RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 DHX16O60231 1041 aaKnown RBP12.55□□□□□ -0.4
RNF220-210ENST00000474394 IGHA2P01877 340 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 CCND3P30281 292 aaPredicted RBP12.55□□□□□ -0.4
RNF220-210ENST00000474394 KRT32Q14532 448 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 TSGA10IPQ3SY00 556 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 CATIPQ7Z7H3 387 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
RNF220-210ENST00000474394 GUCD1Q96NT3 240 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 NEK1Q96PY6 1258 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 CRISPLD2Q9H0B8 497 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 CPVLQ9H3G5 476 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 SENP2Q9HC62 589 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
RNF220-210ENST00000474394 PFASO15067 1338 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
RNF220-210ENST00000474394 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 EPB41L2O43491 1005 aaKnown RBP12.54□□□□□ -0.4
RNF220-210ENST00000474394 MSCO60682 206 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 CYBAP13498 195 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 CNGA1P29973 690 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 MAGEA10P43363 369 aaPredicted RBP12.54□□□□□ -0.4
RNF220-210ENST00000474394 GRM4Q14833 912 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 CDC37Q16543 378 aaPredicted RBP12.54□□□□□ -0.4
RNF220-210ENST00000474394 MUM1L1Q5H9M0 696 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 FAM109BQ6ICB4 259 aaPredicted RBP12.54□□□□□ -0.4
RNF220-210ENST00000474394 NFXL1Q6ZNB6 911 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 ZNF467Q7Z7K2 595 aaPredicted RBP12.54□□□□□ -0.4
RNF220-210ENST00000474394 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 UBE2OQ9C0C9 1292 aaKnown RBP12.54□□□□□ -0.4
RNF220-210ENST00000474394 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 A1CFQ9NQ94 594 aaKnown RBP12.54□□□□□ -0.4
RNF220-210ENST00000474394 NRBP1Q9UHY1 535 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
RNF220-210ENST00000474394 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 PALM3A6NDB9 673 aaPredicted RBP12.53□□□□□ -0.4
RNF220-210ENST00000474394 CCDC69A6NI79 296 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
RNF220-210ENST00000474394 DDAH1O94760 285 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
RNF220-210ENST00000474394 SYN1P17600 705 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 HSPA4P34932 840 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 LIFRP42702 1097 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 TROAPQ12815 778 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 NSMFQ6X4W1 530 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 ANKLE1Q8NAG6 615 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 NUP133Q8WUM0 1156 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 VAT1LQ9HCJ6 419 aa12.53□□□□□ -0.4
RNF220-210ENST00000474394 DDX20Q9UHI6 824 aaKnown RBP12.53□□□□□ -0.4
RNF220-210ENST00000474394 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
RNF220-210ENST00000474394 KIF5BP33176 963 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 QRICH1Q2TAL8 776 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 USH1GQ495M9 461 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 DHX32Q7L7V1 743 aaKnown RBP12.52□□□□□ -0.41
RNF220-210ENST00000474394 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 FAM133AQ8N9E0 248 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 TRPV1Q8NER1 839 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 CTCFLQ8NI51 663 aaPredicted RBP12.52□□□□□ -0.41
RNF220-210ENST00000474394 SYMPKQ92797 1274 aaKnown RBP12.52□□□□□ -0.41
RNF220-210ENST00000474394 KCNB2Q92953 911 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
RNF220-210ENST00000474394 OGDHLQ9ULD0 1010 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 SYNGAP1Q96PV0 1343 aa12.52□□□□□ -0.41
RNF220-210ENST00000474394 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 NFIBO00712 420 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 SEPT4O43236 478 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 CALM1P0DP23 149 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 CALM2P0DP24 149 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 CALM3P0DP25 149 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 GNAQP50148 359 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 CNTN2Q02246 1040 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 BAATQ14032 418 aaPredicted RBP12.51□□□□□ -0.41
RNF220-210ENST00000474394 COL9A3Q14050 684 aaPredicted RBP12.51□□□□□ -0.41
RNF220-210ENST00000474394 ADCK5Q3MIX3 580 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 LHX8Q68G74 356 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 SYNE3Q6ZMZ3 975 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 DIS3LQ8TF46 1054 aaKnown RBP12.51□□□□□ -0.41
RNF220-210ENST00000474394 CLEC4DQ8WXI8 215 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 MYL10Q9BUA6 226 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 CYP39A1Q9NYL5 469 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 ABCB11O95342 1321 aa12.51□□□□□ -0.41
RNF220-210ENST00000474394 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
RNF220-210ENST00000474394 ASB14A6NK59 587 aa12.5□□□□□ -0.41
RNF220-210ENST00000474394 ZBTB5O15062 677 aa12.5□□□□□ -0.41
RNF220-210ENST00000474394 SNAI1O95863 264 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms