RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
FAM3B-206ENST00000518236 ACVR2BQ13705 512 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 SNX17Q15036 470 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
FAM3B-206ENST00000518236 CCDC144CPQ8IYA2 1237 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 ENAHQ8N8S7 591 aaPredicted RBP12.66□□□□□ -0.38
FAM3B-206ENST00000518236 KLHDC9Q8NEP7 349 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
FAM3B-206ENST00000518236 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
FAM3B-206ENST00000518236 FAM184BQ9ULE4 1060 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 PHF24Q9UPV7 400 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
FAM3B-206ENST00000518236 MYADML2A6NDP7 307 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 KBTBD13C9JR72 458 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 NFIBO00712 420 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 CYP21A2P08686 494 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 RTP1P59025 263 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 SEC23AQ15436 765 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 CYB5R4Q7L1T6 521 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 IQCA1Q86XH1 822 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 ABHD16BQ9H3Z7 469 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 SMCHD1A6NHR9 2005 aa12.65□□□□□ -0.38
FAM3B-206ENST00000518236 TNKSO95271 1327 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 SYNRGQ9UMZ2 1314 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 A0A1W2PPC1 479 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 CTAGE5O15320 804 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
FAM3B-206ENST00000518236 BAATQ14032 418 aaPredicted RBP12.64□□□□□ -0.39
FAM3B-206ENST00000518236 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 CCDC178Q5BJE1 867 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 GPATCH4Q5T3I0 446 aaKnown RBP12.64□□□□□ -0.39
FAM3B-206ENST00000518236 C1orf53Q5VUE5 145 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 RNF180Q86T96 592 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 MORC4Q8TE76 937 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 KRT23Q9C075 422 aa12.64□□□□□ -0.39
FAM3B-206ENST00000518236 WDR19Q8NEZ3 1342 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 PLXNA1Q9UIW2 1896 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
FAM3B-206ENST00000518236 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
FAM3B-206ENST00000518236 PTGS1P23219 599 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 NKX3-2P78367 333 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 TMEM63BQ5T3F8 832 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 STOX1Q6ZVD7 989 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
FAM3B-206ENST00000518236 UPF3AQ9H1J1 476 aaKnown RBP12.63□□□□□ -0.39
FAM3B-206ENST00000518236 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 CNNM2Q9H8M5 875 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
FAM3B-206ENST00000518236 LAMA2P24043 3122 aaKnown RBP12.63□□□□□ -0.39
FAM3B-206ENST00000518236 A0A1W2PQ45 241 aaPredicted RBP12.62□□□□□ -0.39
FAM3B-206ENST00000518236 A0A1W2PQY0 241 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 ASB14A6NK59 587 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 CST5P28325 142 aaPredicted RBP12.62□□□□□ -0.39
FAM3B-206ENST00000518236 ACLYP53396 1101 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 GJA9P57773 515 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
FAM3B-206ENST00000518236 KCNA10Q16322 511 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 LCE2DQ5TA82 110 aaPredicted RBP12.62□□□□□ -0.39
FAM3B-206ENST00000518236 TAPT1Q6NXT6 567 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 SLC30A10Q6XR72 485 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 GNEQ9Y223 722 aaKnown RBP12.62□□□□□ -0.39
FAM3B-206ENST00000518236 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
FAM3B-206ENST00000518236 TRIM43BA6NCK2 446 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 E7EWF7 191 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 SMPD1P17405 629 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
FAM3B-206ENST00000518236 TLE2Q04725 743 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 CDC37Q16543 378 aaPredicted RBP12.61□□□□□ -0.39
FAM3B-206ENST00000518236 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 ASPRV1Q53RT3 343 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 TBC1D5Q92609 795 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 TRIM43Q96BQ3 446 aaPredicted RBP12.61□□□□□ -0.39
FAM3B-206ENST00000518236 UBAC1Q9BSL1 405 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 JMJD4Q9H9V9 463 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 PDLIM7Q9NR12 457 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
FAM3B-206ENST00000518236 MOXD2PA6NHM9 499 aa12.6□□□□□ -0.39
FAM3B-206ENST00000518236 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
FAM3B-206ENST00000518236 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
FAM3B-206ENST00000518236 ITGB8P26012 769 aa12.6□□□□□ -0.39
FAM3B-206ENST00000518236 ALDH5A1P51649 535 aaPredicted RBP12.6□□□□□ -0.39
FAM3B-206ENST00000518236 ANTXR2P58335 489 aa12.6□□□□□ -0.39
FAM3B-206ENST00000518236 TNFAIP2Q03169 654 aa12.6□□□□□ -0.39
FAM3B-206ENST00000518236 COL9A3Q14050 684 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms