RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 IGDCC4Q8TDY8 1250 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 MAF1Q9H063 256 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 XPNPEP3Q9NQH7 507 aa20.21■□□□□ 0.83
CTNS-207ENST00000495445 PALM3A6NDB9 673 aaPredicted RBP20.2■□□□□ 0.82
CTNS-207ENST00000495445 ADAMTS4O75173 837 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 DUSP11O75319 330 aaKnown RBP20.2■□□□□ 0.82
CTNS-207ENST00000495445 ANTXR2P58335 489 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 NSMFQ6X4W1 530 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 C7orf61Q8IZ16 206 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 STAG2Q8N3U4 1231 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 KLHDC9Q8NEP7 349 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 SENP2Q9HC62 589 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 MAD2L2Q9UI95 211 aa20.2■□□□□ 0.82
CTNS-207ENST00000495445 MCM3APO60318 1980 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 LOC102724159A0A0B4J2E5 919 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 KBTBD13C9JR72 458 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 IFIT3O14879 490 aaKnown RBP20.19■□□□□ 0.82
CTNS-207ENST00000495445 ADCY6O43306 1168 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 NKX3-2P78367 333 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 PWP2Q15269 919 aaKnown RBP20.19■□□□□ 0.82
CTNS-207ENST00000495445 CCDC144BQ3MJ40 725 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 C1orf53Q5VUE5 145 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 CCSAPQ6IQ19 270 aaPredicted RBP20.19■□□□□ 0.82
CTNS-207ENST00000495445 SLC39A5Q6ZMH5 540 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
CTNS-207ENST00000495445 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 PURBQ96QR8 312 aaKnown RBP20.19■□□□□ 0.82
CTNS-207ENST00000495445 MTA3Q9BTC8 594 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 ZHX1Q9UKY1 873 aaPredicted RBP20.19■□□□□ 0.82
CTNS-207ENST00000495445 PHF24Q9UPV7 400 aa20.19■□□□□ 0.82
CTNS-207ENST00000495445 LCTP09848 1927 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 SLC27A2O14975 620 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 PGK1P00558 417 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 ADCYAP1R1P41586 468 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 TROAPQ12815 778 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 SNX17Q15036 470 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 CHRDL2Q6WN34 429 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 RNF180Q86T96 592 aa20.18■□□□□ 0.82
CTNS-207ENST00000495445 TSEN34Q9BSV6 310 aaKnown RBP20.18■□□□□ 0.82
CTNS-207ENST00000495445 KLRF2D3W0D1 207 aa20.17■□□□□ 0.82
CTNS-207ENST00000495445 GJA9P57773 515 aa20.17■□□□□ 0.82
CTNS-207ENST00000495445 CDC37Q16543 378 aaPredicted RBP20.17■□□□□ 0.82
CTNS-207ENST00000495445 CREB3L3Q68CJ9 461 aa20.17■□□□□ 0.82
CTNS-207ENST00000495445 TAPT1Q6NXT6 567 aa20.17■□□□□ 0.82
CTNS-207ENST00000495445 CHST3Q7LGC8 479 aa20.17■□□□□ 0.82
CTNS-207ENST00000495445 LENG1Q96BZ8 264 aaPredicted RBP20.17■□□□□ 0.82
CTNS-207ENST00000495445 GDF15Q99988 308 aa20.17■□□□□ 0.82
CTNS-207ENST00000495445 UPF3AQ9H1J1 476 aaKnown RBP20.17■□□□□ 0.82
CTNS-207ENST00000495445 RBM27Q9P2N5 1060 aaKnown RBP20.17■□□□□ 0.82
CTNS-207ENST00000495445 CST5P28325 142 aaPredicted RBP20.16■□□□□ 0.82
CTNS-207ENST00000495445 RPS6P62753 249 aaKnown RBP20.16■□□□□ 0.82
CTNS-207ENST00000495445 COL9A3Q14050 684 aaPredicted RBP20.16■□□□□ 0.82
CTNS-207ENST00000495445 GRM4Q14833 912 aa20.16■□□□□ 0.82
CTNS-207ENST00000495445 WTAPQ15007 396 aa20.16■□□□□ 0.82
CTNS-207ENST00000495445 SLC35G1Q2M3R5 365 aa20.16■□□□□ 0.82
CTNS-207ENST00000495445 QRICH1Q2TAL8 776 aa20.16■□□□□ 0.82
CTNS-207ENST00000495445 RNF207Q6ZRF8 634 aa20.16■□□□□ 0.82
CTNS-207ENST00000495445 RIOX1Q9H6W3 641 aa20.16■□□□□ 0.82
CTNS-207ENST00000495445 ADD3Q9UEY8 706 aaKnown RBP20.16■□□□□ 0.82
CTNS-207ENST00000495445 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
CTNS-207ENST00000495445 SYNRGQ9UMZ2 1314 aa20.16■□□□□ 0.82
CTNS-207ENST00000495445 ERICH2A1L162 156 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 PTPDC1A2A3K4 754 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 CTAGE5O15320 804 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 BMP8BP34820 402 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 ALDH5A1P51649 535 aaPredicted RBP20.15■□□□□ 0.82
CTNS-207ENST00000495445 ATN1P54259 1190 aaPredicted RBP20.15■□□□□ 0.82
CTNS-207ENST00000495445 SART3Q15020 963 aaKnown RBP20.15■□□□□ 0.82
CTNS-207ENST00000495445 IQSEC1Q6DN90 963 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 DNERQ8NFT8 737 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 TBC1D5Q92609 795 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 MAP3K14Q99558 947 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 LY9Q9HBG7 655 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 VAT1LQ9HCJ6 419 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 ANO2Q9NQ90 1003 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 ZMYND8Q9ULU4 1186 aaPredicted RBP20.15■□□□□ 0.82
CTNS-207ENST00000495445 GNEQ9Y223 722 aaKnown RBP20.15■□□□□ 0.82
CTNS-207ENST00000495445 ABCB11O95342 1321 aa20.15■□□□□ 0.82
CTNS-207ENST00000495445 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.14■□□□□ 0.81
CTNS-207ENST00000495445 CDC45O75419 566 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 SLC34A2O95436 690 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 EDNRBP24530 442 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 RTP1P59025 263 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 TNFAIP2Q03169 654 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 KCNA10Q16322 511 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 TSGA10IPQ3SY00 556 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 USH1GQ495M9 461 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 TMEM67Q5HYA8 995 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 FERMT2Q96AC1 680 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 VTA1Q9NP79 307 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 PDGFCQ9NRA1 345 aa20.14■□□□□ 0.81
CTNS-207ENST00000495445 RBM47A0AV96 593 aaKnown RBP20.13■□□□□ 0.81
CTNS-207ENST00000495445 MYADML2A6NDP7 307 aa20.13■□□□□ 0.81
CTNS-207ENST00000495445 MOXD2PA6NHM9 499 aa20.13■□□□□ 0.81
CTNS-207ENST00000495445 MYCNP04198 464 aaPredicted RBP20.13■□□□□ 0.81
CTNS-207ENST00000495445 SYN1P17600 705 aa20.13■□□□□ 0.81
CTNS-207ENST00000495445 MCM5P33992 734 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms