RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 PLCB3Q01970 1234 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 MFSD4BQ5TF39 518 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 CDC37L1Q7L3B6 337 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 TRIM74Q86UV6 250 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 TRIM73Q86UV7 250 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 KIAA0825Q8IV33 1275 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 PALM2Q8IXS6 379 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 SEPT8Q92599 483 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 ELAC2Q9BQ52 826 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 MAK16Q9BXY0 300 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 NAPBQ9H115 298 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 BOLA2Q9H3K6 86 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 TAF1DQ9H5J8 278 aaPredicted RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 EHMT1Q9H9B1 1298 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 BTBD7Q9P203 1132 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 COMMD3-BMI1R4GMX3 469 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 TOP2BQ02880 1626 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 USP19O94966 1318 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 CLASP2O75122 1294 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 AP1G2O75843 785 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 RARS2Q5T160 578 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 WDR93Q6P2C0 686 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 NUDCD3Q8IVD9 361 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 NAF1Q96HR8 494 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 SEC16BQ96JE7 1060 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 MMADHCQ9H3L0 296 aaPredicted RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 ZCCHC17Q9NP64 241 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 DNAJC17Q9NVM6 304 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 ARHGAP26Q9UNA1 814 aa9.57□□□□□ -0.88
PPFIA2-220ENST00000550584 SBNO1A3KN83 1393 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 TEX14Q8IWB6 1497 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 KCNJ18B7U540 433 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CBFA2T3O75081 653 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ANP32DO95626 131 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 TRPC1P48995 793 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 STX17P56962 302 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 KCNJ12Q14500 433 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 PTGISQ16647 500 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ZKSCAN4Q969J2 545 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 THAP11Q96EK4 314 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CRNKL1Q9BZJ0 848 aaKnown RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CD209Q9NNX6 404 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 GIPC1O14908 333 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CAV1Q03135 178 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 RTN1Q16799 776 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 USH1GQ495M9 461 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 WDR60Q8WVS4 1066 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 COQ7Q99807 217 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 FTOQ9C0B1 505 aaKnown RBP eCLIP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 KCNF1Q9H3M0 494 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 O00370 1275 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 P4HA2O15460 535 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ATP6V1G2O95670 118 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 TBC1D8O95759 1140 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 TNFAIP3P21580 790 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 KRT6CP48668 564 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 NUP107P57740 925 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 DNAL1Q4LDG9 190 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 BEND6Q5SZJ8 279 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ATG16L1Q676U5 607 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 NELFBQ8WX92 580 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 LRRC37BQ96QE4 947 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ZMYND12Q9H0C1 365 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 GIMAP4Q9NUV9 329 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ATAD3AQ9NVI7 634 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 SESN1Q9Y6P5 492 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 PITPNM2Q9BZ72 1349 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 THAP12O43422 761 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 SCG2P13521 617 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 POLR2EP19388 210 aaKnown RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 GSCP56915 257 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 DEFA1P59665 94 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 DEFA3P59666 94 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 MDM2Q00987 491 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 RASGRF1Q13972 1273 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 SPARCL1Q14515 664 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CCDC153Q494R4 210 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ZNF554Q86TJ5 538 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 TTC6Q86TZ1 520 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CSGALNACT2Q8N6G5 542 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CYFIP2Q96F07 1278 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 FAM81BQ96LP2 452 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 DLGAP2Q9P1A6 1054 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 ZFP69BQ9UJL9 534 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 CARD8Q9Y2G2 431 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 SLC4A7Q9Y6M7 1214 aa9.56□□□□□ -0.88
PPFIA2-220ENST00000550584 GOLGA8CPA6NN73 597 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 MYO1FO00160 1098 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 LSP1P33241 339 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 RIPPLY1Q0D2K3 151 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 RAD21L1Q9H4I0 556 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 TMOD2Q9NZR1 351 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 GMEB1Q9Y692 573 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 CYTH3O43739 400 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 SERPINB1P30740 379 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms