RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 COL9A1P20849 921 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 CNGA1P29973 690 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 ZNF543Q08ER8 600 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 APOBRQ0VD83 1088 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 GRM4Q14833 912 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 WDR78Q5VTH9 848 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 MFSD14CQ5VZR4 134 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 CATSPERGQ6ZRH7 1159 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 FAM160B2Q86V87 743 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 FANCBQ8NB91 859 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
LTBR-214ENST00000545445 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.21
LTBR-214ENST00000545445 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
LTBR-214ENST00000545445 RAPGEFL1Q9UHV5 662 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 BRPF3Q9ULD4 1205 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 LIMCH1Q9UPQ0 1083 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
LTBR-214ENST00000545445 NID2Q14112 1375 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
LTBR-214ENST00000545445 GOLGA8BA8MQT2 603 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 CNMDO75829 334 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 FDX1P10109 184 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 SMARCA1P28370 1054 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 PDIA3P30101 505 aaKnown RBP13.76□□□□□ -0.21
LTBR-214ENST00000545445 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
LTBR-214ENST00000545445 STAT2P52630 851 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 CCDC96Q2M329 555 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 KIAA1755Q5JYT7 1200 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 BTNL9Q6UXG8 535 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 MICU3Q86XE3 530 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 GTF3C2Q8WUA4 911 aaPredicted RBP13.76□□□□□ -0.21
LTBR-214ENST00000545445 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 SYMPKQ92797 1274 aaKnown RBP13.76□□□□□ -0.21
LTBR-214ENST00000545445 BADQ92934 168 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 TANGO6Q9C0B7 1094 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 HOXC10Q9NYD6 342 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
LTBR-214ENST00000545445 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
LTBR-214ENST00000545445 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
LTBR-214ENST00000545445 CYP2C19P33261 490 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 SMAD3P84022 425 aaKnown RBP13.75□□□□□ -0.21
LTBR-214ENST00000545445 COG2Q14746 738 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 RTN1Q16799 776 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 TRIM60Q495X7 471 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 GJC2Q5T442 439 aaPredicted RBP13.75□□□□□ -0.21
LTBR-214ENST00000545445 PRPF38AQ8NAV1 312 aaKnown RBP13.75□□□□□ -0.21
LTBR-214ENST00000545445 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 SH2B1Q9NRF2 756 aaPredicted RBP13.75□□□□□ -0.21
LTBR-214ENST00000545445 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
LTBR-214ENST00000545445 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
LTBR-214ENST00000545445 KLRF2D3W0D1 207 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 MSCO60682 206 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 FLOT1O75955 427 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 IKQ13123 557 aaPredicted RBP13.74□□□□□ -0.21
LTBR-214ENST00000545445 ANO1Q5XXA6 986 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
LTBR-214ENST00000545445 LBX2Q6XYB7 198 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 SNX21Q969T3 373 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 NUP88Q99567 741 aaPredicted RBP13.74□□□□□ -0.21
LTBR-214ENST00000545445 SLF1Q9BQI6 1058 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 SLKQ9H2G2 1235 aaPredicted RBP13.74□□□□□ -0.21
LTBR-214ENST00000545445 PDLIM7Q9NR12 457 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 PPP1R9AQ9ULJ8 1098 aa13.74□□□□□ -0.21
LTBR-214ENST00000545445 SLC15A5A6NIM6 579 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 PFKFB2O60825 505 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
LTBR-214ENST00000545445 PTPREP23469 700 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 DSG3P32926 999 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 SH3RF1Q7Z6J0 888 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 MB21D1Q8N884 522 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 NPLOC4Q8TAT6 608 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 GPCPD1Q9NPB8 672 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 PNMA2Q9UL42 364 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
LTBR-214ENST00000545445 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
LTBR-214ENST00000545445 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 KBTBD13C9JR72 458 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 TNFRSF10AO00220 468 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 CDKL5O76039 1030 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 CYBAP13498 195 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 RXRAP19793 462 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 CCNA1P78396 465 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 GRB14Q14449 540 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 SLC39A5Q6ZMH5 540 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 TMTC3Q6ZXV5 915 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
LTBR-214ENST00000545445 SPZ1Q9BXG8 430 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 ADAMTS5Q9UNA0 930 aa13.72□□□□□ -0.21
LTBR-214ENST00000545445 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms