RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 ABHD8Q96I13 439 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 TRERF1Q96PN7 1200 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
APTX-209ENST00000460940 PDRG1Q9NUG6 133 aa12.85□□□□□ -0.35
APTX-209ENST00000460940 PFASO15067 1338 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 DOCK3Q8IZD9 2030 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 CCDC196A0A1B0GTZ2 297 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 GOLGA8AA7E2F4 631 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 ZBTB5O15062 677 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 HMGCRP04035 888 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 APOBRQ0VD83 1088 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 DPP9Q86TI2 863 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 PDCL3Q9H2J4 239 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 ABCB11O95342 1321 aa12.84□□□□□ -0.35
APTX-209ENST00000460940 HTTP42858 3142 aa12.83□□□□□ -0.35
APTX-209ENST00000460940 RXRAP19793 462 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 CYP2B6P20813 491 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
APTX-209ENST00000460940 METAP2P50579 478 aaKnown RBP eCLIP12.83□□□□□ -0.36
APTX-209ENST00000460940 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
APTX-209ENST00000460940 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
APTX-209ENST00000460940 ANKRD1Q15327 319 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 FBXO11Q86XK2 927 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 ANKRD35Q8N283 1001 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.36
APTX-209ENST00000460940 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 VAT1LQ9HCJ6 419 aa12.83□□□□□ -0.36
APTX-209ENST00000460940 DIS3Q9Y2L1 958 aaKnown RBP12.83□□□□□ -0.36
APTX-209ENST00000460940 PNMA6FA0A0J9YX94 578 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 CYTH3O43739 400 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 PLEKHA8P1O95397 391 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 UBXN2AP68543 259 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 OLFML2BQ68BL8 750 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 ZNF333Q96JL9 665 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 SEC63Q9UGP8 760 aaKnown RBP12.82□□□□□ -0.36
APTX-209ENST00000460940 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
APTX-209ENST00000460940 DNAJC25-GNG10A0A024R161 153 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 ELNP15502 786 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 USH1GQ495M9 461 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 HOMER1Q86YM7 354 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 RAB11FIP4Q86YS3 637 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 HOMEZQ8IX15 550 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
APTX-209ENST00000460940 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 SH3TC2Q8TF17 1288 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 TRIB2Q92519 343 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
APTX-209ENST00000460940 PIGSQ96S52 555 aa12.82□□□□□ -0.36
APTX-209ENST00000460940 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
APTX-209ENST00000460940 MRPL11Q9Y3B7 192 aaKnown RBP12.82□□□□□ -0.36
APTX-209ENST00000460940 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 COBLO75128 1261 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 INHAP05111 366 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 ZNF792Q3KQV3 632 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 MUM1L1Q5H9M0 696 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 MFSD14CQ5VZR4 134 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
APTX-209ENST00000460940 MCF2L2Q86YR7 1114 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
APTX-209ENST00000460940 CLEC4DQ8WXI8 215 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 BIN2Q9UBW5 565 aaPredicted RBP12.81□□□□□ -0.36
APTX-209ENST00000460940 CNTNAP5Q8WYK1 1306 aa12.81□□□□□ -0.36
APTX-209ENST00000460940 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 NFIBO00712 420 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 PGK2P07205 417 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
APTX-209ENST00000460940 NPLOC4Q8TAT6 608 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 MAML3Q96JK9 1138 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 FAM217BQ9NTX9 383 aaPredicted RBP12.8□□□□□ -0.36
APTX-209ENST00000460940 CYP39A1Q9NYL5 469 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 PCDHA1Q9Y5I3 950 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
APTX-209ENST00000460940 IGHA2P01877 340 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
APTX-209ENST00000460940 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
APTX-209ENST00000460940 BECN1Q14457 450 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 CCL14Q16627 93 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 MAP3K21Q5TCX8 1036 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 NSMFQ6X4W1 530 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 SAMD3Q8N6K7 520 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 FAM133AQ8N9E0 248 aa12.8□□□□□ -0.36
APTX-209ENST00000460940 RBM27Q9P2N5 1060 aaKnown RBP12.8□□□□□ -0.36
APTX-209ENST00000460940 RBBP6Q7Z6E9 1792 aaKnown RBP12.79□□□□□ -0.36
APTX-209ENST00000460940 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 CDC27P30260 824 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 NEK4P51957 841 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 AK2P54819 239 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 GHRHRQ02643 423 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 FUT2Q10981 343 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
APTX-209ENST00000460940 RNF207Q6ZRF8 634 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 TBC1D32Q96NH3 1257 aa12.79□□□□□ -0.36
APTX-209ENST00000460940 NRBP1Q9UHY1 535 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms