□□ -1.5
SHP1YBL058W NNF2P53253 936 aa5.7□□□□□ -1.5
SHP1YBL058W FHN1P53279 174 aa5.7□□□□□ -1.5
SHP1YBL058W PRO2P54885 456 aaKnown RBP5.7□□□□□ -1.5
SHP1YBL058W TFB2Q02939 513 aa5.7□□□□□ -1.5
SHP1YBL058W MTG1Q03151 367 aaPredicted RBP5.7□□□□□ -1.5
SHP1YBL058W IRC13Q08630 104 aa5.7□□□□□ -1.5
SHP1YBL058W AIM41Q12032 185 aa5.7□□□□□ -1.5
SHP1YBL058W MCD1Q12158 566 aa5.7□□□□□ -1.5
SHP1YBL058W YLR111WQ12528 110 aa5.7□□□□□ -1.5
SHP1YBL058W PRP16P15938 1071 aaPredicted RBP5.69□□□□□ -1.5
SHP1YBL058W CKI1P20485 582 aa5.69□□□□□ -1.5
SHP1YBL058W MGT1P26188 188 aa5.69□□□□□ -1.5
SHP1YBL058W CDC20P26309 610 aa5.69□□□□□ -1.5
SHP1YBL058W BUB3P26449 341 aa5.69□□□□□ -1.5
SHP1YBL058W MF(ALPHA)2P32435 120 aa5.69□□□□□ -1.5
SHP1YBL058W GCD6P32501 712 aaKnown RBP5.69□□□□□ -1.5
SHP1YBL058W SFC1P33303 322 aa5.69□□□□□ -1.5
SHP1YBL058W SKT5P34226 696 aa5.69□□□□□ -1.5
SHP1YBL058W YRO2P38079 344 aa5.69□□□□□ -1.5
SHP1YBL058W MGS1P40151 587 aa5.69□□□□□ -1.5
SHP1YBL058W YIL086CP40503 102 aa5.69□□□□□ -1.5
SHP1YBL058W YJR030CP47101 745 aa5.69□□□□□ -1.5
SHP1YBL058W COS12P53053 380 aa5.69□□□□□ -1.5
SHP1YBL058W ERG26P53199 349 aaKnown RBP5.69□□□□□ -1.5
SHP1YBL058W YGR250CP53316 781 aaKnown RBP5.69□□□□□ -1.5
SHP1YBL058W ADE12P80210 433 aaKnown RBP5.69□□□□□ -1.5
SHP1YBL058W CTR9P89105 1077 aa5.69□□□□□ -1.5
SHP1YBL058W GAD1Q04792 585 aa5.69□□□□□ -1.5
SHP1YBL058W UTP20P35194 2493 aaKnown RBP5.69□□□□□ -1.5
SHP1YBL058W YAR066WP0CX18 203 aa5.68□□□□□ -1.5
SHP1YBL058W YHR214WP0CX19 203 aa5.68□□□□□ -1.5
SHP1YBL058W CMP2P14747 604 aa5.68□□□□□ -1.5
SHP1YBL058W TYR1P20049 452 aa5.68□□□□□ -1.5
SHP1YBL058W HRR25P29295 494 aaKnown RBP5.68□□□□□ -1.5
SHP1YBL058W SRB4P32569 687 aa5.68□□□□□ -1.5
SHP1YBL058W LST4P34239 828 aa5.68□□□□□ -1.5
SHP1YBL058W RRP1P35178 278 aaPredicted RBP5.68□□□□□ -1.5
SHP1YBL058W TOM20P35180 183 aa5.68□□□□□ -1.5
SHP1YBL058W EBP2P36049 427 aaKnown RBP5.68□□□□□ -1.5
SHP1YBL058W POP4P38336 279 aa5.68□□□□□ -1.5
SHP1YBL058W MMS21P38632 267 aa5.68□□□□□ -1.5
SHP1YBL058W GIC1P38785 314 aa5.68□□□□□ -1.5
SHP1YBL058W AAD14P42884 376 aa5.68□□□□□ -1.5
SHP1YBL058W GCV1P48015 400 aa5.68□□□□□ -1.5
SHP1YBL058W RTA1P53047 317 aa5.68□□□□□ -1.5
SHP1YBL058W MTQ2Q03920 221 aaPredicted RBP5.68□□□□□ -1.5
SHP1YBL058W MCA1Q08601 432 aa5.68□□□□□ -1.5
SHP1YBL058W NUS1Q12063 375 aa5.68□□□□□ -1.5
SHP1YBL058W WHI5Q12416 295 aa5.68□□□□□ -1.5
SHP1YBL058W YPT1P01123 206 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W RPS4AP0CX35 261 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W RPS4BP0CX36 261 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W MCM1P11746 286 aa5.67□□□□□ -1.5
SHP1YBL058W CLN2P20438 545 aa5.67□□□□□ -1.5
SHP1YBL058W ATP12P22135 325 aa5.67□□□□□ -1.5
SHP1YBL058W NAR1P23503 491 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W PAP1P29468 568 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W URA10P30402 227 aa5.67□□□□□ -1.5
SHP1YBL058W MLF3P32047 452 aa5.67□□□□□ -1.5
SHP1YBL058W THI80P35202 319 aa5.67□□□□□ -1.5
SHP1YBL058W VHC1P38329 1120 aa5.67□□□□□ -1.5
SHP1YBL058W YHR127WP38833 243 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W MPT5P39016 859 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SHP1YBL058W MEP1P40260 492 aa5.67□□□□□ -1.5
SHP1YBL058W ATG36P46983 293 aa5.67□□□□□ -1.5
SHP1YBL058W MPS2P53159 387 aa5.67□□□□□ -1.5
SHP1YBL058W YGR012WP53206 393 aa5.67□□□□□ -1.5
SHP1YBL058W CWC22P53333 577 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W FMP45Q07651 309 aa5.67□□□□□ -1.5
SHP1YBL058W ACM1Q08981 209 aa5.67□□□□□ -1.5
SHP1YBL058W YDR056CQ12025 205 aa5.67□□□□□ -1.5
SHP1YBL058W YDL176WQ12027 708 aa5.67□□□□□ -1.5
SHP1YBL058W MRH1Q12117 320 aaPredicted RBP5.67□□□□□ -1.5
SHP1YBL058W PST1Q12355 444 aa5.67□□□□□ -1.5
SHP1YBL058W ZRT2Q12436 422 aa5.67□□□□□ -1.5
SHP1YBL058W LSO1Q3E827 93 aa5.67□□□□□ -1.5
SHP1YBL058W PNO1Q99216 274 aaKnown RBP5.67□□□□□ -1.5
SHP1YBL058W STE2D6VTK4 431 aa5.66□□□□□ -1.5
SHP1YBL058W TEF1P02994 458 aaKnown RBP5.66□□□□□ -1.5
SHP1YBL058W CDC9P04819 755 aa5.66□□□□□ -1.5
SHP1YBL058W KIN2P13186 1147 aaKnown RBP5.66□□□□□ -1.5
SHP1YBL058W CDC26P14724 124 aa5.66□□□□□ -1.5
SHP1YBL058W MRPL33P20084 86 aa5.66□□□□□ -1.5
SHP1YBL058W CLB1P24868 471 aa5.66□□□□□ -1.5
SHP1YBL058W PRO1P32264 428 aa5.66□□□□□ -1.5
SHP1YBL058W SRB5P32585 307 aa5.66□□□□□ -1.5
SHP1YBL058W SFA1P32771 386 aa5.66□□□□□ -1.5
SHP1YBL058W SOL2P37262 315 aa5.66□□□□□ -1.5
SHP1YBL058W EHT1P38295 451 aa5.66□□□□□ -1.5
SHP1YBL058W YHI9P38765 294 aa5.66□□□□□ -1.5
SHP1YBL058W SEC24P40482 926 aaKnown RBP5.66□□□□□ -1.5
SHP1YBL058W RPC17P47076 161 aa5.66□□□□□ -1.5
SHP1YBL058W EAF7P53911 425 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms