RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 TMEM87BQ96K49 555 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 CPVLQ9H3G5 476 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 FAM184BQ9ULE4 1060 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 FRMPD3Q5JV73 1810 aa24.69■■□□□ 1.54
TRAPPC11-203ENST00000504526 MKI67P46013 3256 aaKnown RBP24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 LOC102724159A0A0B4J2E5 919 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 PALM3A6NDB9 673 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 SOWAHBA6NEL2 793 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 KLRF2D3W0D1 207 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 NFIBO00712 420 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 ACVR2BQ13705 512 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 GRM4Q14833 912 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 PWP2Q15269 919 aaKnown RBP24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 ANO1Q5XXA6 986 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 CCDC144CPQ8IYA2 1237 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 TMTC2Q8N394 836 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 CLEC4DQ8WXI8 215 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 ADD3Q9UEY8 706 aaKnown RBP24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 MAD2L2Q9UI95 211 aa24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 ZHX1Q9UKY1 873 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC11-203ENST00000504526 ABCB11O95342 1321 aa24.67■■□□□ 1.54
TRAPPC11-203ENST00000504526 KBTBD13C9JR72 458 aa24.67■■□□□ 1.54
TRAPPC11-203ENST00000504526 PRC1O43663 620 aa24.67■■□□□ 1.54
TRAPPC11-203ENST00000504526 BAATQ14032 418 aaPredicted RBP24.67■■□□□ 1.54
TRAPPC11-203ENST00000504526 RGS22Q8NE09 1264 aa24.67■■□□□ 1.54
TRAPPC11-203ENST00000504526 XPNPEP3Q9NQH7 507 aa24.67■■□□□ 1.54
TRAPPC11-203ENST00000504526 PTPDC1A2A3K4 754 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 TROAPQ12815 778 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 USH1GQ495M9 461 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 RNF207Q6ZRF8 634 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 FBXO11Q86XK2 927 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 STAG2Q8N3U4 1231 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 MAP3K14Q99558 947 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 JMJD4Q9H9V9 463 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 VAT1LQ9HCJ6 419 aa24.66■■□□□ 1.54
TRAPPC11-203ENST00000504526 H0YGN5 161 aa24.65■■□□□ 1.54
TRAPPC11-203ENST00000504526 QRICH1Q2TAL8 776 aa24.65■■□□□ 1.54
TRAPPC11-203ENST00000504526 TSGA10IPQ3SY00 556 aa24.65■■□□□ 1.54
TRAPPC11-203ENST00000504526 RNF180Q86T96 592 aa24.65■■□□□ 1.54
TRAPPC11-203ENST00000504526 LY9Q9HBG7 655 aa24.65■■□□□ 1.54
TRAPPC11-203ENST00000504526 SENP2Q9HC62 589 aa24.65■■□□□ 1.54
TRAPPC11-203ENST00000504526 DDAH1O94760 285 aa24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 LIFRP42702 1097 aa24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 TRAF1Q13077 416 aa24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 KRT32Q14532 448 aa24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 LRRC41Q15345 812 aa24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 GJC2Q5T442 439 aaPredicted RBP24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 MCF2L2Q86YR7 1114 aa24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 MTMR8Q96EF0 704 aa24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 MPHOSPH6Q99547 160 aaKnown RBP24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 MRPL11Q9Y3B7 192 aaKnown RBP24.64■■□□□ 1.54
TRAPPC11-203ENST00000504526 SH2B2O14492 632 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 DUSP11O75319 330 aaKnown RBP24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 RPS6P62753 249 aaKnown RBP24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 ZNF654Q8IZM8 581 aa24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 MORC4Q8TE76 937 aa24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 NEK1Q96PY6 1258 aa24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 AMNQ9BXJ7 453 aa24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 SENP6Q9GZR1 1112 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 KATNBL1Q9H079 304 aa24.63■■□□□ 1.53
TRAPPC11-203ENST00000504526 ASTN1O14525 1302 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 CCDC69A6NI79 296 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 ZBTB5O15062 677 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 MYCNP04198 464 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 CALML3P27482 149 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 KIF5BP33176 963 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 ALDH5A1P51649 535 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 CCDC144BQ3MJ40 725 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 SLC30A10Q6XR72 485 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 NFXL1Q6ZNB6 911 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 DNERQ8NFT8 737 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 CTCFLQ8NI51 663 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 RIOX1Q9H6W3 641 aa24.62■■□□□ 1.53
TRAPPC11-203ENST00000504526 B4DLN1 442 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 REC8O95072 547 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 CALM1P0DP23 149 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 CALM2P0DP24 149 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 CALM3P0DP25 149 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 MRPL12P52815 198 aaKnown RBP24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 NUP133Q8WUM0 1156 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 SPC25Q9HBM1 224 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 VTA1Q9NP79 307 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 SMCHD1A6NHR9 2005 aa24.61■■□□□ 1.53
TRAPPC11-203ENST00000504526 ADAMTS4O75173 837 aa24.6■■□□□ 1.53
TRAPPC11-203ENST00000504526 PGK1P00558 417 aa24.6■■□□□ 1.53
TRAPPC11-203ENST00000504526 GNAQP50148 359 aa24.6■■□□□ 1.53
TRAPPC11-203ENST00000504526 C7orf61Q8IZ16 206 aa24.6■■□□□ 1.53
TRAPPC11-203ENST00000504526 EPB41L2O43491 1005 aaKnown RBP24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 HMGB1P09429 215 aaKnown RBP24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 SMARCA1P28370 1054 aa24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 LRRC26Q2I0M4 334 aa24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 DHX32Q7L7V1 743 aaKnown RBP24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 PURBQ96QR8 312 aaKnown RBP24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 LZTS2Q9BRK4 669 aa24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 TSEN34Q9BSV6 310 aaKnown RBP24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 GPHNQ9NQX3 736 aaPredicted RBP24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 PHF24Q9UPV7 400 aa24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 SYNRGQ9UMZ2 1314 aa24.59■■□□□ 1.53
TRAPPC11-203ENST00000504526 TNFAIP2Q03169 654 aa24.58■■□□□ 1.53
TRAPPC11-203ENST00000504526 IQSEC1Q6DN90 963 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms