RNA–Protein interactions for RNA: ENST00000638575.1

KCNMA1-240, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-240ENST00000638575 COA7Q96BR5 231 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 GJD2Q9UKL4 321 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 DNAH12Q6ZR08 3092 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 RPTORQ8N122 1335 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 NFIBO00712 420 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 TEX13BQ9BXU2 312 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 GJB2P29033 226 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 ANKRD13CQ8N6S4 541 aa11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
KCNMA1-240ENST00000638575 IRX3P78415 501 aaPredicted RBP11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 SSRP1Q08945 709 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 EARS2Q5JPH6 523 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 CPA4Q9UI42 421 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 ABCB11O95342 1321 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 DOCK5Q9H7D0 1870 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 TCHHQ07283 1943 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 PKP1Q13835 747 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 TAF1CQ15572 869 aaPredicted RBP11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 AMNQ9BXJ7 453 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 DHX16O60231 1041 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 TBC1D8O95759 1140 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 STAT3P40763 770 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 GRB14Q14449 540 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 TKFCQ3LXA3 575 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 CCDC174Q6PII3 467 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 FBXO11Q86XK2 927 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 TEX2Q8IWB9 1127 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 ARHGAP39Q9C0H5 1083 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 VAT1LQ9HCJ6 419 aa11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-240ENST00000638575 CDKL5O76039 1030 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 SNRNP48Q6IEG0 339 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 HSCBQ8IWL3 235 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 RIC8AQ9NPQ8 531 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 VPS54Q9P1Q0 977 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 KIF28PB7ZC32 967 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 RAD21O60216 631 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 GPRC5AQ8NFJ5 357 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 MORC4Q8TE76 937 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 DDX11Q96FC9 970 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 EFCC1Q9HA90 598 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 ZFYVE28Q9HCC9 887 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 A1CFQ9NQ94 594 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 CYP39A1Q9NYL5 469 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 MMP1P03956 469 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 ERCC3P19447 782 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 SLC30A10Q6XR72 485 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 PCDHA1Q9Y5I3 950 aa11.8□□□□□ -0.52
KCNMA1-240ENST00000638575 ZBED4O75132 1171 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 U2AF2P26368 475 aaKnown RBP eCLIP11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 HOMER1Q86YM7 354 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 FAM133AQ8N9E0 248 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 CHST13Q8NET6 341 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 SLC25A27O95847 323 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 ZNF792Q3KQV3 632 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 TRIM47Q96LD4 638 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 KATNBL1Q9H079 304 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 CCPG1Q9ULG6 757 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
KCNMA1-240ENST00000638575 WNT7AO00755 349 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 EDNRBP24530 442 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 SAMD3Q8N6K7 520 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 TRERF1Q96PN7 1200 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 COBLO75128 1261 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 SYT1P21579 422 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 GPR142Q7Z601 462 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 MROH8Q9H579 483 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 MAP3K20Q9NYL2 800 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 KCNJ14Q9UNX9 436 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 TRPA1O75762 1119 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 HOXC6P09630 235 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 KRT40Q6A162 431 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 RNF146Q9NTX7 359 aa11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 NAP1L2Q9ULW6 460 aaPredicted RBP11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 MKI67P46013 3256 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-240ENST00000638575 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 GPR25O00155 361 aa11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 PTPREP23469 700 aa11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 GRM1Q13255 1194 aa11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 USH1GQ495M9 461 aa11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 SYTL5Q8TDW5 730 aaPredicted RBP11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 PIBF1Q8WXW3 757 aa11.77□□□□□ -0.52
KCNMA1-240ENST00000638575 PNMA2Q9UL42 364 aa11.77□□□□□ -0.53
KCNMA1-240ENST00000638575 PCDHA4Q9UN74 947 aa11.77□□□□□ -0.53
KCNMA1-240ENST00000638575 CPLX1O14810 134 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms