RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 PPP1R11O60927 126 aaPredicted RBP13.46□□□□□ -0.25
C2CD3-217ENST00000542452 CNGA1P29973 690 aa13.46□□□□□ -0.25
C2CD3-217ENST00000542452 QRICH1Q2TAL8 776 aa13.46□□□□□ -0.25
C2CD3-217ENST00000542452 ADCK5Q3MIX3 580 aa13.46□□□□□ -0.25
C2CD3-217ENST00000542452 ARMCX2Q7L311 632 aa13.46□□□□□ -0.25
C2CD3-217ENST00000542452 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.25
C2CD3-217ENST00000542452 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.25
C2CD3-217ENST00000542452 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 CYTH3O43739 400 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 COL6A1P12109 1028 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 USH1GQ495M9 461 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 CASC1Q6TDU7 716 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 KCNB2Q92953 911 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
C2CD3-217ENST00000542452 NRBP1Q9UHY1 535 aa13.45□□□□□ -0.26
C2CD3-217ENST00000542452 CEP290O15078 2479 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 BAATQ14032 418 aaPredicted RBP13.44□□□□□ -0.26
C2CD3-217ENST00000542452 PRPF38BQ5VTL8 546 aaKnown RBP13.44□□□□□ -0.26
C2CD3-217ENST00000542452 RAB11FIP4Q86YS3 637 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 ZNF654Q8IZM8 581 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 MSL3Q8N5Y2 521 aaKnown RBP13.44□□□□□ -0.26
C2CD3-217ENST00000542452 TBC1D5Q92609 795 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 C11orf49Q9H6J7 331 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 VAT1LQ9HCJ6 419 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
C2CD3-217ENST00000542452 ZHX1Q9UKY1 873 aaPredicted RBP13.44□□□□□ -0.26
C2CD3-217ENST00000542452 ERICH2A1L162 156 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 OPLAHO14841 1288 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 MSCO60682 206 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 CAPN2P17655 700 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 RXRAP19793 462 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 PTGS1P23219 599 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 MCM5P33992 734 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 HSPA4P34932 840 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
C2CD3-217ENST00000542452 SART3Q15020 963 aaKnown RBP13.43□□□□□ -0.26
C2CD3-217ENST00000542452 TSGA10IPQ3SY00 556 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
C2CD3-217ENST00000542452 NECAB2Q7Z6G3 386 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 MTA3Q9BTC8 594 aa13.43□□□□□ -0.26
C2CD3-217ENST00000542452 ABCB11O95342 1321 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
C2CD3-217ENST00000542452 PTPDC1A2A3K4 754 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 MYADML2A6NDP7 307 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
C2CD3-217ENST00000542452 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 DDAH1O94760 285 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 PLEKHA8P1O95397 391 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 AKR1A1P14550 325 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 CPA1P15085 419 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 CALML3P27482 149 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 ALDH5A1P51649 535 aaPredicted RBP13.42□□□□□ -0.26
C2CD3-217ENST00000542452 RPS6P62753 249 aaKnown RBP13.42□□□□□ -0.26
C2CD3-217ENST00000542452 EXOSC10Q01780 885 aaKnown RBP13.42□□□□□ -0.26
C2CD3-217ENST00000542452 ACVR2BQ13705 512 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 LRRC41Q15345 812 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 FBXO16Q8IX29 292 aaPredicted RBP13.42□□□□□ -0.26
C2CD3-217ENST00000542452 MORC4Q8TE76 937 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 NUP133Q8WUM0 1156 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 TMEM87BQ96K49 555 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 PIGSQ96S52 555 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 RIOX1Q9H6W3 641 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 CNPY2Q9Y2B0 182 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 SNX14Q9Y5W7 946 aa13.42□□□□□ -0.26
C2CD3-217ENST00000542452 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 LTBP2Q14767 1821 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 KIAA1217Q5T5P2 1943 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 DNM1LO00429 736 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 PGK1P00558 417 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 LIFRP42702 1097 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 LRRC26Q2I0M4 334 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 TMEM63BQ5T3F8 832 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 RNF20Q5VTR2 975 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 RNF207Q6ZRF8 634 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 CATIPQ7Z7H3 387 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 FBXO11Q86XK2 927 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 HOMER1Q86YM7 354 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 HTATIP2Q9BUP3 242 aa13.41□□□□□ -0.26
C2CD3-217ENST00000542452 H0YGN5 161 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 ZBTB5O15062 677 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 RARBP10826 455 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 EDNRBP24530 442 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 CCDC144BQ3MJ40 725 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 EEPD1Q7L9B9 569 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
C2CD3-217ENST00000542452 SYTL5Q8TDW5 730 aaPredicted RBP13.4□□□□□ -0.26
C2CD3-217ENST00000542452 DPF3Q92784 378 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 ABHD16BQ9H3Z7 469 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 XPNPEP3Q9NQH7 507 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 PDGFCQ9NRA1 345 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
C2CD3-217ENST00000542452 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms