RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 ADAMTS4O75173 837 aa19.29■□□□□ 0.68
SHANK2-213ENST00000460048 PGK1P00558 417 aa19.29■□□□□ 0.68
SHANK2-213ENST00000460048 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
SHANK2-213ENST00000460048 NCOA7Q8NI08 942 aa19.29■□□□□ 0.68
SHANK2-213ENST00000460048 LENG1Q96BZ8 264 aaPredicted RBP19.29■□□□□ 0.68
SHANK2-213ENST00000460048 RBM27Q9P2N5 1060 aaKnown RBP19.29■□□□□ 0.68
SHANK2-213ENST00000460048 ZMYND8Q9ULU4 1186 aaPredicted RBP19.29■□□□□ 0.68
SHANK2-213ENST00000460048 ADCY6O43306 1168 aa19.28■□□□□ 0.68
SHANK2-213ENST00000460048 PARP1P09874 1014 aaKnown RBP19.28■□□□□ 0.68
SHANK2-213ENST00000460048 BAATQ14032 418 aaPredicted RBP19.28■□□□□ 0.68
SHANK2-213ENST00000460048 RNF180Q86T96 592 aa19.28■□□□□ 0.68
SHANK2-213ENST00000460048 ADGRF4Q8IZF3 695 aa19.28■□□□□ 0.68
SHANK2-213ENST00000460048 PHF24Q9UPV7 400 aa19.28■□□□□ 0.68
SHANK2-213ENST00000460048 SYNRGQ9UMZ2 1314 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 DUSP11O75319 330 aaKnown RBP19.27■□□□□ 0.68
SHANK2-213ENST00000460048 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
SHANK2-213ENST00000460048 ADCYAP1R1P41586 468 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 ATN1P54259 1190 aaPredicted RBP19.27■□□□□ 0.68
SHANK2-213ENST00000460048 CDC37Q16543 378 aaPredicted RBP19.27■□□□□ 0.68
SHANK2-213ENST00000460048 CCDC144BQ3MJ40 725 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 SLC39A5Q6ZMH5 540 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 KIAA1211Q6ZU35 1233 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 RALYLQ86SE5 291 aaKnown RBP19.27■□□□□ 0.68
SHANK2-213ENST00000460048 KLHDC9Q8NEP7 349 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 MORC4Q8TE76 937 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 PURBQ96QR8 312 aaKnown RBP19.27■□□□□ 0.68
SHANK2-213ENST00000460048 GDF15Q99988 308 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 LTBP2Q14767 1821 aa19.27■□□□□ 0.68
SHANK2-213ENST00000460048 TRIOBPQ9H2D6 2365 aa19.26■□□□□ 0.67
SHANK2-213ENST00000460048 IFIT3O14879 490 aaKnown RBP19.26■□□□□ 0.67
SHANK2-213ENST00000460048 SYN1P17600 705 aa19.26■□□□□ 0.67
SHANK2-213ENST00000460048 ANTXR2P58335 489 aa19.26■□□□□ 0.67
SHANK2-213ENST00000460048 SNX17Q15036 470 aa19.26■□□□□ 0.67
SHANK2-213ENST00000460048 SLC30A10Q6XR72 485 aa19.26■□□□□ 0.67
SHANK2-213ENST00000460048 MB21D2Q8IYB1 491 aaPredicted RBP19.26■□□□□ 0.67
SHANK2-213ENST00000460048 STAG2Q8N3U4 1231 aa19.26■□□□□ 0.67
SHANK2-213ENST00000460048 BAZ2BQ9UIF8 2168 aaKnown RBP19.26■□□□□ 0.67
SHANK2-213ENST00000460048 LOC102724159A0A0B4J2E5 919 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 RTP1P59025 263 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 NECTIN1Q15223 517 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 PWP2Q15269 919 aaKnown RBP19.25■□□□□ 0.67
SHANK2-213ENST00000460048 C1orf53Q5VUE5 145 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 CCSAPQ6IQ19 270 aaPredicted RBP19.25■□□□□ 0.67
SHANK2-213ENST00000460048 RNF207Q6ZRF8 634 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 FERMT2Q96AC1 680 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 CCDC136Q96JN2 1154 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 TSEN34Q9BSV6 310 aaKnown RBP19.25■□□□□ 0.67
SHANK2-213ENST00000460048 UPF3AQ9H1J1 476 aaKnown RBP19.25■□□□□ 0.67
SHANK2-213ENST00000460048 JMJD4Q9H9V9 463 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 SENP2Q9HC62 589 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 ADD3Q9UEY8 706 aaKnown RBP19.25■□□□□ 0.67
SHANK2-213ENST00000460048 MAD2L2Q9UI95 211 aa19.25■□□□□ 0.67
SHANK2-213ENST00000460048 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
SHANK2-213ENST00000460048 ERICH2A1L162 156 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 PTPDC1A2A3K4 754 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 PALM3A6NDB9 673 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-213ENST00000460048 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-213ENST00000460048 BMP8BP34820 402 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 FXR1P51114 621 aaKnown RBP eCLIP19.24■□□□□ 0.67
SHANK2-213ENST00000460048 ALDH5A1P51649 535 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-213ENST00000460048 GJA9P57773 515 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 RPS6P62753 249 aaKnown RBP19.24■□□□□ 0.67
SHANK2-213ENST00000460048 NKX3-2P78367 333 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 WTAPQ15007 396 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 QRICH1Q2TAL8 776 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 USH1GQ495M9 461 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 CHST3Q7LGC8 479 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 RGS22Q8NE09 1264 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 IGDCC4Q8TDY8 1250 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 MAF1Q9H063 256 aa19.24■□□□□ 0.67
SHANK2-213ENST00000460048 RANBP2P49792 3224 aaKnown RBP19.23■□□□□ 0.67
SHANK2-213ENST00000460048 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.23■□□□□ 0.67
SHANK2-213ENST00000460048 MYADML2A6NDP7 307 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 KLRF2D3W0D1 207 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 SLC27A2O14975 620 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 IRX5P78411 483 aaPredicted RBP19.23■□□□□ 0.67
SHANK2-213ENST00000460048 GRM4Q14833 912 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 TAPT1Q6NXT6 567 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 MTMR8Q96EF0 704 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 KIAA1217Q5T5P2 1943 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 ABCB11O95342 1321 aa19.23■□□□□ 0.67
SHANK2-213ENST00000460048 A0A1W2PPC1 479 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 A0A1W2PQ45 241 aaPredicted RBP19.22■□□□□ 0.67
SHANK2-213ENST00000460048 A0A1W2PQY0 241 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 MOXD2PA6NHM9 499 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 CTAGE5O15320 804 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 CALML3P27482 149 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 MAGEA10P43363 369 aaPredicted RBP19.22■□□□□ 0.67
SHANK2-213ENST00000460048 ACLYP53396 1101 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 TNFAIP2Q03169 654 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 TROAPQ12815 778 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 SART3Q15020 963 aaKnown RBP19.22■□□□□ 0.67
SHANK2-213ENST00000460048 KCNA10Q16322 511 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 TRIM60Q495X7 471 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 CREB3L3Q68CJ9 461 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 MTA3Q9BTC8 594 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 VAT1LQ9HCJ6 419 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 VTA1Q9NP79 307 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 ANO2Q9NQ90 1003 aa19.22■□□□□ 0.67
SHANK2-213ENST00000460048 PDGFCQ9NRA1 345 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms