RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 NCOA7Q8NI08 942 aa24.25■■□□□ 1.47
MBD3-205ENST00000589064 CLEC4DQ8WXI8 215 aa24.25■■□□□ 1.47
MBD3-205ENST00000589064 LSG1Q9H089 658 aaKnown RBP24.25■■□□□ 1.47
MBD3-205ENST00000589064 VAT1LQ9HCJ6 419 aa24.25■■□□□ 1.47
MBD3-205ENST00000589064 RBM27Q9P2N5 1060 aaKnown RBP24.25■■□□□ 1.47
MBD3-205ENST00000589064 PNMA2Q9UL42 364 aa24.25■■□□□ 1.47
MBD3-205ENST00000589064 ASTN1O14525 1302 aa24.24■■□□□ 1.47
MBD3-205ENST00000589064 CCDC144BQ3MJ40 725 aa24.24■■□□□ 1.47
MBD3-205ENST00000589064 CHST3Q7LGC8 479 aa24.24■■□□□ 1.47
MBD3-205ENST00000589064 RNF180Q86T96 592 aa24.24■■□□□ 1.47
MBD3-205ENST00000589064 WDR19Q8NEZ3 1342 aa24.23■■□□□ 1.47
MBD3-205ENST00000589064 PTPDC1A2A3K4 754 aa24.23■■□□□ 1.47
MBD3-205ENST00000589064 SLC39A5Q6ZMH5 540 aa24.23■■□□□ 1.47
MBD3-205ENST00000589064 STAG2Q8N3U4 1231 aa24.23■■□□□ 1.47
MBD3-205ENST00000589064 KATNBL1Q9H079 304 aa24.23■■□□□ 1.47
MBD3-205ENST00000589064 USH1GQ495M9 461 aa24.22■■□□□ 1.47
MBD3-205ENST00000589064 PRO3102Q9H379 93 aa24.22■■□□□ 1.47
MBD3-205ENST00000589064 SENP2Q9HC62 589 aa24.22■■□□□ 1.47
MBD3-205ENST00000589064 PCDH10Q9P2E7 1040 aa24.22■■□□□ 1.47
MBD3-205ENST00000589064 ERICH2A1L162 156 aa24.21■■□□□ 1.47
MBD3-205ENST00000589064 ADCY6O43306 1168 aa24.21■■□□□ 1.47
MBD3-205ENST00000589064 DHX16O60231 1041 aaKnown RBP24.21■■□□□ 1.47
MBD3-205ENST00000589064 ADAMTS4O75173 837 aa24.21■■□□□ 1.47
MBD3-205ENST00000589064 DUSP11O75319 330 aaKnown RBP24.21■■□□□ 1.47
MBD3-205ENST00000589064 CDC37Q16543 378 aaPredicted RBP24.21■■□□□ 1.47
MBD3-205ENST00000589064 PHF24Q9UPV7 400 aa24.21■■□□□ 1.47
MBD3-205ENST00000589064 LAMA4Q16363 1823 aa24.21■■□□□ 1.47
MBD3-205ENST00000589064 CALML3P27482 149 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 ANTXR2P58335 489 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 RTP1P59025 263 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 IRX5P78411 483 aaPredicted RBP24.2■■□□□ 1.47
MBD3-205ENST00000589064 RNF207Q6ZRF8 634 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 EEPD1Q7L9B9 569 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 JMJD4Q9H9V9 463 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 ANO2Q9NQ90 1003 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 ATP11BQ9Y2G3 1177 aa24.2■■□□□ 1.47
MBD3-205ENST00000589064 SYNRGQ9UMZ2 1314 aa24.2■■□□□ 1.46
MBD3-205ENST00000589064 KLRF2D3W0D1 207 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 WTAPQ15007 396 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 SLC30A10Q6XR72 485 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 MB21D2Q8IYB1 491 aaPredicted RBP24.19■■□□□ 1.46
MBD3-205ENST00000589064 ADD3Q9UEY8 706 aaKnown RBP24.19■■□□□ 1.46
MBD3-205ENST00000589064 MAD2L2Q9UI95 211 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.19■■□□□ 1.46
MBD3-205ENST00000589064 SLC27A2O14975 620 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 RPS6P62753 249 aaKnown RBP24.19■■□□□ 1.46
MBD3-205ENST00000589064 SART3Q15020 963 aaKnown RBP24.19■■□□□ 1.46
MBD3-205ENST00000589064 QRICH1Q2TAL8 776 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 TMEM67Q5HYA8 995 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 NOL8Q76FK4 1167 aaKnown RBP24.19■■□□□ 1.46
MBD3-205ENST00000589064 KLHDC9Q8NEP7 349 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 IGDCC4Q8TDY8 1250 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 GDF15Q99988 308 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 PDGFCQ9NRA1 345 aa24.19■■□□□ 1.46
MBD3-205ENST00000589064 MYADML2A6NDP7 307 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 SLC34A2O95436 690 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 TNFAIP2Q03169 654 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 KCNA10Q16322 511 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 CREB3L3Q68CJ9 461 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 MORC4Q8TE76 937 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 TBC1D5Q92609 795 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 TSEN34Q9BSV6 310 aaKnown RBP24.18■■□□□ 1.46
MBD3-205ENST00000589064 PLXNA1Q9UIW2 1896 aa24.18■■□□□ 1.46
MBD3-205ENST00000589064 PALM3A6NDB9 673 aaPredicted RBP24.17■■□□□ 1.46
MBD3-205ENST00000589064 C6orf222P0C671 652 aaPredicted RBP24.17■■□□□ 1.46
MBD3-205ENST00000589064 MAGEA10P43363 369 aaPredicted RBP24.17■■□□□ 1.46
MBD3-205ENST00000589064 ALDH5A1P51649 535 aaPredicted RBP24.17■■□□□ 1.46
MBD3-205ENST00000589064 NECTIN1Q15223 517 aa24.17■■□□□ 1.46
MBD3-205ENST00000589064 CCSAPQ6IQ19 270 aaPredicted RBP24.17■■□□□ 1.46
MBD3-205ENST00000589064 TAPT1Q6NXT6 567 aa24.17■■□□□ 1.46
MBD3-205ENST00000589064 FBXO11Q86XK2 927 aa24.17■■□□□ 1.46
MBD3-205ENST00000589064 FBXO16Q8IX29 292 aaPredicted RBP24.17■■□□□ 1.46
MBD3-205ENST00000589064 SPC25Q9HBM1 224 aa24.17■■□□□ 1.46
MBD3-205ENST00000589064 SMCHD1A6NHR9 2005 aa24.17■■□□□ 1.46
MBD3-205ENST00000589064 A0A1W2PQ45 241 aaPredicted RBP24.16■■□□□ 1.46
MBD3-205ENST00000589064 A0A1W2PQY0 241 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 NEFLP07196 543 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 ACLYP53396 1101 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 GJA9P57773 515 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 GRM4Q14833 912 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 TRIM60Q495X7 471 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 RGS22Q8NE09 1264 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 GPHNQ9NQX3 736 aaPredicted RBP24.16■■□□□ 1.46
MBD3-205ENST00000589064 ABCB11O95342 1321 aa24.16■■□□□ 1.46
MBD3-205ENST00000589064 FXR1P51114 621 aaKnown RBP eCLIP24.15■■□□□ 1.46
MBD3-205ENST00000589064 SNX17Q15036 470 aa24.15■■□□□ 1.46
MBD3-205ENST00000589064 IQSEC1Q6DN90 963 aa24.15■■□□□ 1.46
MBD3-205ENST00000589064 UPF3AQ9H1J1 476 aaKnown RBP24.15■■□□□ 1.46
MBD3-205ENST00000589064 ALPK3Q96L96 1907 aa24.15■■□□□ 1.46
MBD3-205ENST00000589064 PRC1O43663 620 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 CDC45O75419 566 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 SMPD1P17405 629 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 PTGS1P23219 599 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 TROAPQ12815 778 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 COL9A3Q14050 684 aaPredicted RBP24.14■■□□□ 1.46
MBD3-205ENST00000589064 SLC35G1Q2M3R5 365 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 GNASQ5JWF2 1037 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 TMEM63BQ5T3F8 832 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 CASC1Q6TDU7 716 aa24.14■■□□□ 1.46
MBD3-205ENST00000589064 CATIPQ7Z7H3 387 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms