RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SYNGAP1Q96PV0 1343 aa16.63■□□□□ 0.25
LTBR-209ENST00000541102 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 PGK1P00558 417 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 AKR1A1P14550 325 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 SYN1P17600 705 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 ACVR2BQ13705 512 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 LRRC41Q15345 812 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
LTBR-209ENST00000541102 IFIT1BQ5T764 474 aaKnown RBP16.62■□□□□ 0.25
LTBR-209ENST00000541102 ARMCX2Q7L311 632 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 MB21D2Q8IYB1 491 aaPredicted RBP16.62■□□□□ 0.25
LTBR-209ENST00000541102 FERMT2Q96AC1 680 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
LTBR-209ENST00000541102 SNX14Q9Y5W7 946 aa16.62■□□□□ 0.25
LTBR-209ENST00000541102 ALPK3Q96L96 1907 aa16.61■□□□□ 0.25
LTBR-209ENST00000541102 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
LTBR-209ENST00000541102 ADCYAP1R1P41586 468 aa16.61■□□□□ 0.25
LTBR-209ENST00000541102 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
LTBR-209ENST00000541102 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
LTBR-209ENST00000541102 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
LTBR-209ENST00000541102 CYP39A1Q9NYL5 469 aa16.61■□□□□ 0.25
LTBR-209ENST00000541102 DDX49Q9Y6V7 483 aaKnown RBP16.61■□□□□ 0.25
LTBR-209ENST00000541102 TRIOBPQ9H2D6 2365 aa16.61■□□□□ 0.25
LTBR-209ENST00000541102 FRMPD3Q5JV73 1810 aa16.61■□□□□ 0.25
LTBR-209ENST00000541102 PTPDC1A2A3K4 754 aa16.6■□□□□ 0.25
LTBR-209ENST00000541102 NFIBO00712 420 aa16.6■□□□□ 0.25
LTBR-209ENST00000541102 IFIT3O14879 490 aaKnown RBP16.6■□□□□ 0.25
LTBR-209ENST00000541102 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
LTBR-209ENST00000541102 CPA1P15085 419 aa16.6■□□□□ 0.25
LTBR-209ENST00000541102 BAATQ14032 418 aaPredicted RBP16.6■□□□□ 0.25
LTBR-209ENST00000541102 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
LTBR-209ENST00000541102 RNF180Q86T96 592 aa16.6■□□□□ 0.25
LTBR-209ENST00000541102 ABHD16BQ9H3Z7 469 aa16.6■□□□□ 0.25
LTBR-209ENST00000541102 PCDH10Q9P2E7 1040 aa16.6■□□□□ 0.25
LTBR-209ENST00000541102 RBM27Q9P2N5 1060 aaKnown RBP16.6■□□□□ 0.25
LTBR-209ENST00000541102 ASB14A6NK59 587 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 SEC23AQ15436 765 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 CCDC144BQ3MJ40 725 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 USH1GQ495M9 461 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 ASPRV1Q53RT3 343 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 TCEANC2Q96MN5 208 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 PNMA2Q9UL42 364 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 ATP11BQ9Y2G3 1177 aa16.59■□□□□ 0.25
LTBR-209ENST00000541102 MCM3APO60318 1980 aa16.58■□□□□ 0.25
LTBR-209ENST00000541102 ERICH2A1L162 156 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 CALML3P27482 149 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 RTP1P59025 263 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
LTBR-209ENST00000541102 RNF20Q5VTR2 975 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 SLC39A5Q6ZMH5 540 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.24
LTBR-209ENST00000541102 EEPD1Q7L9B9 569 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 CLEC4DQ8WXI8 215 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 LRRC2Q9BYS8 371 aa16.58■□□□□ 0.24
LTBR-209ENST00000541102 WDR19Q8NEZ3 1342 aa16.57■□□□□ 0.24
LTBR-209ENST00000541102 SYNRGQ9UMZ2 1314 aa16.57■□□□□ 0.24
LTBR-209ENST00000541102 EPB41L2O43491 1005 aaKnown RBP16.57■□□□□ 0.24
LTBR-209ENST00000541102 DUSP11O75319 330 aaKnown RBP16.57■□□□□ 0.24
LTBR-209ENST00000541102 STAG2Q8N3U4 1231 aa16.57■□□□□ 0.24
LTBR-209ENST00000541102 IGDCC4Q8TDY8 1250 aa16.57■□□□□ 0.24
LTBR-209ENST00000541102 KATNBL1Q9H079 304 aa16.57■□□□□ 0.24
LTBR-209ENST00000541102 JMJD4Q9H9V9 463 aa16.57■□□□□ 0.24
LTBR-209ENST00000541102 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
LTBR-209ENST00000541102 PHF24Q9UPV7 400 aa16.57■□□□□ 0.24
LTBR-209ENST00000541102 ASTN1O14525 1302 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 KLRF2D3W0D1 207 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 ADCY6O43306 1168 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 PRC1O43663 620 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 ADAMTS4O75173 837 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 C6orf222P0C671 652 aaPredicted RBP16.56■□□□□ 0.24
LTBR-209ENST00000541102 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
LTBR-209ENST00000541102 TNFAIP2Q03169 654 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 WTAPQ15007 396 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
LTBR-209ENST00000541102 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
LTBR-209ENST00000541102 NEK1Q96PY6 1258 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 SPC25Q9HBM1 224 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 PDGFCQ9NRA1 345 aa16.56■□□□□ 0.24
LTBR-209ENST00000541102 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.55■□□□□ 0.24
LTBR-209ENST00000541102 MYADML2A6NDP7 307 aa16.55■□□□□ 0.24
LTBR-209ENST00000541102 MAGEA10P43363 369 aaPredicted RBP16.55■□□□□ 0.24
LTBR-209ENST00000541102 RPS6P62753 249 aaKnown RBP16.55■□□□□ 0.24
LTBR-209ENST00000541102 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
LTBR-209ENST00000541102 KCNA10Q16322 511 aa16.55■□□□□ 0.24
LTBR-209ENST00000541102 QRICH1Q2TAL8 776 aa16.55■□□□□ 0.24
LTBR-209ENST00000541102 TRIM60Q495X7 471 aa16.55■□□□□ 0.24
LTBR-209ENST00000541102 FBXO16Q8IX29 292 aaPredicted RBP16.55■□□□□ 0.24
LTBR-209ENST00000541102 PRO3102Q9H379 93 aa16.55■□□□□ 0.24
LTBR-209ENST00000541102 SLC34A2O95436 690 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 ALDH5A1P51649 535 aaPredicted RBP16.54■□□□□ 0.24
LTBR-209ENST00000541102 ACLYP53396 1101 aa16.54■□□□□ 0.24
LTBR-209ENST00000541102 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
LTBR-209ENST00000541102 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms