RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 SNHG28P0DPA3 235 aa22.32■■□□□ 1.16
CLPTM1-206ENST00000586975 NT5C2P49902 561 aa22.32■■□□□ 1.16
CLPTM1-206ENST00000586975 BAATQ14032 418 aaPredicted RBP22.32■■□□□ 1.16
CLPTM1-206ENST00000586975 A0A1W2PQ45 241 aaPredicted RBP22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 A0A1W2PQY0 241 aa22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 NFIBO00712 420 aa22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 DUSP11O75319 330 aaKnown RBP22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 C6orf222P0C671 652 aaPredicted RBP22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 PTH1RQ03431 593 aa22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 GPATCH4Q5T3I0 446 aaKnown RBP22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 EEPD1Q7L9B9 569 aa22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 ENAHQ8N8S7 591 aaPredicted RBP22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 SPC25Q9HBM1 224 aa22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 SMCHD1A6NHR9 2005 aa22.31■■□□□ 1.16
CLPTM1-206ENST00000586975 ADCY6O43306 1168 aa22.3■■□□□ 1.16
CLPTM1-206ENST00000586975 IRX5P78411 483 aaPredicted RBP22.3■■□□□ 1.16
CLPTM1-206ENST00000586975 TRDNQ13061 729 aa22.3■■□□□ 1.16
CLPTM1-206ENST00000586975 KCNA10Q16322 511 aa22.3■■□□□ 1.16
CLPTM1-206ENST00000586975 USH1GQ495M9 461 aa22.3■■□□□ 1.16
CLPTM1-206ENST00000586975 MYADML2A6NDP7 307 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 DHX16O60231 1041 aaKnown RBP22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 CALML3P27482 149 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 ACLYP53396 1101 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 TLE2Q04725 743 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 IFIT1BQ5T764 474 aaKnown RBP22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 TDHQ8IZJ6 230 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 ANKS1AQ92625 1134 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 VTI1AQ96AJ9 217 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 STARD7Q9NQZ5 370 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 U3KPZ7 1027 aaPredicted RBP22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 ASTN1O14525 1302 aa22.29■■□□□ 1.16
CLPTM1-206ENST00000586975 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 SOX1O00570 391 aaPredicted RBP22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 PQBP1O60828 265 aaKnown RBP22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 TNFAIP2Q03169 654 aa22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 SNX17Q15036 470 aa22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 FBXO16Q8IX29 292 aaPredicted RBP22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 KLHDC9Q8NEP7 349 aa22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 NUP133Q8WUM0 1156 aa22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 TSEN34Q9BSV6 310 aaKnown RBP22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 KATNBL1Q9H079 304 aa22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 VAT1LQ9HCJ6 419 aa22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 PNMA2Q9UL42 364 aa22.28■■□□□ 1.16
CLPTM1-206ENST00000586975 LAMA4Q16363 1823 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 PARP1P09874 1014 aaKnown RBP22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 GNASQ5JWF2 1037 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 SLC30A10Q6XR72 485 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 RNF207Q6ZRF8 634 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 CYB5R4Q7L1T6 521 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 CLEC4DQ8WXI8 215 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 LRCH3Q96II8 777 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 PDGFCQ9NRA1 345 aa22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 ADD3Q9UEY8 706 aaKnown RBP22.27■■□□□ 1.16
CLPTM1-206ENST00000586975 MOXD2PA6NHM9 499 aa22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 SGSM2O43147 1006 aa22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 CYP21A2P08686 494 aa22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 GJA9P57773 515 aa22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 CDC37Q16543 378 aaPredicted RBP22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 ASPRV1Q53RT3 343 aa22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 SH3RF1Q7Z6J0 888 aa22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 PCSK9Q8NBP7 692 aaKnown RBP22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 PDLIM7Q9NR12 457 aa22.26■■□□□ 1.15
CLPTM1-206ENST00000586975 ASGR1P07306 291 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 ALDH5A1P51649 535 aaPredicted RBP22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 BEX3Q00994 111 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 C1orf53Q5VUE5 145 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 KIAA1211Q6ZU35 1233 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 RALYLQ86SE5 291 aaKnown RBP22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 ADGRF4Q8IZF3 695 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 GLT1D1Q96MS3 346 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 AP5M1Q9H0R1 490 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 WDR19Q8NEZ3 1342 aa22.25■■□□□ 1.15
CLPTM1-206ENST00000586975 DYNC1LI2O43237 492 aaPredicted RBP22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 CLTBP09497 229 aa22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 PTGS1P23219 599 aa22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 RPS6P62753 249 aaKnown RBP22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 CCSAPQ6IQ19 270 aaPredicted RBP22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 BADQ92934 168 aa22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 UPF3AQ9H1J1 476 aaKnown RBP22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 TAF6LQ9Y6J9 622 aa22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 SZT2Q5T011 3432 aa22.24■■□□□ 1.15
CLPTM1-206ENST00000586975 MCM3APO60318 1980 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 ERICH2A1L162 156 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 TRIM43BA6NCK2 446 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 E7EWF7 191 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 IFIT3O14879 490 aaKnown RBP22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 SMPD1P17405 629 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 CST5P28325 142 aaPredicted RBP22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 TAPT1Q6NXT6 567 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 CHST3Q7LGC8 479 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 TLK2Q86UE8 772 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 SKAP1Q86WV1 359 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 TRIM43Q96BQ3 446 aaPredicted RBP22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 VTA1Q9NP79 307 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 TMEM39AQ9NV64 488 aa22.23■■□□□ 1.15
CLPTM1-206ENST00000586975 SEC23AQ15436 765 aa22.22■■□□□ 1.15
CLPTM1-206ENST00000586975 QRICH1Q2TAL8 776 aa22.22■■□□□ 1.15
CLPTM1-206ENST00000586975 TMEM63BQ5T3F8 832 aa22.22■■□□□ 1.15
CLPTM1-206ENST00000586975 IQSEC1Q6DN90 963 aa22.22■■□□□ 1.15
CLPTM1-206ENST00000586975 STAG2Q8N3U4 1231 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms