RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 PNMA6FA0A0J9YX94 578 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 B4DLN1 442 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 TFRCP02786 760 aaKnown RBP12.96□□□□□ -0.33
TMC1-205ENST00000492418 CAPN2P17655 700 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 SMARCA1P28370 1054 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.33
TMC1-205ENST00000492418 PPP2R5BQ15173 497 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 MTFR1Q15390 333 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 RTN1Q16799 776 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 ZNF792Q3KQV3 632 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 APOA5Q6Q788 366 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 RNF207Q6ZRF8 634 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 NPLOC4Q8TAT6 608 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 PIBF1Q8WXW3 757 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 BRF1Q92994 677 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 MAML3Q96JK9 1138 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 ADD3Q9UEY8 706 aaKnown RBP12.96□□□□□ -0.33
TMC1-205ENST00000492418 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
TMC1-205ENST00000492418 PLXNB2O15031 1838 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 GOLGA8AA7E2F4 631 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 GOLGA8BA8MQT2 603 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 GJB1P08034 283 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 RXRAP19793 462 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 CYP2C19P33261 490 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMC1-205ENST00000492418 CACNB2Q08289 660 aaPredicted RBP12.95□□□□□ -0.34
TMC1-205ENST00000492418 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMC1-205ENST00000492418 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
TMC1-205ENST00000492418 RAB11FIP4Q86YS3 637 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 MSL3Q8N5Y2 521 aaKnown RBP12.95□□□□□ -0.34
TMC1-205ENST00000492418 DEFB118Q96PH6 123 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 PIGSQ96S52 555 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 TINF2Q9BSI4 451 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 UPF3BQ9BZI7 483 aaKnown RBP12.95□□□□□ -0.34
TMC1-205ENST00000492418 MAF1Q9H063 256 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 A1CFQ9NQ94 594 aaKnown RBP12.95□□□□□ -0.34
TMC1-205ENST00000492418 PDRG1Q9NUG6 133 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
TMC1-205ENST00000492418 ASB14A6NK59 587 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 CALML3P27482 149 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 RCAN1P53805 252 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 AKAP17AQ02040 695 aaKnown RBP12.94□□□□□ -0.34
TMC1-205ENST00000492418 BAATQ14032 418 aaPredicted RBP12.94□□□□□ -0.34
TMC1-205ENST00000492418 FBXL16Q8N461 479 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMC1-205ENST00000492418 CYP39A1Q9NYL5 469 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 FLRT1Q9NZU1 646 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 BRPF3Q9ULD4 1205 aa12.94□□□□□ -0.34
TMC1-205ENST00000492418 DNAJC25-GNG10A0A024R161 153 aa12.93□□□□□ -0.34
TMC1-205ENST00000492418 NFIBO00712 420 aa12.93□□□□□ -0.34
TMC1-205ENST00000492418 MSCO60682 206 aa12.93□□□□□ -0.34
TMC1-205ENST00000492418 TRIM32Q13049 653 aa12.93□□□□□ -0.34
TMC1-205ENST00000492418 COL9A3Q14050 684 aaPredicted RBP12.93□□□□□ -0.34
TMC1-205ENST00000492418 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
TMC1-205ENST00000492418 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
TMC1-205ENST00000492418 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
TMC1-205ENST00000492418 NRBP1Q9UHY1 535 aa12.93□□□□□ -0.34
TMC1-205ENST00000492418 ZNF236Q9UL36 1845 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 SYNGAP1Q96PV0 1343 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
TMC1-205ENST00000492418 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 CPLX1O14810 134 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 SGPL1O95470 568 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 SEC24BO95487 1268 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 CFBP00751 764 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
TMC1-205ENST00000492418 GJA8P48165 433 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 CNTN2Q02246 1040 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 C8orf34Q49A92 452 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 MAP3K21Q5TCX8 1036 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 CMTR1Q8N1G2 835 aaKnown RBP12.92□□□□□ -0.34
TMC1-205ENST00000492418 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
TMC1-205ENST00000492418 FAM133AQ8N9E0 248 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
TMC1-205ENST00000492418 CLEC4DQ8WXI8 215 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 CUL5Q93034 780 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
TMC1-205ENST00000492418 PAK6Q9NQU5 681 aaPredicted RBP12.92□□□□□ -0.34
TMC1-205ENST00000492418 MAP3K20Q9NYL2 800 aaKnown RBP12.92□□□□□ -0.34
TMC1-205ENST00000492418 CYTH3O43739 400 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 EN2P19622 333 aaPredicted RBP12.91□□□□□ -0.34
TMC1-205ENST00000492418 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
TMC1-205ENST00000492418 NEK4P51957 841 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 RPS6P62753 249 aaKnown RBP12.91□□□□□ -0.34
TMC1-205ENST00000492418 PDE4DQ08499 809 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 PRAMEF19Q5SWL8 479 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 MAMDC4Q6UXC1 1216 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 HEATR3Q7Z4Q2 680 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 DNERQ8NFT8 737 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 C22orf23Q9BZE7 217 aa12.91□□□□□ -0.34
TMC1-205ENST00000492418 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms