RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 ACER1Q8TDN7 264 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 GTF3C2Q8WUA4 911 aaPredicted RBP7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 USP6NLQ92738 828 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 COA7Q96BR5 231 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 SHISA4Q96DD7 197 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 TRIM34Q9BYJ4 488 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 PAK6Q9NQU5 681 aaPredicted RBP7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 ATP8A2Q9NTI2 1148 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 ECHDC1Q9NTX5 307 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 RABGAP1Q9Y3P9 1069 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 PCDHB15Q9Y5E8 787 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 ARAP2Q8WZ64 1704 aa7.18□□□□□ -1.26
CCDC90B-204ENST00000525504 BRCA2P51587 3418 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 AKAP11Q9UKA4 1901 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 SCO2A0A1W2PP80 73 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L15C9J2P7 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L13C9JLJ4 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L11C9JVI0 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L18D6R9N7 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L22D6RA61 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L17D6RBQ6 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L19D6RCP7 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L20D6RJB6 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 PRKAB2O43741 272 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 SGPL1O95470 568 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 IGHA2P01877 340 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 INHAP05111 366 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 POLR3DP05423 398 aaPredicted RBP7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP14P54578 494 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 IRX3P78415 501 aaPredicted RBP7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L24Q0WX57 530 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 SLFNL1Q499Z3 407 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 ARTNQ5T4W7 220 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 MAP3K21Q5TCX8 1036 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 C12orf60Q5U649 245 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 CATSPERGQ6ZRH7 1159 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 U2AF1L4Q8WU68 220 aaKnown RBP7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 CCDC17Q96LX7 622 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 TRERF1Q96PN7 1200 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 STRBPQ96SI9 672 aaKnown RBP7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 DNAJC2Q99543 621 aaKnown RBP7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 RNF208Q9H0X6 261 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 ARMT1Q9H993 441 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 CABP5Q9NP86 173 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 ZFP64Q9NPA5 681 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 MCM9Q9NXL9 1143 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 SWAP70Q9UH65 585 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 CEP290O15078 2479 aa7.17□□□□□ -1.26
CCDC90B-204ENST00000525504 A0A1W2PRG0 241 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L12C9JPN9 530 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 USP17L21D6R901 530 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 SMARCA5O60264 1052 aaPredicted RBP7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 CNMDO75829 334 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 MBD4O95243 580 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 MYCP01106 439 aaPredicted RBP7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 CHGBP05060 677 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 CYP2D6P10635 497 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 ELNP15502 786 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 VCAM1P19320 739 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 MAPK4P31152 587 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 MAP2K3P46734 347 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 ERVK-24P63145 666 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 SEPT2Q15019 361 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 SBK1Q52WX2 424 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 ZSCAN25Q6NSZ9 544 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 GIMAP6Q6P9H5 292 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 TMEM179Q6ZVK1 233 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 LYSMD3Q7Z3D4 306 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 KBTBD3Q8NAB2 608 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 SDR42E1Q8WUS8 393 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 GCC1Q96CN9 775 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 PUS7LQ9H0K6 701 aaKnown RBP7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 ZNF395Q9H8N7 513 aaPredicted RBP7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 HOXC10Q9NYD6 342 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 TMX2Q9Y320 296 aa7.16□□□□□ -1.26
CCDC90B-204ENST00000525504 ECM29Q5VYK3 1845 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 RANBP2P49792 3224 aaKnown RBP7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 GSG1L2A8MUP6 293 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 SMIM22K7EJ46 135 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 PEX10O60683 326 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 HMGCRP04035 888 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 HOXC6P09630 235 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 MX2P20592 715 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 CDK8P49336 464 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 COG2Q14746 738 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 GRIN2CQ14957 1233 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 RAB3GAP1Q15042 981 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 FOXD4L5Q5VV16 416 aaPredicted RBP7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 CTR9Q6PD62 1173 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 SLC44A5Q8NCS7 719 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 SOCS4Q8WXH5 440 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 OSBP2Q969R2 916 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 DYNLL2Q96FJ2 89 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 OXCT2Q9BYC2 517 aaPredicted RBP7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 PORCNQ9H237 461 aa7.15□□□□□ -1.26
CCDC90B-204ENST00000525504 BIN2Q9UBW5 565 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms