RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 RESP18Q5W5W9 173 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 GRAMD1CQ8IYS0 662 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 STK11IPQ8N1F8 1099 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 CAGE1Q8TC20 777 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 AIFM3Q96NN9 605 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 GPR101Q96P66 508 aaPredicted RBP14.21□□□□□ -0.13
ITGB4-212ENST00000584558 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 COL11A2P13942 1736 aaPredicted RBP14.21□□□□□ -0.14
ITGB4-212ENST00000584558 ZBTB43O43298 467 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 BBOX1O75936 387 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 ATP1A2P50993 1020 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 SND1Q7KZF4 910 aaKnown RBP eCLIP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 TEX11Q8IYF3 940 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 MED15Q96RN5 788 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 RANBP6O60518 1105 aaKnown RBP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 SSBP05455 408 aaKnown RBP eCLIP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 RXRAP19793 462 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 ATP2B4P23634 1241 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 POSTNQ15063 836 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 SEC23AQ15436 765 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 KIRREL3Q8IZU9 778 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 JAG2Q9Y219 1238 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 CYP2D7A0A087X1C5 515 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 CALRP27797 417 aaKnown RBP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 ERVK-24P63145 666 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 GRIK5Q16478 980 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 SPTY2D1Q68D10 685 aaPredicted RBP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 ZNF804AQ7Z570 1209 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 CNGA4Q8IV77 575 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 MLKLQ8NB16 471 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 WDR66Q8TBY9 1149 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 RRP36Q96EU6 259 aaKnown RBP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 MYL10Q9BUA6 226 aa14.2□□□□□ -0.14
ITGB4-212ENST00000584558 DCP1AQ9NPI6 582 aaPredicted RBP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 AATFQ9NY61 560 aaKnown RBP eCLIP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
ITGB4-212ENST00000584558 MINDY4BA8MYZ0 360 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 PPP6R2O75170 966 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 GYPCP04921 128 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 ATP1A1P05023 1023 aaKnown RBP14.19□□□□□ -0.14
ITGB4-212ENST00000584558 IL1R1P14778 569 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 CDR1P51861 262 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 CLNS1AP54105 237 aaKnown RBP14.19□□□□□ -0.14
ITGB4-212ENST00000584558 CCDC40Q4G0X9 1142 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 TRAPPC11Q7Z392 1133 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 MICU3Q86XE3 530 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 TBC1D22AQ8WUA7 517 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 MYO1AQ9UBC5 1043 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 MYH2Q9UKX2 1941 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 CDK5RAP2Q96SN8 1893 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 RCAN1P53805 252 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 EVX2Q03828 476 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 RRP12Q5JTH9 1297 aaKnown RBP14.19□□□□□ -0.14
ITGB4-212ENST00000584558 CCNI2Q6ZMN8 369 aaPredicted RBP14.19□□□□□ -0.14
ITGB4-212ENST00000584558 RUFY1Q96T51 708 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 TRIM6Q9C030 488 aaPredicted RBP14.19□□□□□ -0.14
ITGB4-212ENST00000584558 SLC12A7Q9Y666 1083 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 SAR1BQ9Y6B6 198 aa14.19□□□□□ -0.14
ITGB4-212ENST00000584558 STK36Q9NRP7 1315 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 GOLGA8KD6RF30 607 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 UFL1O94874 794 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
ITGB4-212ENST00000584558 SBK1Q52WX2 424 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 NFXL1Q6ZNB6 911 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 SH3GL2Q99962 352 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 CRNKL1Q9BZJ0 848 aaKnown RBP14.18□□□□□ -0.14
ITGB4-212ENST00000584558 CD209Q9NNX6 404 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 ATP8A2Q9NTI2 1148 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 POLLQ9UGP5 575 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 DDX60LQ5H9U9 1706 aaKnown RBP14.18□□□□□ -0.14
ITGB4-212ENST00000584558 TARSL2A2RTX5 802 aaKnown RBP14.18□□□□□ -0.14
ITGB4-212ENST00000584558 CDKL5O76039 1030 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 CDC25AP30304 524 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 WTAPQ15007 396 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 PTPAQ15257 358 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 FKBP15Q5T1M5 1219 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 KCTD16Q68DU8 428 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 TMTC1Q8IUR5 882 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 FMNL3Q8IVF7 1028 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 NLGN1Q8N2Q7 840 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 TBC1D16Q8TBP0 767 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 NUP88Q99567 741 aaPredicted RBP14.18□□□□□ -0.14
ITGB4-212ENST00000584558 GGA1Q9UJY5 639 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 TFR2Q9UP52 801 aa14.18□□□□□ -0.14
ITGB4-212ENST00000584558 USP17L12C9JPN9 530 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 USP17L21D6R901 530 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 CCT6AP40227 531 aaKnown RBP14.17□□□□□ -0.14
ITGB4-212ENST00000584558 SARNPP82979 210 aaKnown RBP14.17□□□□□ -0.14
ITGB4-212ENST00000584558 E2F5Q15329 346 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 MICALCLQ6ZW33 695 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 SH2D3CQ8N5H7 860 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 ESR2Q92731 530 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 ARL8AQ96BM9 186 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 SCLT1Q96NL6 688 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 STK32BQ9NY57 414 aa14.17□□□□□ -0.14
ITGB4-212ENST00000584558 SERTAD1Q9UHV2 236 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms