RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ADCY6O43306 1168 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 CYP21A2P08686 494 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 ACLYP53396 1101 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
LIG1-215ENST00000597901 MDM2Q00987 491 aaPredicted RBP17.65■□□□□ 0.42
LIG1-215ENST00000597901 KCNA10Q16322 511 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 TRIM60Q495X7 471 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 CCSAPQ6IQ19 270 aaPredicted RBP17.65■□□□□ 0.42
LIG1-215ENST00000597901 CYB5R4Q7L1T6 521 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 UBAC1Q9BSL1 405 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 UBE2OQ9C0C9 1292 aaKnown RBP17.65■□□□□ 0.42
LIG1-215ENST00000597901 DDX49Q9Y6V7 483 aaKnown RBP17.65■□□□□ 0.42
LIG1-215ENST00000597901 ASTN1O14525 1302 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 TNKSO95271 1327 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 SYNRGQ9UMZ2 1314 aa17.65■□□□□ 0.42
LIG1-215ENST00000597901 GJA9P57773 515 aa17.64■□□□□ 0.41
LIG1-215ENST00000597901 TNFAIP2Q03169 654 aa17.64■□□□□ 0.41
LIG1-215ENST00000597901 TLE2Q04725 743 aa17.64■□□□□ 0.41
LIG1-215ENST00000597901 TRDNQ13061 729 aa17.64■□□□□ 0.41
LIG1-215ENST00000597901 MAP4K1Q92918 833 aa17.64■□□□□ 0.41
LIG1-215ENST00000597901 LBHD1Q9BQE6 289 aaPredicted RBP17.64■□□□□ 0.41
LIG1-215ENST00000597901 SPC25Q9HBM1 224 aa17.64■□□□□ 0.41
LIG1-215ENST00000597901 PRKAG2Q9UGJ0 569 aa17.64■□□□□ 0.41
LIG1-215ENST00000597901 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.63■□□□□ 0.41
LIG1-215ENST00000597901 A0A1W2PQ45 241 aaPredicted RBP17.63■□□□□ 0.41
LIG1-215ENST00000597901 A0A1W2PQY0 241 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 MYADML2A6NDP7 307 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 PARP1P09874 1014 aaKnown RBP17.63■□□□□ 0.41
LIG1-215ENST00000597901 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
LIG1-215ENST00000597901 SEC23AQ15436 765 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 ASPRV1Q53RT3 343 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 GNASQ5JWF2 1037 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 IFIT1BQ5T764 474 aaKnown RBP17.63■□□□□ 0.41
LIG1-215ENST00000597901 IQSEC1Q6DN90 963 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 TAPT1Q6NXT6 567 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 RNF207Q6ZRF8 634 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 EEPD1Q7L9B9 569 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 ADGRF4Q8IZF3 695 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 MORC4Q8TE76 937 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
LIG1-215ENST00000597901 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 PDGFCQ9NRA1 345 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 ADD3Q9UEY8 706 aaKnown RBP17.63■□□□□ 0.41
LIG1-215ENST00000597901 WDR19Q8NEZ3 1342 aa17.63■□□□□ 0.41
LIG1-215ENST00000597901 ALPK3Q96L96 1907 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 MOXD2PA6NHM9 499 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 CALML3P27482 149 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 CST5P28325 142 aaPredicted RBP17.62■□□□□ 0.41
LIG1-215ENST00000597901 NKX3-2P78367 333 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 NOL8Q76FK4 1167 aaKnown RBP17.62■□□□□ 0.41
LIG1-215ENST00000597901 PCSK9Q8NBP7 692 aaKnown RBP17.62■□□□□ 0.41
LIG1-215ENST00000597901 RGS22Q8NE09 1264 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 NUP133Q8WUM0 1156 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 SMCHD1A6NHR9 2005 aa17.62■□□□□ 0.41
LIG1-215ENST00000597901 E7EWF7 191 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 SOX1O00570 391 aaPredicted RBP17.61■□□□□ 0.41
LIG1-215ENST00000597901 CTAGE5O15320 804 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 SMPD1P17405 629 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 RPS6P62753 249 aaKnown RBP17.61■□□□□ 0.41
LIG1-215ENST00000597901 USH1GQ495M9 461 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 SH3RF1Q7Z6J0 888 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 TDHQ8IZJ6 230 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 STAG2Q8N3U4 1231 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 JMJD4Q9H9V9 463 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 PRDM5Q9NQX1 630 aaPredicted RBP17.61■□□□□ 0.41
LIG1-215ENST00000597901 STARD7Q9NQZ5 370 aa17.61■□□□□ 0.41
LIG1-215ENST00000597901 GNEQ9Y223 722 aaKnown RBP17.61■□□□□ 0.41
LIG1-215ENST00000597901 LOC102724159A0A0B4J2E5 919 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 TRIM43BA6NCK2 446 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 IFIT3O14879 490 aaKnown RBP17.6■□□□□ 0.41
LIG1-215ENST00000597901 DYNC1LI2O43237 492 aaPredicted RBP17.6■□□□□ 0.41
LIG1-215ENST00000597901 ASGR1P07306 291 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 ALDH5A1P51649 535 aaPredicted RBP17.6■□□□□ 0.41
LIG1-215ENST00000597901 PWP2Q15269 919 aaKnown RBP17.6■□□□□ 0.41
LIG1-215ENST00000597901 CDC37Q16543 378 aaPredicted RBP17.6■□□□□ 0.41
LIG1-215ENST00000597901 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 SLC30A10Q6XR72 485 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 KIAA1211Q6ZU35 1233 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
LIG1-215ENST00000597901 NCOA7Q8NI08 942 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 TBC1D5Q92609 795 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 VTI1AQ96AJ9 217 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 TRIM43Q96BQ3 446 aaPredicted RBP17.6■□□□□ 0.41
LIG1-215ENST00000597901 GLT1D1Q96MS3 346 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 VTA1Q9NP79 307 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 PDLIM7Q9NR12 457 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 ELP1O95163 1332 aa17.6■□□□□ 0.41
LIG1-215ENST00000597901 TRIOBPQ9H2D6 2365 aa17.59■□□□□ 0.41
LIG1-215ENST00000597901 PLXNA1Q9UIW2 1896 aa17.59■□□□□ 0.41
LIG1-215ENST00000597901 PALM3A6NDB9 673 aaPredicted RBP17.59■□□□□ 0.41
LIG1-215ENST00000597901 KLRF2D3W0D1 207 aa17.59■□□□□ 0.41
LIG1-215ENST00000597901 DHX16O60231 1041 aaKnown RBP17.59■□□□□ 0.41
LIG1-215ENST00000597901 BEX3Q00994 111 aa17.59■□□□□ 0.41
LIG1-215ENST00000597901 QRICH1Q2TAL8 776 aa17.59■□□□□ 0.41
LIG1-215ENST00000597901 LRIT3Q3SXY7 679 aa17.59■□□□□ 0.41
LIG1-215ENST00000597901 STOX1Q6ZVD7 989 aa17.59■□□□□ 0.41
LIG1-215ENST00000597901 RALYLQ86SE5 291 aaKnown RBP17.59■□□□□ 0.41
LIG1-215ENST00000597901 FBXO16Q8IX29 292 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms