RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 H0YGN5 161 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 NFIBO00712 420 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 RARBP10826 455 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 AKR1A1P14550 325 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 CDC37Q16543 378 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-231ENST00000641939 ARMCX2Q7L311 632 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 CCDC144CPQ8IYA2 1237 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 IGDCC4Q8TDY8 1250 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 ABHD16BQ9H3Z7 469 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 SENP2Q9HC62 589 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
PHGDH-231ENST00000641939 ASB14A6NK59 587 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 DHX16O60231 1041 aaKnown RBP17.53■□□□□ 0.4
PHGDH-231ENST00000641939 MCM5P33992 734 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 ACVR2BQ13705 512 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 GJC2Q5T442 439 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-231ENST00000641939 RNF20Q5VTR2 975 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 STAG2Q8N3U4 1231 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 CLEC4DQ8WXI8 215 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 MTA3Q9BTC8 594 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 JMJD4Q9H9V9 463 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 XPNPEP3Q9NQH7 507 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 ZHX1Q9UKY1 873 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-231ENST00000641939 FAM184BQ9ULE4 1060 aa17.53■□□□□ 0.4
PHGDH-231ENST00000641939 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 PTPDC1A2A3K4 754 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 PALM3A6NDB9 673 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-231ENST00000641939 KBTBD13C9JR72 458 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 KLRF2D3W0D1 207 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 PRC1O43663 620 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-231ENST00000641939 BAATQ14032 418 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-231ENST00000641939 GRM4Q14833 912 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 LRRC41Q15345 812 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 QRICH1Q2TAL8 776 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 USH1GQ495M9 461 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 CATIPQ7Z7H3 387 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 SENP6Q9GZR1 1112 aaPredicted RBP17.52■□□□□ 0.4
PHGDH-231ENST00000641939 VAT1LQ9HCJ6 419 aa17.52■□□□□ 0.4
PHGDH-231ENST00000641939 ASTN1O14525 1302 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 ABCB11O95342 1321 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 TRIOBPQ9H2D6 2365 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 RANBP2P49792 3224 aaKnown RBP17.51■□□□□ 0.39
PHGDH-231ENST00000641939 TROAPQ12815 778 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 RNF207Q6ZRF8 634 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 FBXO11Q86XK2 927 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 KATNBL1Q9H079 304 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
PHGDH-231ENST00000641939 ADD3Q9UEY8 706 aaKnown RBP17.51■□□□□ 0.39
PHGDH-231ENST00000641939 PGK1P00558 417 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 CALML3P27482 149 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 RNF180Q86T96 592 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 C7orf61Q8IZ16 206 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 LENG1Q96BZ8 264 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-231ENST00000641939 TMEM87BQ96K49 555 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 MAF1Q9H063 256 aa17.5■□□□□ 0.39
PHGDH-231ENST00000641939 GPHNQ9NQX3 736 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-231ENST00000641939 LOC102724159A0A0B4J2E5 919 aa17.49■□□□□ 0.39
PHGDH-231ENST00000641939 SH2B2O14492 632 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-231ENST00000641939 DUSP11O75319 330 aaKnown RBP17.49■□□□□ 0.39
PHGDH-231ENST00000641939 RPS6P62753 249 aaKnown RBP17.49■□□□□ 0.39
PHGDH-231ENST00000641939 COL9A3Q14050 684 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-231ENST00000641939 PWP2Q15269 919 aaKnown RBP17.49■□□□□ 0.39
PHGDH-231ENST00000641939 LRRC26Q2I0M4 334 aa17.49■□□□□ 0.39
PHGDH-231ENST00000641939 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
PHGDH-231ENST00000641939 TMTC2Q8N394 836 aa17.49■□□□□ 0.39
PHGDH-231ENST00000641939 MORC4Q8TE76 937 aa17.49■□□□□ 0.39
PHGDH-231ENST00000641939 MTMR8Q96EF0 704 aa17.49■□□□□ 0.39
PHGDH-231ENST00000641939 PURBQ96QR8 312 aaKnown RBP17.49■□□□□ 0.39
PHGDH-231ENST00000641939 MAP3K14Q99558 947 aa17.49■□□□□ 0.39
PHGDH-231ENST00000641939 MRPL11Q9Y3B7 192 aaKnown RBP17.49■□□□□ 0.39
PHGDH-231ENST00000641939 SYNRGQ9UMZ2 1314 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 ZBTB5O15062 677 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 ADAMTS4O75173 837 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 DDAH1O94760 285 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 LIFRP42702 1097 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 ALDH5A1P51649 535 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-231ENST00000641939 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 AMNQ9BXJ7 453 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
PHGDH-231ENST00000641939 DDX49Q9Y6V7 483 aaKnown RBP17.48■□□□□ 0.39
PHGDH-231ENST00000641939 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 ADCY6O43306 1168 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 ADCYAP1R1P41586 468 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-231ENST00000641939 MCF2L2Q86YR7 1114 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 DNERQ8NFT8 737 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-231ENST00000641939 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 MYL10Q9BUA6 226 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 VTA1Q9NP79 307 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 PHF24Q9UPV7 400 aa17.47■□□□□ 0.39
PHGDH-231ENST00000641939 KIF5BP33176 963 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 TNFAIP2Q03169 654 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms