RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PTGS1P23219 599 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 STAT6P42226 847 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 SEMA3FQ13275 785 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 DHX8Q14562 1220 aaKnown RBP21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 QRICH1Q2TAL8 776 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 BTNL9Q6UXG8 535 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 HSD3B7Q9H2F3 369 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 KCNF1Q9H3M0 494 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 MAGEF1Q9HAY2 307 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 IMPACTQ9P2X3 320 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 LTBP3Q9NS15 1303 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 CBFA2T2O43439 604 aa21.33■■□□□ 1.01
SEMA3D-202ENST00000444867 BMP3P12645 472 aa21.33■■□□□ 1.01
SEMA3D-202ENST00000444867 RRP1BQ14684 758 aaKnown RBP21.33■■□□□ 1.01
SEMA3D-202ENST00000444867 CDC37Q16543 378 aaPredicted RBP21.33■■□□□ 1.01
SEMA3D-202ENST00000444867 PSTPIP2Q9H939 334 aa21.33■■□□□ 1.01
SEMA3D-202ENST00000444867 MYH7BA7E2Y1 1941 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 RAD21O60216 631 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 RPS12P25398 132 aaKnown RBP21.33■■□□□ 1
SEMA3D-202ENST00000444867 JAG1P78504 1218 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 FANCCQ00597 558 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 RRAGBQ5VZM2 374 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 PPP4R3AQ6IN85 833 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.33■■□□□ 1
SEMA3D-202ENST00000444867 VEZTQ9HBM0 779 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 RMND1Q9NWS8 449 aa21.33■■□□□ 1
SEMA3D-202ENST00000444867 OFD1O75665 1012 aa21.32■■□□□ 1
SEMA3D-202ENST00000444867 GCFC2P16383 781 aaKnown RBP21.32■■□□□ 1
SEMA3D-202ENST00000444867 LMOD1P29536 600 aaPredicted RBP21.32■■□□□ 1
SEMA3D-202ENST00000444867 GSDMDP57764 484 aa21.32■■□□□ 1
SEMA3D-202ENST00000444867 SYDE2Q5VT97 1194 aa21.32■■□□□ 1
SEMA3D-202ENST00000444867 TEX2Q8IWB9 1127 aa21.32■■□□□ 1
SEMA3D-202ENST00000444867 IFNKQ9P0W0 207 aa21.32■■□□□ 1
SEMA3D-202ENST00000444867 NFKBIEO00221 500 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 TNNI2P48788 182 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 MAP3K10Q02779 954 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 TRAF1Q13077 416 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 KARSQ15046 597 aaKnown RBP21.31■■□□□ 1
SEMA3D-202ENST00000444867 CALCRLQ16602 461 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 MTMR9Q96QG7 549 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 AMNQ9BXJ7 453 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 XPO4Q9C0E2 1151 aaKnown RBP21.31■■□□□ 1
SEMA3D-202ENST00000444867 MYOZ2Q9NPC6 264 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 NRBP1Q9UHY1 535 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 ZBTB21Q9ULJ3 1066 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 TMX2Q9Y320 296 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 PCDHA1Q9Y5I3 950 aa21.31■■□□□ 1
SEMA3D-202ENST00000444867 FXR2P51116 673 aaKnown RBP eCLIP21.3■■□□□ 1
SEMA3D-202ENST00000444867 ZNF280AP59817 542 aaPredicted RBP21.3■■□□□ 1
SEMA3D-202ENST00000444867 TMEM266Q2M3C6 531 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 CABP7Q86V35 215 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 IGSF22Q8N9C0 903 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 RASSF8Q8NHQ8 419 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 KIAA1524Q8TCG1 905 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 RAB34Q9BZG1 259 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 GOPCQ9HD26 462 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 ATAD5Q96QE3 1844 aa21.3■■□□□ 1
SEMA3D-202ENST00000444867 WNT10BO00744 389 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 AP3B2Q13367 1082 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 UBE2SQ16763 222 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 CCDC144BQ3MJ40 725 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 POTEDQ86YR6 584 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 SH2D4AQ9H788 454 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 FANCLQ9NW38 375 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 PGAP2Q9UHJ9 254 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 A0A1W2PRG0 241 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 TMEM232C9JQI7 657 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 NAALADL2Q58DX5 795 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 FBXO11Q86XK2 927 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 MTRQ99707 1265 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 TMEM39BQ9GZU3 492 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 SPTLC3Q9NUV7 552 aa21.29■■□□□ 1
SEMA3D-202ENST00000444867 PP2D1A8MPX8 630 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 EDIL3O43854 480 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 CDC25AP30304 524 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 UBASH3AP57075 661 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 FMR1Q06787 632 aaKnown RBP eCLIP21.28■■□□□ 1
SEMA3D-202ENST00000444867 CUL4BQ13620 913 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 PDIA5Q14554 519 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 NOLC1Q14978 699 aaKnown RBP eCLIP21.28■■□□□ 1
SEMA3D-202ENST00000444867 KBTBD4Q9NVX7 518 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 NFE2L3Q9Y4A8 694 aa21.28■■□□□ 1
SEMA3D-202ENST00000444867 TDP2O95551 362 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 SERPINC1P01008 464 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 RPN1P04843 607 aaKnown RBP21.27■■□□□ 1
SEMA3D-202ENST00000444867 ATP1A3P13637 1013 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 ZNF18P17022 549 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 CAP2P40123 477 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 USP11P51784 963 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 IKQ13123 557 aaPredicted RBP21.27■■□□□ 1
SEMA3D-202ENST00000444867 TNFAIP1Q13829 316 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 KCNB1Q14721 858 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 ZNF658Q5TYW1 1059 aaPredicted RBP21.27■■□□□ 1
SEMA3D-202ENST00000444867 LRRC8AQ8IWT6 810 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 CALML4Q96GE6 196 aa21.27■■□□□ 1
SEMA3D-202ENST00000444867 NUP88Q99567 741 aaPredicted RBP21.27■■□□□ 1
SEMA3D-202ENST00000444867 PPP1R3GB7ZBB8 358 aa21.26■□□□□ 0.99
SEMA3D-202ENST00000444867 CASP1P29466 404 aa21.26■□□□□ 0.99
SEMA3D-202ENST00000444867 TECP42680 631 aa21.26■□□□□ 0.99
SEMA3D-202ENST00000444867 NBPF9Q3BBW0 867 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms